##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547691_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1312090 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.558693382313713 31.0 31.0 33.0 30.0 34.0 2 31.981208606116958 31.0 31.0 34.0 30.0 34.0 3 32.13405863927017 33.0 31.0 34.0 30.0 34.0 4 35.80440747204841 37.0 35.0 37.0 35.0 37.0 5 35.702259753523 37.0 35.0 37.0 33.0 37.0 6 35.76077022155492 37.0 35.0 37.0 33.0 37.0 7 36.08604440244191 37.0 35.0 37.0 35.0 37.0 8 36.09588061794542 37.0 35.0 37.0 35.0 37.0 9 37.88347902963974 39.0 38.0 39.0 35.0 39.0 10 37.313596628280074 39.0 37.0 39.0 34.0 39.0 11 37.047940308972706 39.0 37.0 39.0 33.0 39.0 12 36.3658361850178 38.0 35.0 39.0 32.0 39.0 13 36.080410642562626 38.0 35.0 39.0 32.0 39.0 14 37.138466873461425 39.0 35.0 41.0 32.0 41.0 15 37.33677186778346 39.0 35.0 41.0 33.0 41.0 16 37.437819814189574 39.0 35.0 41.0 33.0 41.0 17 37.38481887675388 39.0 35.0 41.0 33.0 41.0 18 37.29219413302441 39.0 35.0 41.0 32.0 41.0 19 37.26956153922368 39.0 35.0 41.0 32.0 41.0 20 37.1671920371316 39.0 35.0 41.0 32.0 41.0 21 37.05855238588816 39.0 35.0 41.0 32.0 41.0 22 36.94306716764856 38.0 35.0 41.0 32.0 41.0 23 36.86667530428553 38.0 35.0 41.0 32.0 41.0 24 36.76345601292594 38.0 35.0 41.0 32.0 41.0 25 36.63026774077998 38.0 35.0 40.0 31.0 41.0 26 36.48833311739286 38.0 35.0 40.0 31.0 41.0 27 36.44525527974453 38.0 35.0 40.0 31.0 41.0 28 36.48154699753828 38.0 35.0 40.0 31.0 41.0 29 36.51075002476964 38.0 35.0 40.0 31.0 41.0 30 36.528991913664456 38.0 35.0 40.0 31.0 41.0 31 36.41535565395667 38.0 35.0 40.0 31.0 41.0 32 36.2373739606277 38.0 35.0 41.0 31.0 41.0 33 36.154400231691426 38.0 35.0 41.0 30.0 41.0 34 36.0048106456112 38.0 35.0 40.0 30.0 41.0 35 35.90628691629385 38.0 35.0 40.0 30.0 41.0 36 35.75888315588107 38.0 35.0 40.0 30.0 41.0 37 35.510777461911914 38.0 34.0 40.0 29.0 41.0 38 35.58296001036514 37.0 34.0 40.0 29.0 41.0 39 35.48036110327798 37.0 34.0 40.0 29.0 41.0 40 35.329247993658974 37.0 34.0 40.0 28.0 41.0 41 35.29794602504401 37.0 34.0 40.0 28.0 41.0 42 35.25138443247033 37.0 34.0 40.0 28.0 41.0 43 35.15748691019671 37.0 34.0 40.0 28.0 41.0 44 35.02566897087852 36.0 34.0 40.0 27.0 41.0 45 34.95813549375424 36.0 34.0 40.0 27.0 41.0 46 34.79603457079926 36.0 34.0 40.0 27.0 41.0 47 34.81996814242925 36.0 34.0 40.0 27.0 41.0 48 34.67226943273708 35.0 34.0 40.0 27.0 41.0 49 34.65292243672309 36.0 34.0 40.0 27.0 41.0 50 34.50630520772203 35.0 34.0 40.0 26.0 41.0 51 33.80735772698519 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 2.0 13 4.0 14 8.0 15 37.0 16 100.0 17 186.0 18 457.0 19 890.0 20 1583.0 21 2580.0 22 3949.0 23 5816.0 24 8610.0 25 11863.0 26 15401.0 27 18289.0 28 20957.0 29 24638.0 30 30080.0 31 36842.0 32 46961.0 33 63075.0 34 112406.0 35 184191.0 36 99133.0 37 125444.0 38 183361.0 39 315052.0 40 173.