##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547688_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 794237 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.382491624036653 31.0 31.0 33.0 30.0 34.0 2 31.791513112584784 31.0 31.0 34.0 30.0 34.0 3 31.937969397043954 31.0 31.0 34.0 30.0 34.0 4 35.64625294465002 37.0 35.0 37.0 33.0 37.0 5 35.52807537296802 37.0 35.0 37.0 33.0 37.0 6 35.5753257528924 37.0 35.0 37.0 33.0 37.0 7 35.975545082890875 37.0 35.0 37.0 35.0 37.0 8 35.9894414387645 37.0 35.0 37.0 35.0 37.0 9 37.74970821052155 39.0 37.0 39.0 35.0 39.0 10 37.090941368886114 39.0 37.0 39.0 33.0 39.0 11 36.825117691570654 39.0 37.0 39.0 32.0 39.0 12 36.244316243136495 38.0 35.0 39.0 32.0 39.0 13 36.00352035979185 38.0 35.0 39.0 31.0 39.0 14 37.00391193056984 39.0 35.0 41.0 31.0 41.0 15 37.16796623677819 39.0 35.0 41.0 32.0 41.0 16 37.243768547675316 39.0 35.0 41.0 32.0 41.0 17 37.14685289151727 39.0 35.0 41.0 32.0 41.0 18 37.06141869492355 39.0 35.0 41.0 32.0 41.0 19 37.03034736482939 39.0 35.0 41.0 32.0 41.0 20 36.94683199095484 38.0 35.0 41.0 32.0 41.0 21 36.822690204561106 38.0 35.0 41.0 31.0 41.0 22 36.74194478474309 38.0 35.0 41.0 31.0 41.0 23 36.64625798093012 38.0 35.0 40.0 31.0 41.0 24 36.51369175699445 38.0 35.0 40.0 31.0 41.0 25 36.37819945431905 38.0 35.0 40.0 31.0 41.0 26 36.21922801380445 38.0 35.0 40.0 30.0 41.0 27 36.21573535355316 38.0 35.0 40.0 30.0 41.0 28 36.23407874475755 38.0 35.0 40.0 30.0 41.0 29 36.221022188591064 38.0 35.0 40.0 30.0 41.0 30 36.23207304620661 38.0 35.0 40.0 30.0 41.0 31 36.11998685530893 38.0 35.0 40.0 30.0 41.0 32 35.93189564323999 38.0 35.0 40.0 30.0 41.0 33 35.81405550232487 38.0 35.0 40.0 29.0 41.0 34 35.59516366021729 38.0 34.0 40.0 28.0 41.0 35 35.50307653760779 38.0 34.0 40.0 28.0 41.0 36 35.34204651760117 38.0 34.0 40.0 27.0 41.0 37 35.095506756799296 37.0 34.0 40.0 26.0 41.0 38 35.15842500412345 37.0 34.0 40.0 27.0 41.0 39 35.02220873618328 37.0 34.0 40.0 26.0 41.0 40 34.86045349184185 37.0 34.0 40.0 25.0 41.0 41 34.792316399261175 37.0 34.0 40.0 25.0 41.0 42 34.75736209720776 37.0 34.0 40.0 25.0 41.0 43 34.68193876638837 36.0 34.0 40.0 25.0 41.0 44 34.54389936505098 36.0 34.0 40.0 25.0 41.0 45 34.47809658829795 36.0 33.0 40.0 24.0 41.0 46 34.302730796978736 36.0 33.0 40.0 24.0 41.0 47 34.30509029420689 35.0 33.0 40.0 24.0 41.0 48 34.141999176568206 35.0 33.0 40.0 23.0 41.0 49 34.100233305675765 35.0 33.0 40.0 24.0 41.0 50 33.95924138512812 35.0 33.0 39.0 24.0 41.0 51 33.26389478203609 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 1.0 13 5.0 14 9.0 15 28.0 16 60.0 17 209.0 18 410.0 19 799.0 20 1377.0 21 2113.0 22 3209.0 23 4622.0 24 6488.0 25 9040.0 26 11712.0 27 13867.0 28 15479.0 29 17630.0 30 20809.0 31 25486.0 32 30895.0 33 39568.0 34 65744.0 35 95186.0 36 63709.0 37 79254.0 38 111033.0 39 175410.0 40 82.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.933872383180336 24.223625945404205 28.83031135542665 14.012190315988803 2 31.105324984859685 25.725444672056323 29.261668746230658 13.907561596853332 3 28.171440010979094 25.995263378563326 31.851575789090663 13.981720821366922 4 24.783408478829365 28.60191605276511 31.157198669918422 15.457476798487102 5 22.884479066072217 32.58939082414947 29.717074374525488 14.809055735252826 6 21.218981236079408 40.944453607676294 26.788477494752826 11.04808766149147 7 88.54611406922619 3.6325429311402013 6.25631895769147 1.5650240419421406 8 89.4196568530552 2.7384773058923217 5.6748804198243095 2.1669854212281727 9 84.45917276581172 4.214107376009932 8.136740041070864 3.1899798171074885 10 45.38695628634778 23.55543748276648 15.729058203030078 15.328548027855666 11 39.158714590229366 23.951415005848382 20.867448884904633 16.022421519017623 12 35.10853813156526 21.934258917678225 24.324729268467724 18.63247368228879 