##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547689_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2312419 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.42349202285572 31.0 31.0 33.0 30.0 34.0 2 31.836824554719538 31.0 31.0 34.0 30.0 34.0 3 31.94562706845083 31.0 31.0 34.0 30.0 34.0 4 35.67043559147369 37.0 35.0 37.0 33.0 37.0 5 35.56332438022694 37.0 35.0 37.0 33.0 37.0 6 35.60701758634573 37.0 35.0 37.0 33.0 37.0 7 35.99116596084014 37.0 35.0 37.0 35.0 37.0 8 35.99521669731999 37.0 35.0 37.0 35.0 37.0 9 37.73535721683657 39.0 37.0 39.0 35.0 39.0 10 37.1408896917038 39.0 37.0 39.0 33.0 39.0 11 36.89627485330297 39.0 37.0 39.0 32.0 39.0 12 36.488816689362956 39.0 35.0 39.0 32.0 39.0 13 36.35848261063415 39.0 35.0 39.0 32.0 39.0 14 37.43628944408431 40.0 36.0 41.0 32.0 41.0 15 37.54044357878049 40.0 36.0 41.0 32.0 41.0 16 37.57554145680346 40.0 35.0 41.0 32.0 41.0 17 37.47576498895745 39.0 35.0 41.0 32.0 41.0 18 37.31726949138543 39.0 36.0 41.0 32.0 41.0 19 37.22795566028475 39.0 35.0 41.0 32.0 41.0 20 37.078953251984174 39.0 35.0 41.0 32.0 41.0 21 36.95428380410298 39.0 35.0 41.0 31.0 41.0 22 36.869825926875706 38.0 35.0 41.0 31.0 41.0 23 36.75094089782172 38.0 35.0 41.0 31.0 41.0 24 36.60396796601308 38.0 35.0 40.0 31.0 41.0 25 36.4715110021151 38.0 35.0 40.0 31.0 41.0 26 36.30740882167116 38.0 35.0 40.0 30.0 41.0 27 36.286618039377814 38.0 35.0 40.0 30.0 41.0 28 36.27767761811332 38.0 35.0 40.0 30.0 41.0 29 36.22018760440906 38.0 35.0 40.0 30.0 41.0 30 36.1962010345011 38.0 35.0 40.0 30.0 41.0 31 36.05069539733067 38.0 35.0 40.0 30.0 41.0 32 35.77872824950842 38.0 35.0 40.0 29.0 41.0 33 35.547795187636844 38.0 35.0 40.0 27.0 41.0 34 35.218286997295905 38.0 34.0 40.0 25.0 41.0 35 35.042587437657275 38.0 34.0 40.0 24.0 41.0 36 34.88697333830936 38.0 34.0 40.0 24.0 41.0 37 34.646520375416394 38.0 34.0 40.0 23.0 41.0 38 34.68186950548322 37.0 34.0 40.0 23.0 41.0 39 34.540567691235886 37.0 34.0 40.0 23.0 41.0 40 34.38120773095187 37.0 33.0 40.0 23.0 41.0 41 34.28563768071444 37.0 33.0 40.0 23.0 41.0 42 34.244803817993194 37.0 33.0 40.0 23.0 41.0 43 34.144699554881704 37.0 33.0 40.0 22.0 41.0 44 33.96861295465917 36.0 33.0 40.0 22.0 41.0 45 33.89436429989548 36.0 33.0 40.0 22.0 41.0 46 33.6926370177723 36.0 33.0 40.0 21.0 41.0 47 33.70537043675908 35.0 33.0 40.0 22.0 41.0 48 33.52936383933881 35.0 33.0 40.0 20.0 41.0 49 33.48444550922648 35.0 33.0 40.0 20.0 41.0 50 33.341605911385436 35.0 33.0 39.0 20.0 41.0 51 32.65444973423934 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 6.0 13 9.0 14 41.0 15 99.0 16 268.0 17 638.0 18 1408.0 19 2657.0 20 4589.0 21 7259.0 22 10449.0 23 15144.0 24 21635.0 25 32071.0 26 44406.0 27 51663.0 28 53417.0 29 55658.0 30 61586.0 31 71810.0 32 85760.0 33 108191.0 34 170119.0 35 233100.0 36 191968.0 37 238061.0 38 331677.0 39 518442.0 40 286.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.29970952496066 23.533883781442725 24.85427597680178 17.312130716794837 2 35.221471541273445 24.80246875674348 25.836104961946777 14.1399547400363 3 28.25132469504878 25.26566335945172 32.348895247790296 14.134116697709196 4 24.993826810798563 27.898101511879986 32.04081959195111 15.067252085370342 5 23.079467864604123 30.657117070911454 31.14755587114619 15.115859193338233 6 21.337006831374417 39.85670416996228 28.499419871571718 10.306869127091586 7 84.91164447273613 3.6638688749746477 9.747108979817238 1.677377672471987 8 84.8967682759915 3.28629889306393 9.634542874799074 2.182389956145491 9 79.6119128929489 4.972930943743327 11.873972666718272 3.541183496589502 10 42.0610192184029 25.425279761150556 18.719834078512587 13.793866941933967 11 33.52052547570315 25.784081518098578 24.74188285081553 15.95351015538274 12 29.347752288836926 22.661031586403674 29.377288458536277 18.61392766622312 13 