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.784793726040135 23.900189773567362 30.073470569854198 13.241545930538301 2 30.075375926956234 25.995930157230067 29.995427142955133 13.933266772858568 3 28.97286009343871 25.91392358755878 31.390072327355593 13.723143991646914 4 25.37211624202608 29.29052122948883 30.457133275918576 14.880229252566515 5 23.454336211692794 32.913976937557635 29.384188584624532 14.247498266125035 6 21.4150706125342 42.65431487169325 25.294758743683744 10.635855772088805 7 89.70421236348116 3.776341561935538 5.0728227484395125 1.446623326143786 8 90.69728448505819 2.9772347933449685 4.417303691057778 1.9081770305390637 9 85.58429680890792 4.467452689983157 6.989078493091175 2.9591720080177426 10 48.80831345410757 21.352193828167277 14.3768339062107 15.462658811514455 11 42.3016713792499 23.11503021896364 19.31079422905441 15.272504172732054 12 37.319010128878354 21.934013672842564 22.629164157946484 18.1178120403326 13 23.349312928229008 33.739530062724356 24.844789610468794 18.066367398577842 14 19.657188150203112 35.59595759437234 26.35718586377459 18.389668391649963 15 18.371986677743145 22.97593915051559 40.968759764955145 17.683314406786117 16 20.4957739179477 20.39936284858508 39.310336943349924 19.794526290117293 17 21.55606703808428 21.24816133039654 26.284858508181603 30.910913123337576 18 24.29398897941452 24.037375484913383 29.85732686020014 21.811308675471956 19 28.739339527014153 24.997751678619608 24.502816117796797 21.760092676569442 20 30.269036422806362 24.623691972349455 23.44496185475082 21.66230975009336 21 25.734438948547737 27.097378990770448 25.865908588587672 21.30227347209414 22 25.51722823891654 24.724066184484297 25.03890739202341 24.719798184575755 23 23.576507709074836 29.242277587665484 23.529178638660458 23.652036064599226 24 24.021065628120024 25.39040767020555 31.174995617678665 19.413531083995764 25 21.698740177884137 25.427905097973465 30.327264135844338 22.54609058829806 26 21.080489905418073 30.317127636061553 26.150568939630663 22.45181351888971 27 21.641350821971052 29.221471088111333 27.20606055987013 21.93111753004748 28 19.411625726893732 27.75846169089011 32.647303157557786 20.182609424658366 29 20.28930942237194 25.018558178173755 32.287800379547136 22.404332019907173 30 22.15236759673498 27.39057534163053 29.870511931346172 20.586545130288318 31 27.955932900944298 25.842587017658854 24.51226668902286 21.689213392374 32 28.96958287922322 25.71096494905075 25.286146529582577 20.03330564214345 33 27.541632052679315 26.526762645855083 24.83556768209498 21.096037619370623 34 22.475135089818536 26.324261293051542 28.343634964064968 22.856968653064957 35 22.60050758713198 26.278837579739196 29.11256087615941 22.008093956969415 36 29.286634301000692 24.632837686439192 25.79632494722161 20.284203065338506 37 23.78868827595668 29.007232735559295 26.865839995732 20.33823899275202 38 23.950110129640496 29.996646571500428 23.897598487908603 22.155644810950466 39 22.794930225822924 29.59735993719943 25.367772027833457 22.239937809144187 40 24.809654825507398 25.97512365767592 25.48697116813633 23.728250348680348 41 