##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547694_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3124517 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.419572689154837 31.0 31.0 33.0 30.0 34.0 2 31.82653478921702 31.0 31.0 34.0 30.0 34.0 3 31.97174731326474 33.0 31.0 34.0 30.0 34.0 4 35.6469700756949 37.0 35.0 37.0 33.0 37.0 5 35.52031081924022 37.0 35.0 37.0 33.0 37.0 6 35.57273556200846 37.0 35.0 37.0 33.0 37.0 7 35.98021134146494 37.0 35.0 37.0 35.0 37.0 8 36.002398130655074 37.0 35.0 37.0 35.0 37.0 9 37.76332661976235 39.0 38.0 39.0 35.0 39.0 10 37.1644971046725 39.0 37.0 39.0 33.0 39.0 11 36.84593938839187 39.0 37.0 39.0 32.0 39.0 12 35.947932752486224 37.0 35.0 39.0 32.0 39.0 13 35.564228327130245 37.0 35.0 39.0 31.0 39.0 14 36.55170671178937 38.0 35.0 41.0 31.0 41.0 15 36.83237921253109 38.0 35.0 41.0 32.0 41.0 16 36.99400227299132 38.0 35.0 41.0 32.0 41.0 17 36.944969094423236 38.0 35.0 41.0 32.0 41.0 18 36.8888634627368 38.0 35.0 41.0 32.0 41.0 19 36.8461611826724 38.0 35.0 41.0 32.0 41.0 20 36.69696436281192 38.0 35.0 41.0 32.0 41.0 21 36.55317445864433 38.0 35.0 40.0 31.0 41.0 22 36.43288450662934 38.0 35.0 40.0 31.0 41.0 23 36.3663843083587 38.0 35.0 40.0 31.0 41.0 24 36.254759055559624 37.0 35.0 40.0 31.0 41.0 25 36.105592000299566 37.0 35.0 40.0 31.0 41.0 26 35.94416096951945 37.0 35.0 40.0 30.0 41.0 27 35.903507326092324 37.0 35.0 40.0 30.0 41.0 28 35.97166121995816 37.0 35.0 40.0 30.0 41.0 29 36.00487915412206 37.0 35.0 40.0 30.0 41.0 30 36.015484313255456 37.0 35.0 40.0 30.0 41.0 31 35.8559988631843 37.0 35.0 40.0 30.0 41.0 32 35.625346253516945 37.0 34.0 40.0 30.0 41.0 33 35.51735196191923 37.0 34.0 40.0 29.0 41.0 34 35.364609954114506 37.0 34.0 40.0 29.0 41.0 35 35.29398623851302 36.0 34.0 40.0 29.0 41.0 36 35.09906555157165 36.0 34.0 40.0 27.0 41.0 37 34.8161808689151 36.0 34.0 40.0 26.0 41.0 38 34.92377797912445 36.0 34.0 40.0 27.0 41.0 39 34.843365870628965 36.0 34.0 40.0 27.0 41.0 40 34.67345896981838 36.0 34.0 40.0 25.0 41.0 41 34.67018326352521 36.0 34.0 40.0 26.0 41.0 42 34.6373717921842 36.0 34.0 40.0 26.0 41.0 43 34.549584143725255 35.0 34.0 40.0 26.0 41.0 44 34.38354824121616 35.0 34.0 40.0 25.0 41.0 45 34.326704255409716 35.0 34.0 40.0 25.0 41.0 46 34.16047664326998 35.0 33.0 40.0 24.0 41.0 47 34.18497258936341 35.0 33.0 40.0 24.0 41.0 48 34.04060723625444 35.0 33.0 40.0 24.0 41.0 49 34.03723103442868 35.0 33.0 39.0 24.0 41.0 50 33.89323245800871 35.0 33.0 39.0 24.0 41.0 51 33.18500299406276 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 7.0 13 13.0 14 40.0 15 116.0 16 307.0 17 779.0 18 1723.0 19 3424.0 20 5478.0 21 8685.0 22 13119.0 23 18671.0 24 26885.0 25 36013.0 26 46392.0 27 54906.0 28 60856.0 29 69732.0 30 82351.0 31 99825.0 32 123449.0 33 162488.0 34 288995.0 35 491350.0 36 224057.0 37 268076.0 38 381399.0 39 654843.0 40 534.