##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547696_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1470598 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.687646114029803 31.0 31.0 33.0 30.0 34.0 2 32.06098267507504 33.0 31.0 34.0 30.0 34.0 3 32.12035580083748 33.0 31.0 34.0 30.0 34.0 4 35.81394643539567 37.0 35.0 37.0 35.0 37.0 5 35.740807481038324 37.0 35.0 37.0 33.0 37.0 6 35.79445436482302 37.0 35.0 37.0 35.0 37.0 7 36.146870184781974 37.0 35.0 37.0 35.0 37.0 8 36.05570523011727 37.0 35.0 37.0 35.0 37.0 9 37.88535888121703 39.0 38.0 39.0 35.0 39.0 10 37.51949751053653 39.0 37.0 39.0 35.0 39.0 11 37.09663959831307 39.0 37.0 39.0 33.0 39.0 12 36.20907141176583 37.0 35.0 39.0 33.0 39.0 13 35.89095796403912 37.0 35.0 39.0 32.0 39.0 14 36.80807875435707 38.0 35.0 41.0 32.0 41.0 15 37.07455878492967 39.0 35.0 41.0 33.0 41.0 16 37.22825952435676 38.0 35.0 41.0 33.0 41.0 17 37.145307555157835 38.0 35.0 41.0 33.0 41.0 18 37.08542987274564 38.0 35.0 41.0 33.0 41.0 19 37.026519143912886 38.0 35.0 41.0 32.0 41.0 20 36.88562543944708 38.0 35.0 41.0 32.0 41.0 21 36.73620255161506 38.0 35.0 41.0 32.0 41.0 22 36.68403873798278 38.0 35.0 41.0 32.0 41.0 23 36.658987704321646 38.0 35.0 41.0 32.0 41.0 24 36.64332196834213 38.0 35.0 41.0 32.0 41.0 25 36.582471892386636 38.0 35.0 40.0 32.0 41.0 26 36.545094580571984 38.0 35.0 40.0 32.0 41.0 27 36.45326731030506 38.0 35.0 40.0 32.0 41.0 28 36.479587895536376 38.0 35.0 40.0 32.0 41.0 29 36.457650561200275 37.0 35.0 40.0 32.0 41.0 30 36.47508360544486 37.0 35.0 40.0 32.0 41.0 31 36.31329635971217 37.0 35.0 40.0 31.0 41.0 32 36.09378769724969 37.0 35.0 40.0 31.0 41.0 33 36.01008025306712 38.0 35.0 40.0 30.0 41.0 34 35.828471138951635 37.0 35.0 40.0 30.0 41.0 35 35.72588566011922 37.0 35.0 40.0 30.0 41.0 36 35.637040850048756 37.0 35.0 40.0 30.0 41.0 37 35.368913190416414 37.0 34.0 40.0 29.0 41.0 38 35.489624628892464 37.0 35.0 40.0 29.0 41.0 39 35.442675700633345 37.0 35.0 40.0 29.0 41.0 40 35.301596357400186 37.0 34.0 40.0 29.0 41.0 41 35.287483731108026 37.0 34.0 40.0 29.0 41.0 42 35.29433060564478 37.0 34.0 40.0 29.0 41.0 43 35.20079722670641 36.0 34.0 40.0 29.0 41.0 44 35.064240533442856 36.0 34.0 40.0 28.0 41.0 45 35.045901055216994 36.0 34.0 40.0 28.0 41.0 46 34.879394640819584 36.0 34.0 40.0 27.0 41.0 47 34.773821941822305 36.0 34.0 40.0 27.0 41.0 48 34.67466228024246 35.0 34.0 40.0 27.0 41.0 49 34.764118406253786 36.0 34.0 40.0 27.0 41.0 50 34.60474650448321 35.0 34.0 40.0 27.0 41.0 51 33.99337004402291 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 3.0 13 10.0 14 8.0 15 38.0 16 75.0 17 203.0 18 487.0 19 918.0 20 1714.0 21 2779.0 22 4350.0 23 6547.0 24 9579.0 25 14310.0 26 19213.0 27 22649.0 28 24199.0 29 26954.0 30 31537.0 31 39364.0 32 50551.0 33 68375.0 34 135552.0 35 257472.0 36 83712.0 37 109179.0 38 182191.0 39 378536.0 40 91.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.099797497344618 23.52621178595374 30.9746783281359 14.399312388565741 2 29.58361156481921 24.870358860817166 32.19540622250268 13.350623351860943 3 28.459783027040704 24.780123459980224 33.584161001170955 13.175932511808123 4 25.959847626611758 26.407148656532918 32.61843141361541 15.014572303239907 5 24.655412288062408 30.690372215928484 30.700164150910037 13.954051345099069 6 22.087545338698952 40.40077573884909 26.87321756183539 10.638461360616565 7 88.21350226234497 3.6407638253281998 6.6210480362410395 1.5246858760857829 8 90.09504976886954 2.7140659786019024 5.7268539736896145 1.4640302788389485 9 86.94537868268554 4.114652678706213 6.713391423080951 2.2265772155272887 10 55.4705636754572 25.491602735757834 11.155189929538869 7.882643659246103 11 