##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547686_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1796730 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.416723158181806 31.0 31.0 33.0 30.0 34.0 2 31.82047942651372 31.0 31.0 34.0 30.0 34.0 3 31.94872574065107 31.0 31.0 34.0 30.0 34.0 4 35.6305727627412 37.0 35.0 37.0 33.0 37.0 5 35.4949430354032 37.0 35.0 37.0 33.0 37.0 6 35.54901237247667 37.0 35.0 37.0 33.0 37.0 7 35.97253176604164 37.0 35.0 37.0 35.0 37.0 8 35.996955023848884 37.0 35.0 37.0 35.0 37.0 9 37.745531604637314 39.0 37.0 39.0 35.0 39.0 10 37.16043312016831 39.0 37.0 39.0 33.0 39.0 11 36.83930251067216 39.0 35.0 39.0 32.0 39.0 12 35.83471974086257 37.0 35.0 39.0 32.0 39.0 13 35.33446984243598 37.0 35.0 39.0 30.0 39.0 14 36.26453112042433 38.0 35.0 41.0 31.0 41.0 15 36.61248490312958 38.0 35.0 41.0 31.0 41.0 16 36.80666822505329 38.0 35.0 41.0 32.0 41.0 17 36.767598915808165 38.0 35.0 41.0 32.0 41.0 18 36.678629510277005 38.0 35.0 40.0 32.0 41.0 19 36.604636200208155 37.0 35.0 40.0 32.0 41.0 20 36.46963817601977 37.0 35.0 40.0 31.0 41.0 21 36.312502713262425 37.0 35.0 40.0 31.0 41.0 22 36.19697561681499 37.0 35.0 40.0 31.0 41.0 23 36.14560785426859 37.0 35.0 40.0 31.0 41.0 24 36.02379155465763 36.0 35.0 40.0 31.0 41.0 25 35.86411202573564 36.0 35.0 40.0 31.0 41.0 26 35.685354505128764 36.0 34.0 40.0 30.0 41.0 27 35.605594607982276 36.0 34.0 40.0 30.0 41.0 28 35.692726786996374 36.0 34.0 40.0 30.0 41.0 29 35.71565844617722 36.0 35.0 40.0 30.0 41.0 30 35.736966043868584 36.0 35.0 40.0 30.0 41.0 31 35.5088098935288 36.0 34.0 40.0 30.0 41.0 32 35.2721260289526 35.0 34.0 40.0 29.0 41.0 33 35.12653876765012 36.0 34.0 40.0 29.0 41.0 34 34.95571176526245 36.0 34.0 40.0 27.0 41.0 35 34.81368764366377 35.0 34.0 40.0 27.0 41.0 36 34.591788415621714 35.0 34.0 40.0 25.0 41.0 37 34.31230680180105 35.0 33.0 40.0 24.0 41.0 38 34.41424921941527 35.0 33.0 40.0 25.0 41.0 39 34.34108575022402 35.0 33.0 40.0 24.0 41.0 40 34.14886098634742 35.0 33.0 40.0 23.0 41.0 41 34.11956944003829 35.0 33.0 40.0 23.0 41.0 42 34.0555247588675 35.0 33.0 40.0 23.0 41.0 43 33.941030650125505 35.0 33.0 40.0 23.0 41.0 44 33.77202028128879 35.0 33.0 39.0 23.0 41.0 45 33.68420575155978 35.0 33.0 39.0 23.0 41.0 46 33.54104178145854 35.0 33.0 39.0 23.0 41.0 47 33.56256421387743 35.0 33.0 39.0 23.0 41.0 48 33.433262092801925 35.0 33.0 39.0 23.0 41.0 49 33.458847461777786 35.0 33.0 39.0 23.0 41.0 50 33.28587378181474 35.0 33.0 39.0 23.0 41.0 51 32.571253889009476 35.0 32.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 0.0 12 5.0 13 5.0 14 21.0 15 66.0 16 196.0 17 477.0 18 1130.0 19 2153.0 20 3508.0 21 5603.0 22 8418.0 23 12229.0 24 17572.0 25 23919.0 26 29902.0 27 35190.0 28 39071.0 29 43932.0 30 51423.0 31 60947.0 32 75504.0 33 98836.0 34 177365.0 35 305396.0 36 125510.0 37 147084.0 38 205742.0 39 325307.0 40 217.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.92434589504266 25.089022835929715 30.29420113205657 13.692430136971053 2 29.234999137321687 27.23096959476382 29.665614755695067 13.86841651221942 3 27.583888508568343 25.705587372615806 32.653598481686174 14.056925637129675 4 24.23530524898009 30.23492678365698 30.58144518096765 14.948322786395284 5 22.82151464048577 33.049094744341105 29.54094382572785 14.58844678944527 6 21.158827425378327 41.90223350197303 25.622825911517033 11.31611316113161 7 86.63594418749618 5.306250800064562 6.34563902200108 1.7121659904381847 8 88.0569701624618 3.6448436882558872 5.527708670751866 2.770477478530441 9 83.03451269806816 5.47461221218547 8.45797643496797 3.032898654778403 10 54.695697183216176 19.214461827876196 13.267658468439889 12.82218252046774 11 48.46114886488231 19.657321912585644 18.101217211267134 13.78031201126491 12 41.859322213131634 20.858225776827904 22.09541778675705 15.18703422328341 