24.192847403519863 26.242129994607378 31.121176568779273 18.443846033093482 14 21.32113600519629 27.783848861300655 31.872251525350727 19.022763608152328 15 21.20251563406113 22.90514824519259 36.992128156705164 18.90020796404112 16 23.92455692502094 21.830256540877755 35.39259104859457 18.852595485506736 17 23.821547911516035 21.952206758377265 30.62918095725731 23.59706437284938 18 25.736512284322178 22.240216846514407 31.47638901081508 20.546881858348335 19 27.945238298076603 24.393243611992464 27.54608918193459 20.115428907996343 20 29.79351925407982 23.65799623684116 26.989096699170865 19.559387809908152 21 26.91125613480948 25.146697030252735 28.531507481991802 19.410539352945985 22 26.574855162494345 22.569049986183302 28.70033501714006 22.1557598341823 23 25.080489305787573 25.626670599056663 27.854467551079626 21.438372544076138 24 24.074183787626723 23.597626554703105 32.19991705655419 20.128272601115974 25 24.230383853445243 24.146272799176966 30.04481454269317 21.57852880468462 26 22.384048911551062 26.120612224687655 28.987826168181456 22.507512695579823 27 22.55590357975782 25.030844323628198 29.69414280024511 22.719109296368867 28 21.472276434331324 26.33428457385967 31.60707466942626 20.586364322382753 29 23.209937299425405 24.634549361512768 30.7894892750838 21.366024063978024 30 24.0462044292146 24.553984377398734 30.751390643304692 20.64842055008197 31 26.54527574803701 24.897823448086182 27.73844186542318 20.818458938453627 32 27.117490385609184 24.75412111732346 27.57225226051161 20.556136236555744 33 25.843499815561106 26.024565617217295 26.41182242491521 21.720112142306387 34 23.036093372351637 26.959992977051307 28.985490951250615 21.01842269934644 35 23.19311508857175 27.908566743310793 28.190392831057004 20.707925337060455 36 25.333817098025918 28.17871674640279 25.33822806333973 21.149238092231553 37 23.94401706611129 28.736141676746296 26.217523727317584 21.10231752982483 38 24.15578664593225 29.080845642593317 25.526386005304403 21.236981706170035 39 23.94406031086927 27.994926524993957 25.664639496561826 22.396373667574952 40 25.05510463285417 26.148332114551902 26.698664904586927 22.097898348007 41 21.52248359834442 26.235254078088786 27.524207334397445 24.71805498916935 42 24.20819929260225 26.279579955016803 25.853056907074368 23.659163845306583 43 23.415739102645325 25.685656448939397 27.264436073220295 23.63416837519498 44 23.338503964895636 26.7513370198048 27.108711699739533 22.801447315560026 45 22.85891959891352 27.19684451649982 26.669820651015236 23.274415233571425 46 23.421274431666582 27.308372747326505 26.624586634169674 22.645766186837246 47 22.800928378464285 26.96068489317896 28.133871932379034 22.10451479597772 48 23.632135871569986 25.674196588075088 28.497646836494596 22.19602070386033 49 23.7063006315032 25.407722389411262 28.16388379441615 22.722093184669387 50 22.18732850750664 26.953117060532715 28.474770359523944 22.3847840724367 51 22.40303336030365 27.294793893321234 27.082116173582726 23.220056572792387 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1549.0 1 2311.5 2 3074.0 3 22483.0 4 41892.0 5 28807.0 6 15722.0 7 15882.5 8 16043.0 9 16667.5 10 17292.0 11 17294.5 12 17297.0 13 17160.0 14 17023.0 15 16435.5 16 15848.0 17 15258.5 18 14669.0 19 14116.5 20 13564.0 21 13318.0 22 13072.0 23 13072.0 24 13072.0 25 14602.0 26 16854.5 27 17577.0 28 20728.5 29 23880.0 30 27193.0 31 30506.0 32 34779.5 33 39053.0 34 44306.5 35 49560.0 36 54371.5 37 59183.0 38 66467.5 39 73752.0 40 83873.5 41 93995.0 42 107749.5 43 121504.0 44 131794.5 45 142085.0 46 146511.5 47 150938.0 48 150605.0 49 150272.0 50 148627.0 51 146982.0 52 145199.0 53 143416.0 54 138085.0 55 132754.0 56 130182.0 57 127610.0 58 125825.5 59 124041.0 60 118481.0 61 112921.0 62 105296.5 63 97672.0 64 87592.0 65 77512.0 66 66948.5 67 56385.0 68 49024.5 69 41664.0 70 35575.0 71 29486.0 72 24953.0 73 20420.0 74 17512.5 75 12148.0 76 9691.0 77 7232.0 78 4773.0 79 3397.0 80 2021.0 81 1596.0 82 1171.0 83 783.5 84 396.0 85 293.0 86 190.0 87 146.5 88 103.0 89 69.0 90 35.0 91 23.5 92 12.0 93 7.0 94 2.0 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2312419.