43.453615467993295 19.801468518249038 22.858048222559802 13.886867791197865 12 40.8255009186739 20.5739433890159 24.134399747585675 14.466155944724527 13 23.23524171799499 38.089335086815026 24.055860269087816 14.61956292610217 14 14.362252634642505 41.13619085569272 28.186288843042085 16.31526766662269 15 14.238017459564068 25.497518696475858 45.42070640650946 14.843757437450616 16 17.392176515947934 21.429241709835047 44.621371714091815 16.5572100601252 17 17.969152684826174 21.22068709463769 28.834324540085056 31.97583568045108 18 21.911154509934054 24.135555739909886 34.20445288243286 19.7488368677232 19 27.588776810521974 25.96236360990563 27.22293923968345 19.225920339888944 20 30.085584231720702 24.94311837769397 27.04586841543372 17.925428975151604 21 22.97072347439613 27.76686762799895 30.33208259497157 18.93032630263335 22 22.61821381506027 21.930466381703226 29.442036504877606 26.0092832983589 23 19.138404920991327 28.034785849021965 28.074157587593618 24.752651642393094 24 19.775764688922465 23.98928871112296 38.90920564287453 17.325740957080047 25 17.11671034504331 25.986367450520127 35.60762356537953 21.289298639057037 26 16.339339506785674 35.240426003571336 28.165480981206287 20.254753508436703 27 16.614669678593334 34.93497203178571 31.58320628751025 16.867152002110704 28 14.545919415095085 29.853705771393678 38.86201395622733 16.738360857283908 29 15.035108166881772 25.073609511232846 38.69990303264386 21.191379289241517 30 18.064284053153887 30.07334431299376 34.23865665531981 17.623714978532544 31 28.31861596439 26.03179114890677 27.00119271208039 18.64840017462284 32 28.159973017779162 27.307054681156917 28.156233042612598 16.376739258451323 33 27.592312787043095 27.917078630597892 26.638483120472078 17.852125461886935 34 19.77175271556197 28.449923092510666 29.136922530834397 22.64140166109297 35 18.623988336717446 27.848467086178548 31.558862449153334 21.96868212795067 36 29.257213732100816 23.57245147892218 29.50235210438203 17.667982684594975 37 20.007303151507074 31.04743784501271 30.980730287950887 17.96452871552933 38 19.477858667018452 32.420756726175334 25.995887387307747 22.105497219498464 39 19.543002234465163 30.773603663271675 29.813858035982644 19.869536066280517 40 23.002683262183137 26.398580713424064 27.440061797989664 23.158674226403136 41 18.0546281172693 24.204711280717095 30.00548076360773 27.73517983840587 42 22.265160159336542 24.406737939260083 27.44645375554706 25.88164814585631 43 23.0104352107102 25.50465864906657 27.11617994856514 24.368726191658087 44 19.730748987826722 30.406882098302866 28.75666905571747 21.105699858152942 45 18.106035775922447 37.11687354395966 24.34111837497399 20.435972305143892 46 22.91401185096131 31.666097737111027 26.767750262138257 18.652140149789407 47 21.494929273669623 28.992083492565605 27.291142786811896 22.221844446952872 48 23.519003833814544 25.271352198221404 31.057229779994262 20.152414187969793 49 22.180364722378243 23.44046435531668 32.013575429859145 22.36559549244593 50 20.10087053021968 30.871591012635673 29.284073553751604 19.74346490339304 51 19.623309701223583 32.63475130525133 25.899396028010376 21.842542965514706 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1194.0 1 1727.5 2 2261.0 3 7222.0 4 12183.0 5 8793.0 6 5403.0 7 5765.5 8 6128.0 9 6494.0 10 6860.0 11 6935.0 12 7010.0 13 6806.5 14 6603.0 15 6044.0 16 5485.0 17 5204.5 18 4924.0 19 4892.5 20 4861.0 21 5318.0 22 5775.0 23 6897.0 24 8019.0 25 7656.0 26 9967.5 27 12642.0 28 16971.5 29 21301.0 30 23512.0 31 25723.0 32 28928.0 33 32133.0 34 34656.0 35 37179.0 36 43697.5 37 50216.0 38 58753.0 39 67290.0 40 87485.0 41 107680.0 42 129164.5 43 150649.0 44 151323.0 45 151997.0 46 149694.5 47 147392.0 48 137248.0 49 127104.0 50 115762.5 51 104421.0 52 96586.5 53 88752.0 54 80608.0 55 72464.0 56 63548.5 57 54633.0 58 49507.0 59 44381.0 60 38677.5 61 32974.0 62 28977.5 63 24981.0 64 19974.5 65 14968.0 66 11448.0 67 7928.0 68 6069.5 69 4211.0 70 3265.0 71 2319.0 72 1892.0 73 1465.0 74 1138.5 75 620.0 76 428.0 77 391.5 78 355.0 79 242.0 80 129.0 81 74.5 82 20.0 83 21.5 84 23.0 85 16.5 86 10.0 87 9.5 88 9.0 89 8.5 90 8.0 91 4.