20.729142055804097 24.88182975253222 26.20460486704418 28.1844233246195 42 23.796462132932955 26.919799708861436 24.032345342164028 25.251392816041584 43 23.02090557812345 26.656403143077075 26.169546296366864 24.153144982432607 44 22.789519011653166 28.52662546014374 26.449786218933152 22.234069309269945 45 20.849331981800027 30.98796576454359 24.151544482466907 24.011157771189477 46 23.480706353984864 28.361392892255864 26.824989139464517 21.33291161429475 47 23.404110998483336 26.003399157070017 27.304148343482538 23.288341500964112 48 25.18676310314079 23.430328712207242 28.290132536640016 23.09277564801195 49 22.908489509103795 23.696850063638927 29.2490606589487 24.145599768308575 50 21.905509530596223 28.954644879543324 26.50748043198256 22.63236515787789 51 21.288402472391375 30.596071915798458 24.24574533759117 23.869780274218993 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 953.0 1 1292.0 2 1631.0 3 4973.5 4 8316.0 5 5914.0 6 3512.0 7 3796.0 8 4080.0 9 4473.5 10 4867.0 11 5210.5 12 5554.0 13 5832.0 14 6110.0 15 6064.5 16 6019.0 17 5554.0 18 5089.0 19 4784.0 20 4479.0 21 4476.5 22 4474.0 23 4612.0 24 4750.0 25 5638.5 26 6607.0 27 6687.0 28 8305.0 29 9923.0 30 12724.0 31 15525.0 32 17354.0 33 19183.0 34 21734.0 35 24285.0 36 26317.5 37 28350.0 38 36166.0 39 43982.0 40 58045.0 41 72108.0 42 86860.0 43 101612.0 44 106095.5 45 110579.0 46 111465.5 47 112352.0 48 107198.0 49 102044.0 50 97703.5 51 93363.0 52 91561.0 53 89759.0 54 83667.5 55 77576.0 56 70994.5 57 64413.0 58 63953.5 59 63494.0 60 58945.5 61 54397.0 62 49647.5 63 44898.0 64 40200.0 65 35502.0 66 30094.0 67 24686.0 68 21230.0 69 17774.0 70 14943.0 71 12112.0 72 10810.5 73 9509.0 74 7305.5 75 4291.5 76 3481.0 77 2403.0 78 1325.0 79 1146.0 80 967.0 81 701.0 82 435.0 83 286.5 84 138.0 85 114.0 86 90.0 87 69.5 88 49.0 89 31.5 90 14.0 91 10.5 92 7.0 93 6.0 94 5.0 95 3.0 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1312090.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.063088993414706 #Duplication Level Percentage of deduplicated Percentage of total 1 77.92306952210373 16.413005479841118 2 5.618874013245822 2.36701686767564 3 2.072614852169785 1.3096701324097575 4 1.2140993130511595 1.0229072751056092 5 0.9190913978010248 0.9679451952482451 6 0.7236003849678004 0.9144755582547552 7 0.5969038660380046 0.8800847475610246 8 0.48498307705678084 0.817219336987766 9 0.432298593839166 0.8194989378386154 >10 7.856126834592722 42.1650847287794 >50 2.034077930333986 28.333046388404064 >100 0.12207381805866739 3.2672549877738355 >500 0.0014575978275661022 0.184669599243176 >1k 7.287989137830511E-4 0.5381207648769356 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4890 0.37268784915668896 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2121 0.16165049653606078 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.621428408112249E-5 0.0 0.0 0.028808999382664298 0.0 2 7.621428408112249E-5 0.0 0.0 0.09214306945407709 0.0 3 7.621428408112249E-5 0.0 0.0 