13 24.679283387704174 29.958941726462 26.068918975066634 19.29285591076719 14 21.22741700525158 31.28033571843165 28.324542926103923 19.167704350212848 15 20.86379758183011 22.87856143695144 37.76958263087718 18.488058350341273 16 23.318984131940464 20.777677192072392 36.159987510025346 19.743351165961798 17 23.484677747322273 21.89308732783791 27.803917470477955 26.81831745436186 18 26.04524845858352 22.821651471789906 29.739108099975198 21.393991969651378 19 28.480541702287855 26.70172756998226 24.097844849837013 20.71988587789287 20 31.194844863686782 25.620186417908002 23.028264863006886 20.156703855398327 21 26.72854576152962 27.792585840246677 25.486976809189198 19.99189158903451 22 26.339367216586485 23.304127105637235 26.229954031353365 24.126551646422918 23 25.394309255297852 27.701806891393876 24.150473976911176 22.753409876397097 24 25.256189273478824 24.354191507069046 30.6518079616034 19.73781125784873 25 23.891357365622603 24.502761770101365 28.494643286575673 23.111237577700358 26 21.728778689484372 28.39429540552757 26.248840081738827 23.628085823249233 27 22.053241035106648 26.863643975286973 27.039158336869225 24.043956652737155 28 20.045276158124086 27.96633750379295 30.427945311034364 21.5604410270486 29 22.84620333729101 24.81501113647438 29.39865556502656 22.940129961208054 30 23.48631453835568 26.2843458564635 29.08439168661243 21.144947918568388 31 27.29512727309355 25.635421165218947 24.94381400010324 22.125637561584263 32 28.802611814861308 24.506035352168183 24.155384350011396 22.535968482959117 33 26.201373141770024 26.085035071395566 24.24578557785648 23.467806208977926 34 21.38543029347663 27.175137899644564 28.18277164121037 23.256660165668432 35 22.740567362134982 26.476857663392668 27.867248692770545 22.91532628170181 36 26.89285439988316 28.110878742743033 23.858621544954467 21.13764531241934 37 23.832432888419955 29.124807834437327 25.693086572395895 21.34967270474682 38 24.568233411437642 29.104033179013317 24.216952874268006 22.11078053528103 39 23.900926297817907 27.98748988022467 24.583342251746014 23.52824157021141 40 25.86016516480597 25.032200715907216 25.70869904071455 23.398935078572265 41 21.36188568399609 25.000220337254497 26.401313461850805 27.236580516898606 42 24.165960538227253 25.98317630631663 24.260642604159717 25.5902205512964 43 22.935975030123252 25.645619632427096 26.33659726252995 25.081808074919703 44 23.388232983353834 26.847905599965756 26.242292917605198 23.52156849907521 45 21.830889268568452 28.890746716660143 24.303702799038575 24.974661215732834 46 23.874108106270548 27.68254312000071 25.17220930276479 23.271139470963956 47 23.016807325773037 26.6911513817664 26.543714281757207 23.748327010703356 48 24.314530801259572 25.011300153480637 27.20006748615338 23.474101559106415 49 23.317599154912198 24.79436238805294 27.706213636483824 24.181824820551046 50 22.16907547747083 27.518234481647163 27.025812194596828 23.286877846285176 51 21.33368251542046 28.98656194561573 25.161507207546364 24.518248331417446 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 491.0 1 597.0 2 703.0 3 3942.5 4 7182.0 5 4894.5 6 2607.0 7 2776.0 8 2945.0 9 3115.5 10 3286.0 11 3422.0 12 3558.0 13 3557.0 14 3556.0 15 3505.0 16 3454.0 17 3418.5 18 3383.0 19 3326.0 20 3269.0 21 3132.0 22 2995.0 23 3098.5 24 3202.0 25 3295.5 26 4170.5 27 4952.0 28 5473.5 29 5995.0 30 6934.5 31 7874.0 32 9233.0 33 10592.0 34 13474.5 35 16357.0 36 17671.5 37 18986.0 38 21563.0 39 24140.0 40 30017.5 41 35895.0 42 41654.5 43 47414.0 44 49751.0 45 52088.0 46 52781.0 47 53474.0 48 56497.0 49 59520.0 50 62160.0 51 64800.0 52 62826.0 53 60852.0 54 57267.0 55 53682.0 56 50667.0 57 47652.0 58 45529.5 59 43407.0 60 41506.5 61 39606.0 62 35721.5 63 31837.0 64 28017.5 65 24198.0 66 19732.5 67 15267.0 68 12929.0 69 10591.0 70 8881.0 71 7171.0 72 6209.0 73 5247.0 74 4501.0 75 3108.5 76 2462.0 77 1914.0 78 1366.0 79 943.0 80 520.0 81 366.0 82 212.0 83 196.5 84 181.0 85 126.0 86 71.0 87 49.5 88 28.0 89 24.0 90 20.0 91 11.0 92 2.0 93 1.