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.625965477902785 #Duplication Level Percentage of deduplicated Percentage of total 1 76.30949363825162 19.555044496100784 2 5.606260883982992 2.8733169574612987 3 2.359571497832409 1.8139889323829002 4 1.5031133755280228 1.5407492588262015 5 1.1105980250087921 1.4230073324351162 6 0.937736456802483 1.4418241241634782 7 0.7851454959540378 1.4084077962114325 8 0.6722955657169449 1.3782578366407643 9 0.6495267348143919 1.4980274714995674 >10 9.469223949529109 54.89346397994329 >50 0.5555203022029707 8.834119154258566 >100 0.039122512475384605 1.7756405020709272 >500 0.0018790843505962812 0.32499134144115965 >1k 3.416517001084148E-4 0.10563094112304931 >5k 0.0 0.0 >10k+ 1.708258500542074E-4 1.1335298754414584 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25894 1.119779763096567 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.021665623747253417 0.0 2 0.0 0.0 0.0 0.07546210267256928 0.0 3 0.0 0.0 0.0 0.13470742110318243 0.0 4 0.0 0.0 0.0 0.21068846087149432 0.0 5 0.0 0.0 0.0 0.3398605529534224 0.0 6 0.0 0.0 0.0 0.717344045348183 0.0 7 0.0 0.0 0.0 0.9129400856851635 0.0 8 0.0 0.0 0.0 1.4290662721591545 0.0 9 0.0 0.0 0.0 1.7493369497482938 0.0 10 8.648951595709946E-5 0.0 0.0 2.158951297321117 0.0 11 8.648951595709946E-5 0.0 0.0 2.412668292381268 0.0 12 8.648951595709946E-5 0.0 0.0 2.611594179082597 0.0 13 8.648951595709946E-5 0.0 0.0 2.7435339356751522 0.0 14 8.648951595709946E-5 0.0 0.0 2.820769073424842 0.0 15 8.648951595709946E-5 0.0 0.0 2.87837109105227 0.0 16 8.648951595709946E-5 0.0 0.0 2.9614442711290643 0.0 17 8.648951595709946E-5 0.0 0.0 3.043998514110116 0.0 18 8.648951595709946E-5 0.0 0.0 3.172305711032473 0.0 19 8.648951595709946E-5 0.0 0.0 3.238945883077418 0.0 20 1.7297903191419893E-4 0.0 0.0 3.313975538170202 0.0 21 1.7297903191419893E-4 0.0 0.0 3.3948864803480685 0.0 22 2.1622378989274868E-4 0.0 0.0 3.4843166398477092 0.0 23 2.1622378989274868E-4 0.0 0.0 3.582525485216996 0.0 24 2.1622378989274868E-4 0.0 0.0 3.66797712698261 0.0 25 2.1622378989274868E-4 0.0 0.0 3.747677215937077 0.0 26 2.594685478712984E-4 0.0 0.0 3.825777248846338 0.0 27 2.594685478712984E-4 0.0 0.0 3.90742335190984 0.0 28 2.594685478712984E-4 0.0 0.0 3.992010098515883 0.0 29 2.594685478712984E-4 0.0 0.0 4.080834831403824 0.0 30 2.594685478712984E-4 0.0 0.0 4.198893020685265 0.0 31 3.0271330584984813E-4 0.0 0.0 4.298399208793908 0.0 32 3.0271330584984813E-4 0.0 0.0 4.4143384049344 0.0 33 3.0271330584984813E-4 0.0 0.0 4.516828481343563 0.0 34 3.0271330584984813E-4 0.0 0.0 4.626583677093122 0.0 35 3.0271330584984813E-4 0.0 0.0 4.741614733316064 0.0 36 3.0271330584984813E-4 0.0 0.0 4.843499383113527 0.0 37 3.0271330584984813E-4 0.0 0.0 4.956065488131692 0.0 38 3.0271330584984813E-4 0.0 0.0 5.093237860439652 0.0 39 3.0271330584984813E-4 0.0 0.0 5.281568781436237 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 15650 0.0 42.54153 1 AGGGCGA 2935 0.0 38.17717 6 GGGCGAT 6010 0.0 37.287857 7 ATACCGG 110 0.0 36.81818 2 GTTTTTT 18760 0.0 36.77239 2 CGTTAGG 380 0.0 36.710526 2 ACGGGAT 480 0.0 36.562504 5 GTAGGGA 1990 0.0 36.293972 4 TTAACGC 25 0.0021075483 36.000004 28 AATACGG 200 0.0 36.000004 2 TAAGGGA 1670 0.0 35.83832 4 TACGGGA 535 0.0 35.74766 4 ATAGGGC 1140 0.0 35.723686 4 CGGGTAT 240 0.0 35.625004 6 AGGGATC 1315 0.0 35.589355 6 TAACGGG 610 0.0 35.409836 3 TAGAACG 70 2.1827873E-11 35.357143 1 TAGGGAC 1600 0.0 35.29688 5 TAGGGCG 1355 0.0 35.202953 5 AGGGTAC 1045 0.0 35.095695 6 >>END_MODULE