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.764301490438363 25.49677278120106 29.188159321904795 13.550766406455782 2 28.882032006866982 27.51010796228665 29.912431265376377 13.695428765469991 3 28.279538885530147 26.24901704807495 31.336619387892593 14.134824678502309 4 24.73300673352073 29.673674363109566 30.419549645593225 15.173769257776481 5 22.723256106463815 33.430447009889846 29.248840700818718 14.597456182827617 6 21.176329013412314 41.77010398727227 26.100354070725174 10.953212928590244 7 88.16770720082496 4.334525944329956 5.853768758499314 1.6439980963457712 8 88.71598394247815 3.4090709059992315 5.2707666496933765 2.6041785018292427 9 83.60831450108928 5.388960917799455 7.9499647465512275 3.0527598345600295 10 52.555322950715265 23.630788374651186 12.312046949976589 11.501841724656963 11 45.3762933599017 20.77559507597494 19.149711779452634 14.698399784670718 12 39.74588712431393 20.740517654408666 23.29678475105112 16.216810470226278 13 22.008905696464446 38.87800898506873 23.789916969566814 15.323168348900007 14 16.808581934423785 39.96163246991455 26.257658383679782 16.97212721198188 15 15.203885912606651 23.094449478111336 45.57216363361121 16.129500975670798 16 16.51288823200514 18.953169401862752 44.03922270226086 20.494719663871248 17 16.998083223743063 19.676897261240697 27.972835481452012 35.35218403356423 18 21.634927894455366 22.19194198655344 33.48869601285575 22.684434106135445 19 28.051503640402657 24.829981721974946 24.4076444455255 22.71087019209689 20 30.150324034082708 22.959740657516026 24.025441372218488 22.864493936182775 21 22.621096316646703 28.24052485552167 26.523267436214944 22.615111391616686 22 24.342514379022422 25.153679752742587 23.662889336175798 26.840916532059193 23 21.25851771649826 29.683435871848353 22.82285550054616 26.23519091110722 24 21.633071607547663 23.33816714711426 36.00822143070433 19.02053981463375 25 18.937679007667423 25.288836642591477 32.71091179852758 23.062572551213513 26 18.65821181321785 32.57322651789061 25.453054024029953 23.31550764486159 27 19.269762334466414 31.08416436844479 26.08137513734123 23.56469815974757 28 16.473970216836715 28.18576439174439 35.56319264705553 19.77707274436337 29 17.03892153571256 23.683788566360818 34.311415172329035 24.96587472559759 30 19.527626189903913 29.07892643887039 29.72427418381785 21.669173187407846 31 28.14844662391019 26.915103998474006 22.925207320043388 22.01124205757242 32 29.45332030518637 26.79959814588943 23.32597326242744 20.42110828649676 33 26.836851903830254 28.08475678000792 22.729081006760403 22.34931030940142 34 20.021686551873458 28.170466027229168 26.652215366407034 25.15563205449034 35 20.42770130551378 27.015439506330097 28.93445610953629 23.62240307861983 36 29.205794047527988 26.05669932344743 23.854502951976258 20.883003677048325 37 21.529247560502952 30.326287230954417 27.445714009557314 20.698751198985317 38 21.839279479036282 31.118601691077373 24.12561685534116 22.916501974545188 39 20.806511854472227 30.69405607330669 25.447581178146894 23.05185089407419 40 24.178489027264057 