SRR1547693_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547693_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	719442
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3507	0.4874611156979992	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2604	0.36194717572785573	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGTACG	60	0.0	45.000004	7
GTTACAC	30	2.1643646E-6	45.000004	33
CATACTA	30	2.1643646E-6	45.000004	36
TAAATCG	30	2.1643646E-6	45.000004	1
TTACCTT	30	2.1643646E-6	45.000004	33
TGCCGAC	30	2.1643646E-6	45.000004	43
CTTAAAT	20	7.031525E-4	45.0	19
AGCGTGA	20	7.031525E-4	45.0	24
CTATGCG	25	3.889346E-5	45.0	1
TTGGAAC	25	3.889346E-5	45.0	26
ACGTTGC	20	7.031525E-4	45.0	39
GTTTACG	40	6.8084773E-9	45.0	1
CTGAGTC	20	7.031525E-4	45.0	38
CCGTCAA	20	7.031525E-4	45.0	31
TCCAGTA	35	1.2110831E-7	45.0	31
CTAACCG	25	3.889346E-5	45.0	31
TACGAAG	20	7.031525E-4	45.0	1
CGCTAAC	25	3.889346E-5	45.0	29
TGTTAAT	25	3.889346E-5	45.0	45
ACTAACT	25	3.889346E-5	45.0	10