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1470598.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.657517878382937 #Duplication Level Percentage of deduplicated Percentage of total 1 82.33550851763259 14.53840713675848 2 6.512737078950538 2.299975428175532 3 1.8922164143394367 1.0023553549790478 4 0.9199797558281396 0.6497823594514297 5 0.541451287700659 0.4780342896423925 6 0.39685909774181544 0.4204527968145016 7 0.2742824202721276 0.33902027177768645 8 0.25229558404305763 0.3563931028701883 9 0.21056971669948307 0.33463246835404376 >10 3.120414562209315 14.244622688338351 >50 1.9930565495544637 26.172556644515826 >100 1.545588210528377 37.970853574258385 >500 0.004265296115356785 0.5339801057117839 >1k 3.877541923051623E-4 0.17192256000029355 >5k 3.877541923051623E-4 0.487011218352086 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7113 0.48368078835956524 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2511 0.17074686624080818 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.046443691613887686 0.0 2 0.0 0.0 0.0 0.16088693171077345 0.0 3 0.0 0.0 0.0 0.211274597136675 0.0 4 0.0 0.0 0.0 0.29063007021633375 0.0 5 0.0 0.0 0.0 0.48191280009900733 0.0 6 0.0 0.0 0.0 0.6205638794558405 0.0 7 0.0 0.0 0.0 0.7180072324319766 0.0 8 0.0 0.0 0.0 0.9332938029291485 0.0 9 0.0 0.0 0.0 1.0025173432848407 0.0 10 0.0 0.0 0.0 1.1969280523977321 0.0 11 0.0 0.0 0.0 1.3946707393862905 0.0 12 0.0 0.0 0.0 1.5777935234510043 0.0 13 0.0 0.0 0.0 1.6412371021856416 0.0 14 0.0 0.0 0.0 1.6678929251909766 0.0 15 0.0 0.0 0.0 1.7131806244806536 0.0 16 0.0 0.0 0.0 1.805796009514497 0.0 17 0.0 0.0 0.0 1.9194912545780696 0.0 18 0.0 0.0 0.0 2.0659622820104473 0.0 19 0.0 0.0 0.0 2.1642896291168627 0.0 20 0.0 0.0 0.0 2.250581056141787 0.0 21 0.0 0.0 0.0 2.3733882407020817 0.0 22 0.0 0.0 0.0 2.498643409007764 0.0 23 0.0 0.0 0.0 2.63668249242825 0.0 24 0.0 0.0 0.0 2.7416737952859993 0.0 25 0.0 0.0 0.0 2.8329291893501827 0.0 26 0.0 0.0 0.0 2.9240485843174002 0.0 27 0.0 0.0 0.0 3.01000001359991 0.0 28 0.0 0.0 0.0 3.098943423015671 0.0 29 0.0 0.0 0.0 3.1996507543189914 0.0 30 0.0 0.0 0.0 3.3335418652820143 0.0 31 0.0 0.0 0.0 3.455737053905962 0.0 32 0.0 0.0 0.0 3.558008374824391 0.0 33 0.0 0.0 0.0 3.662931678133657 0.0 34 0.0 0.0 0.0 3.7676509827974742 0.0 35 0.0 0.0 0.0 3.921873958756914 0.0 36 0.0 0.0 0.0 4.042097160474855 0.0 37 0.0 0.0 0.0 4.1690523174926115 0.0 38 0.0 0.0 0.0 4.2970954672860975 0.0 39 0.0 0.0 0.0 4.461518375517986 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTC 20 7.033929E-4 45.000004 29 ACACGTA 20 7.033929E-4 45.000004 39 GCGAATA 20 7.033929E-4 45.000004 41 CACGCTT 20 7.033929E-4 45.000004 42 TATTACG 20 7.033929E-4 45.000004 1 ATACGTC 20 7.033929E-4 45.000004 26 TCGACCA 20 7.033929E-4 45.000004 20 TGCGTCG 40 6.8175723E-9 45.000004 1 TCGCAAG 50 2.1827873E-11 45.0 1 CGCGAGC 25 3.891339E-5 45.0 37 TACGCTA 25 3.891339E-5 45.0 35 CTTATCG 35 1.2122291E-7 45.0 1 CGCTAAG 25 3.891339E-5 45.0 37 GAACGTA 45 3.8562575E-10 45.0 9 CGTAAAG 25 3.891339E-5 45.0 35 TTACGCG 25 3.891339E-5 45.0 1 CGCGTCA 45 3.8562575E-10 45.0 39 TAGTCGA 25 3.891339E-5 45.0 27 CGAGATC 30 2.165918E-6 44.999996 20 CGTTTTT 4585 0.0 42.988007 1 >>END_MODULE