0.13954835415253528 0.0 4 7.621428408112249E-5 0.0 0.0 0.2624057800913047 0.0 5 7.621428408112249E-5 0.0 0.0 0.4200931338551471 0.0 6 7.621428408112249E-5 0.0 0.0 0.8660991242978759 0.0 7 7.621428408112249E-5 0.0 0.0 1.0667713342834715 0.0 8 7.621428408112249E-5 0.0 0.0 1.6623097500933626 0.0 9 7.621428408112249E-5 0.0 0.0 1.9878971716879177 0.0 10 7.621428408112249E-5 0.0 0.0 2.4486125189583032 0.0 11 7.621428408112249E-5 0.0 0.0 2.7707702977692077 0.0 12 7.621428408112249E-5 0.0 0.0 3.0398067205755703 0.0 13 7.621428408112249E-5 0.0 0.0 3.197570288623494 0.0 14 7.621428408112249E-5 0.0 0.0 3.272870001295643 0.0 15 7.621428408112249E-5 0.0 0.0 3.3349084285376764 0.0 16 7.621428408112249E-5 0.0 0.0 3.431776783604783 0.0 17 7.621428408112249E-5 0.0 0.0 3.5281116386833222 0.0 18 7.621428408112249E-5 0.0 0.0 3.6784824211753766 0.0 19 7.621428408112249E-5 0.0 0.0 3.7566782766426083 0.0 20 2.2864285224336744E-4 0.0 0.0 3.8376940606208416 0.0 21 2.2864285224336744E-4 0.0018291428179469395 0.0 3.935095915676516 0.0 22 2.2864285224336744E-4 0.0018291428179469395 0.0 4.041872127674169 0.0 23 2.2864285224336744E-4 0.0018291428179469395 0.0 4.16213826795418 0.0 24 2.2864285224336744E-4 0.0018291428179469395 0.0 4.2583969087486375 0.0 25 2.2864285224336744E-4 0.0018291428179469395 0.0 4.3468816925668206 0.0 26 2.2864285224336744E-4 0.0018291428179469395 0.0 4.438415047748249 0.0 27 2.2864285224336744E-4 0.0018291428179469395 0.0 4.52811926011173 0.0 28 2.2864285224336744E-4 0.0018291428179469395 0.0 4.616222972509508 0.0 29 3.0485713632448996E-4 0.0018291428179469395 0.0 4.721246255973295 0.0 30 3.0485713632448996E-4 0.0018291428179469395 0.0 4.865062610034372 0.0 31 3.0485713632448996E-4 0.0018291428179469395 0.0 4.95857753660191 0.0 32 3.810714204056124E-4 0.0018291428179469395 0.0 5.0581133916118555 0.0 33 3.810714204056124E-4 0.0018291428179469395 0.0 5.148427318247986 0.0 34 3.810714204056124E-4 0.0018291428179469395 0.0 5.240570387702063 0.0 35 3.810714204056124E-4 0.0018291428179469395 0.0 5.355044242391909 0.0 36 3.810714204056124E-4 0.0018291428179469395 0.0 5.457247597344694 0.0 37 3.810714204056124E-4 0.0018291428179469395 0.0 5.56082280941094 0.0 38 3.810714204056124E-4 0.0018291428179469395 0.0 5.673162664146514 0.0 39 3.810714204056124E-4 0.0018291428179469395 0.0 5.812863446867212 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGATA 25 3.891108E-5 45.000004 10 CCAATCG 20 7.0336525E-4 45.0 19 ACGTACA 20 7.0336525E-4 45.0 34 ACACGAT 30 2.165738E-6 44.999996 16 TACGGGA 250 0.0 42.300003 4 TACGTAG 65 0.0 41.53846 1 AGTACGG 120 0.0 41.249996 2 TATTGCG 55 6.184564E-11 40.909092 1 GCGATAC 55 6.184564E-11 40.909092 9 ATTGCGG 185 0.0 40.135136 2 TCGATAG 45 1.9286745E-8 40.0 1 TTACGGG 415 0.0 39.578316 3 CGTTTTT 3150 0.0 39.57143 1 ACGTAAG 80 0.0 39.375 1 AGGGCGA 1765 0.0 38.75354 6 TCACGAC 35 6.2489653E-6 38.57143 25 TACCCGA 35 6.2489653E-6 38.57143 41 ACGTAGG 210 0.0 38.57143 2 ATAGGGC 1000 0.0 38.025 4 TAGCATA 475 0.0 37.89474 30 >>END_MODULE