25.194390044925342 24.820540262703002 25.8065806651076 41 18.291979208306437 23.456905499313972 26.54016604806439 31.710949244315202 42 22.493268559588568 25.81182947636387 23.136279943428057 28.558622020619506 43 22.87524759826879 25.7079094144791 25.643771501323243 25.773071485928867 44 21.672053632609455 29.0447131508646 26.160619385332197 23.12261383119375 45 18.680711290737094 33.54544078332747 22.736922218698123 25.036925707237312 46 22.481042669955066 30.124432032214898 25.874495161972234 21.520030135857798 47 22.30360724553587 26.504352512724367 26.734692114013143 24.457348127726622 48 23.43805458571677 23.41779545446544 28.923190368303324 24.220959591514465 49 21.4744230868323 22.810085526819023 31.15332705823012 24.562164328118556 50 19.802932741284494 30.008990189523693 27.12816092855312 23.0599161406387 51 19.654365778774768 30.466628922166212 25.087141468585383 24.791863830473638 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2215.0 1 2840.5 2 3466.0 3 11499.5 4 19533.0 5 14219.5 6 8906.0 7 9899.5 8 10893.0 9 12269.0 10 13645.0 11 14542.0 12 15439.0 13 15316.0 14 15193.0 15 14792.0 16 14391.0 17 14233.0 18 14075.0 19 13774.0 20 13473.0 21 13381.5 22 13290.0 23 12728.0 24 12166.0 25 12878.0 26 15139.5 27 16689.0 28 19633.5 29 22578.0 30 28438.0 31 34298.0 32 40899.0 33 47500.0 34 60786.0 35 74072.0 36 75138.0 37 76204.0 38 92010.0 39 107816.0 40 142249.0 41 176682.0 42 219164.0 43 261646.0 44 266367.5 45 271089.0 46 272697.0 47 274305.0 48 267626.5 49 260948.0 50 250820.0 51 240692.0 52 225293.0 53 209894.0 54 188534.0 55 167174.0 56 154966.5 57 142759.0 58 139513.5 59 136268.0 60 126695.5 61 117123.0 62 104749.0 63 92375.0 64 79069.0 65 65763.0 66 58521.5 67 51280.0 68 43453.0 69 35626.0 70 29839.5 71 24053.0 72 21305.5 73 18558.0 74 15244.5 75 9941.0 76 7951.0 77 6322.0 78 4693.0 79 3519.0 80 2345.0 81 1711.0 82 1077.0 83 767.0 84 457.0 85 326.5 86 196.0 87 173.5 88 151.0 89 92.0 90 33.0 91 23.0 92 13.0 93 6.5 94 0.0 95 1.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3124517.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.574932644526253 #Duplication Level Percentage of deduplicated Percentage of total 1 81.57959809964436 15.153355398684159 2 7.465076713310586 2.773265942719311 3 2.321930142354777 1.2938908799860573 4 1.159154662220904 0.8612487910136748 5 0.6540275871731833 0.6074259189701952 6 0.4856268965164199 0.5412292135897693 7 0.3436865276158495 0.4468767870906862 8 0.28102601440255176 0.4176031431109651 9 0.23430433140599607 0.39169684567684204 >10 2.6641626952470654 11.964206916798268 >50 1.2717466362155558 17.3856676752712 >100 1.531435586880006 46.14768855005038 >500 0.005774373009032486 0.6832697190374796 >1k 0.0020997720032845404 0.7169099130819944 >5k 1.749810002737117E-4 0.22673815812032427 >10k+ 1.749810002737117E-4 0.38892614679870996 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11966 0.38297119202743973 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6976 