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 794237.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.189857943033026 #Duplication Level Percentage of deduplicated Percentage of total 1 73.3191559556379 21.40175746848154 2 6.5560301895733195 3.827391798077622 3 3.079325812619375 2.696552490920229 4 2.106029084114974 2.4589875915684813 5 1.6127688345214335 2.353824658731579 6 1.3157595548964904 2.304410069677015 7 1.1041995147740749 2.2561998883914867 8 0.9472674017075019 2.2120480711926387 9 0.8739807835859589 2.2960237426033347 >10 8.866126271996478 52.956174463221195 >50 0.20024433869941838 3.590871684889943 >100 0.017809149381752723 0.915310286867193 >500 8.6873899423184E-4 0.1740851951611935 >1k 4.3436949711592E-4 0.5563625902165455 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4388 0.5524799272761154 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 854 0.10752458019457668 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02870679658590572 0.0 2 0.0 0.0 0.0 0.10903546422541383 0.0 3 0.0 0.0 0.0 0.1752625475771086 0.0 4 0.0 0.0 0.0 0.319929693529765 0.0 5 0.0 0.0 0.0 0.535734295934337 0.0 6 0.0 0.0 0.0 1.1113811116832886 0.0 7 0.0 0.0 0.0 1.4015967526065898 0.0 8 0.0 0.0 0.0 2.181968354533974 0.0 9 0.0 0.0 0.0 2.596076485985921 0.0 10 5.036280102790477E-4 0.0 0.0 3.1768854888402327 0.0 11 5.036280102790477E-4 0.0 0.0 3.5500738444570072 0.0 12 5.036280102790477E-4 0.0 0.0 3.845829393493378 0.0 13 5.036280102790477E-4 0.0 0.0 4.021595569080765 0.0 14 5.036280102790477E-4 0.0 0.0 4.125846567208528 0.0 15 5.036280102790477E-4 0.0 0.0 4.203783001799211 0.0 16 5.036280102790477E-4 0.0 0.0 4.3264164223021595 0.0 17 5.036280102790477E-4 0.0 0.0 4.450183005828235 0.0 18 5.036280102790477E-4 0.0 0.0 4.6389176026803085 0.0 19 5.036280102790477E-4 0.0 0.0 4.7373768786898625 0.0 20 5.036280102790477E-4 0.0 0.0 4.843894202863881 0.0 21 5.036280102790477E-4 0.0 0.0 4.9603581802409105 0.0 22 5.036280102790477E-4 0.0 0.0 5.085257926790114 0.0 23 5.036280102790477E-4 0.0 0.0 5.23017688674791 0.0 24 5.036280102790477E-4 0.0 0.0 5.351677144227731 0.0 25 5.036280102790477E-4 0.0 0.0 5.460586701450574 0.0 26 5.036280102790477E-4 0.0 0.0 5.572895747742802 0.0 27 5.036280102790477E-4 0.0 0.0 5.681931211968216 0.0 28 5.036280102790477E-4 0.0 0.0 5.786937652111398 0.0 29 5.036280102790477E-4 0.0 0.0 5.917125492768531 0.0 30 5.036280102790477E-4 0.0 0.0 6.093773017373907 0.0 31 5.036280102790477E-4 0.0 0.0 6.2288712311312615 0.0 32 5.036280102790477E-4 0.0 0.0 6.392046706461674 0.0 33 5.036280102790477E-4 0.0 0.0 6.521730919108528 0.0 34 5.036280102790477E-4 0.0 0.0 6.656073690850464 0.0 35 5.036280102790477E-4 0.0 0.0 6.800614929800551 0.0 36 5.036280102790477E-4 0.0 0.0 6.941630772678684 0.0 37 5.036280102790477E-4 0.0 0.0 7.080758010518271 0.0 38 5.036280102790477E-4 0.0 0.0 7.256524186105659 0.0 39 5.036280102790477E-4 0.0 0.0 7.533645498761705 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGAAA 20 7.0319674E-4 45.000004 42 CGTTCGA 20 7.0319674E-4 45.000004 14 TCTAACG 20 7.0319674E-4 45.000004 1 TATAGCG 40 6.8102963E-9 45.000004 1 TATACGA 20 7.0319674E-4 45.000004 38 GCGTTAG 35 1.2113014E-7 45.0 1 ATATACG 25 3.889713E-5 45.0 1 CGAATAT 110 0.0 45.0 14 TCGTAAG 25 3.889713E-5 45.0 1 TACGTAG 50 2.1827873E-11 45.0 1 CACGACG 30 2.164652E-6 44.999996 26 AGTTGCG 30 2.164652E-6 44.999996 1 CGGTCTA 30 2.164652E-6 44.999996 31 ATAGCGG 145 0.0 41.89655 2 CGTTTTT 2865 0.0 41.780106 1 TACGGGA 190 0.0 41.44737 4 TACGGGT 125 0.0 41.399998 4 ACGTAGG 120 0.0 41.249996 2 AATGCGG 95 0.0 40.263157 2 CGTAAGG 85 0.0 39.705883 2 >>END_MODULE