13 22.03742354165623 39.74019468701474 23.896077874805897 14.326303896523129 14 16.36177945489862 42.090019090236154 26.89135262393348 14.656848830931748 15 13.98407106243008 23.19970168027472 48.227836124515086 14.588391132780107 16 16.33985072882403 17.496952797582274 47.20904086868923 18.954155604904464 17 17.947493502084342 18.5449678026192 27.114090597919553 36.393448097376904 18 22.692892087291913 22.53237826495912 33.15534331813906 21.619386329609902 19 28.61815631730978 24.879753774913315 24.98822861531783 21.513861292459076 20 30.885274916097575 24.239702125528044 23.138145408603407 21.736877549770973 21 23.514328808446454 28.893378526545447 27.064723135919145 20.527569529088957 22 23.822555420124335 24.6055333856506 25.194102619759228 26.37780857446583 23 21.182314538077506 30.941376834582822 22.554473961029203 25.321834666310465 24 22.00458610920951 24.833558742827247 34.8617210154002 18.300134132563045 25 18.24085978416345 25.22632782888915 33.387876865193995 23.144935521753407 26 17.221841901676935 33.433125733972275 26.772915240464624 22.57211712388617 27 19.324439398240138 31.80600312790458 27.973707791376555 20.895849682478726 28 16.442537276051496 28.42040818598231 36.766904320626914 18.370150217339276 29 17.097727538361358 24.816973056608393 35.79998107673384 22.285318328296405 30 20.477756813767233 28.80666544222003 30.655802485626666 20.05977525838607 31 29.114112860585617 25.85953370845926 24.227847255848122 20.798506175107 32 29.8566284305377 26.567764772670348 24.802836263656754 18.772770533135198 33 27.857774957840075 26.93815987933635 24.57770505306863 20.626360109754945 34 20.697767611160277 26.843487891892494 28.334641264964688 24.124103231982545 35 21.388856422500876 25.282262777378904 29.9618751843627 23.367005615757517 36 31.18292676139431 22.06697723085828 26.66388383340847 20.08621217433894 37 21.535344765212358 28.169897536079436 28.956994094827827 21.337763603880383 38 22.452399637118543 29.910726709077046 23.729887072626383 23.90698658117803 39 20.877037729653313 28.884863056775362 25.98047564186049 24.25762357171083 40 24.22651149588419 24.65345377435675 24.661746617466175 26.458288112292887 41 18.376884673824115 22.100371229956643 26.670451319897815 32.85229277632143 42 23.595754509581297 24.96145775937397 24.03349418109566 27.409293549949076 43 24.008838278428033 25.13399342138218 25.46047541923383 25.396692880955957 44 22.565605294061992 28.558269745593385 27.01919598381504 21.856928976529584 45 19.279635782783167 33.65063198143294 22.983308566117337 24.08642366966656 46 23.69365458360466 29.570386201599575 26.28235739370968 20.453601821086085 47 23.52963439136654 26.177054983219517 26.5947025986097 23.698608026804248 48 25.073939879670288 23.01575640190791 28.463263818158545 23.447039900263256 49 22.412271181535345 20.74886042978077 31.092762963828736 25.746105424855152 50 20.999204109688154 28.974358974358978 26.741747507972818 23.284689407980053 51 20.28173403905985 31.701758194052527 23.135306918680048 24.881200848207577 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1701.0 1 2006.0 2 2311.0 3 7095.0 4 11879.0 5 8767.5 6 5656.0 7 6512.0 8 7368.0 9 8562.0 10 9756.0 11 10418.0 12 11080.0 13 11420.5 14 11761.0 15 11393.5 16 11026.0 17 10472.5 18 9919.0 19 9300.5 20 8682.0 21 8939.0 22 9196.0 23 8497.0 24 7798.0 25 7707.0 26 7836.5 27 8057.0 28 8751.5 29 9446.0 30 11372.0 31 13298.0 32 16805.0 33 20312.0 34 23814.0 35 27316.0 36 30032.0 37 32748.0 38 42835.5 39 52923.0 40 78017.0 41 103111.0 42 131913.5 43 160716.0 44 164533.0 45 168350.0 46 156798.0 47 145246.0 48 147246.5 49 149247.0 50 154999.5 51 160752.0 52 151956.0 53 143160.0 54 125288.5 55 107417.0 56 96048.0 57 84679.0 58 78230.0 59 71781.0 60 64660.0 61 57539.0 62 52503.0 63 47467.0 64 41024.0 65 34581.0 66 31633.0 67 28685.0 68 23838.0 69 18991.0 70 16179.0 71 13367.0 72 11282.0 73 9197.0 74 7398.5 75 4287.0 76 2974.0 77 2525.0 78 2076.0 79 1456.0 80 836.0 81 762.0 82 688.0 83 479.5 84 271.0 85 173.5 86 76.0 87 51.5 88 27.0 89 22.5 90 18.0 91 15.0 92 12.0 93 13.0 94 14.0 95 7.5 96 1.0 97 0.