0.22326650807148754 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 4110 0.1315403308735398 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.200494668455957E-5 0.0 0.0 0.052872171922892404 0.0 2 3.200494668455957E-5 0.0 0.0 0.20028695635197377 0.0 3 3.200494668455957E-5 0.0 0.0 0.3043350380234769 0.0 4 3.200494668455957E-5 0.0 0.0 0.5804417130711723 0.0 5 3.200494668455957E-5 0.0 0.0 0.9811756505085426 0.0 6 3.200494668455957E-5 0.0 0.0 1.7168733599465134 0.0 7 3.200494668455957E-5 0.0 0.0 2.046588320690846 0.0 8 3.200494668455957E-5 0.0 0.0 2.8890545322685073 0.0 9 3.200494668455957E-5 0.0 0.0 3.2614960968367273 0.0 10 6.400989336911914E-5 0.0 0.0 3.8052921459540787 0.0 11 6.400989336911914E-5 0.0 0.0 4.252209221457268 0.0 12 6.400989336911914E-5 0.0 0.0 4.623786652465005 0.0 13 6.400989336911914E-5 0.0 0.0 4.815048213851933 0.0 14 6.400989336911914E-5 0.0 0.0 4.895220605296755 0.0 15 6.400989336911914E-5 0.0 0.0 4.9811858920914815 0.0 16 6.400989336911914E-5 0.0 0.0 5.126744389612859 0.0 17 6.400989336911914E-5 0.0 0.0 5.286641103248918 0.0 18 6.400989336911914E-5 0.0 0.0 5.5413044640179585 0.0 19 6.400989336911914E-5 0.0 0.0 5.642984179634804 0.0 20 1.2801978673823827E-4 0.0 0.0 5.75266513192279 0.0 21 1.2801978673823827E-4 0.0 0.0 5.906000831488515 0.0 22 2.2403462679191697E-4 0.0 0.0 6.063305144443125 0.0 23 2.2403462679191697E-4 0.0 0.0 6.241604702422807 0.0 24 2.5603957347647654E-4 0.0 0.0 6.3902676797725855 0.0 25 2.5603957347647654E-4 0.0 0.0 6.509710140799362 0.0 26 2.5603957347647654E-4 0.0 0.0 6.626880250611535 0.0 27 2.5603957347647654E-4 0.0 0.0 6.739473653047815 0.0 28 2.5603957347647654E-4 0.0 0.0 6.851490966443774 0.0 29 2.5603957347647654E-4 0.0 0.0 6.970069293910067 0.0 30 2.5603957347647654E-4 0.0 0.0 7.150513183317614 0.0 31 3.840593602147148E-4 0.0 0.0 7.284133835725649 0.0 32 3.840593602147148E-4 0.0 0.0 7.398743549803058 0.0 33 3.840593602147148E-4 0.0 0.0 7.519850268057431 0.0 34 4.1606430689927434E-4 0.0 0.0 7.650526465370488 0.0 35 4.1606430689927434E-4 0.0 0.0 7.81746426727715 0.0 36 4.1606430689927434E-4 0.0 0.0 7.9621906361847286 0.0 37 4.1606430689927434E-4 0.0 0.0 8.106628960572147 0.0 38 4.1606430689927434E-4 0.0 0.0 8.248698918904905 0.0 39 4.1606430689927434E-4 0.0 0.0 8.385104001674499 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGATA 25 3.8923507E-5 45.0 8 ACGTTAC 20 7.035151E-4 45.0 35 CGTAGAT 25 3.8923507E-5 45.0 21 ACGTACT 20 7.035151E-4 45.0 19 TATACGA 20 7.035151E-4 45.0 12 TATCCGT 40 6.8212103E-9 45.0 20 GTCGAAT 30 2.1667056E-6 44.999996 38 CCGCGTA 30 2.1667056E-6 44.999996 19 TATAGCG 255 0.0 43.235294 1 TACGTAG 115 0.0 43.043476 1 AACGTTC 95 0.0 42.63158 40 CGTTAGG 440 0.0 41.931816 2 CGGTCTA 335 0.0 40.97015 31 CGTTTTT 8985 0.0 40.96828 1 ATACGTT 50 1.0822987E-9 40.5 12 ATAGGGC 1395 0.0 40.322582 4 TAGCATA 985 0.0 40.203045 30 CGTTTCA 45 1.9301297E-8 40.0 33 ACGAACT 45 1.9301297E-8 40.0 20 CGAATAT 510 0.0 39.705883 14 >>END_MODULE