SRR1547695_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547695_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2219929
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9755	0.43942846820776704	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3912	0.17622185214031622	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGATAAT	35	1.2126111E-7	45.000004	11
TCGTTAG	20	7.03471E-4	45.0	1
TAGACGT	25	3.891984E-5	45.0	27
CGTGATA	55	1.8189894E-12	45.0	39
CGTTGAC	40	6.8193913E-9	45.0	19
CCGCTAT	20	7.03471E-4	45.0	38
CGTTACA	20	7.03471E-4	45.0	13
CTAACCG	25	3.891984E-5	45.0	23
CTCGATA	40	6.8193913E-9	45.0	24
CGTAAGA	25	3.891984E-5	45.0	12
TATAGCG	55	1.8189894E-12	45.0	1
CAGTCGA	20	7.03471E-4	45.0	1
TGAATCG	20	7.03471E-4	45.0	13
GTAACGA	20	7.03471E-4	45.0	20
AATCGAT	20	7.03471E-4	45.0	20
AGTCGAC	25	3.891984E-5	45.0	42
TAACGCG	30	2.16642E-6	44.999996	18
CACGTAT	30	2.16642E-6	44.999996	36
CGTTTTT	7190	0.0	42.715576	1
CTTGACG	165	0.0	42.272728	1