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1796730.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.535748317113466 #Duplication Level Percentage of deduplicated Percentage of total 1 82.37013178152264 17.739024268943407 2 7.126187784294356 3.0693557316610347 3 2.269413944977154 1.4662058263912674 4 1.1298915657173079 0.9733224153966886 5 0.6768098240292016 0.728780301442137 6 0.4990472684921166 0.6448413823553503 7 0.35220005435082463 0.530942420944113 8 0.29139499832484733 0.502032747583169 9 0.2243558708528145 0.43485044113377236 >10 2.6026200617373276 13.47614865618049 >50 1.2265021401211709 19.33559952768539 >100 1.226498098940868 39.53712689599226 >500 0.0028638248965328966 0.4521870430553353 >1k 0.0015620863071997618 0.4151262079084566 >5k 5.206954357332539E-4 0.6944561333271398 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7335 0.4082416389774758 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5051 0.2811218157430443 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1131333032787341E-4 0.0 0.0 0.05799424510082205 0.0 2 1.1131333032787341E-4 0.0 0.0 0.2428856867754198 0.0 3 1.1131333032787341E-4 0.0 0.0 0.352640630478703 0.0 4 1.1131333032787341E-4 0.0 0.0 0.5938009606340408 0.0 5 1.1131333032787341E-4 0.0 0.0 0.9399297612885631 0.0 6 1.1131333032787341E-4 0.0 0.0 1.655841445292281 0.0 7 1.1131333032787341E-4 0.0 0.0 1.9920077028824588 0.0 8 1.1131333032787341E-4 0.0 0.0 2.9407868739320877 0.0 9 1.1131333032787341E-4 0.0 0.0 3.5020843421103893 0.0 10 1.1131333032787341E-4 0.0 0.0 4.385188648266573 0.0 11 1.1131333032787341E-4 0.0 0.0 5.114179648583816 0.0 12 1.1131333032787341E-4 0.0 0.0 5.706589192588758 0.0 13 1.1131333032787341E-4 0.0 0.0 6.005131544528115 0.0 14 1.1131333032787341E-4 0.0 0.0 6.132696621083858 0.0 15 1.1131333032787341E-4 0.0 0.0 6.263879380875257 0.0 16 1.1131333032787341E-4 0.0 0.0 6.498806164532233 0.0 17 1.1131333032787341E-4 0.0 0.0 6.735235678148637 0.0 18 1.6696999549181013E-4 0.0 0.0 7.105241188158488 0.0 19 1.6696999549181013E-4 0.0 0.0 7.255402870770789 0.0 20 3.3393999098362025E-4 0.0 0.0 7.41502618646096 0.0 21 3.3393999098362025E-4 0.0 0.0 7.608878351226951 0.0 22 3.8959665614755694E-4 0.0 0.0 7.793435852910565 0.0 23 3.8959665614755694E-4 0.0 0.0 7.99552520412082 0.0 24 3.8959665614755694E-4 0.0 0.0 8.153033566534761 0.0 25 3.8959665614755694E-4 0.0 0.0 8.283437133013864 0.0 26 3.8959665614755694E-4 0.0 0.0 8.410946552904443 0.0 27 8.905066426229873E-4 0.0 0.0 8.545301742610187 0.0 28 9.461633077869241E-4 0.0 0.0 8.671698029197486 0.0 29 0.0010018199729508607 0.0 0.0 8.80165634235528 0.0 30 0.0010018199729508607 0.0 0.0 9.00341175357455 0.0 31 0.0010018199729508607 0.0 0.0 9.151180199584802 0.0 32 0.0010018199729508607 0.0 0.0 9.277186889515955 0.0 33 0.0010018199729508607 0.0 0.0 9.40647732269178 0.0 34 0.0010018199729508607 0.0 0.0 9.538494932460637 0.0 35 0.0010018199729508607 0.0 0.0 9.708804327862284 0.0 36 0.0010018199729508607 0.0 0.0 9.840265370979502 0.0 37 0.0010018199729508607 0.0 0.0 9.985473610392212 0.0 38 0.0010018199729508607 0.0 0.0 10.129457403171317 0.0 39 0.0010018199729508607 0.0 0.0 10.32586977453485 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCACG 50 2.1827873E-11 45.000004 1 CGTACGT 25 3.8916856E-5 45.000004 32 CGTAATC 25 3.8916856E-5 45.000004 35 TTAGTCG 25 3.8916856E-5 45.000004 1 CGACTCA 25 3.8916856E-5 45.000004 31 CGTATAA 20 7.0343504E-4 45.0 26 TAAGTCG 20 7.0343504E-4 45.0 19 CACGTTA 35 1.2124474E-7 45.0 29 TATTGCG 110 0.0 42.954544 1 TACGTAG 85 0.0 42.35294 1 CGTTTTT 5600 0.0 41.745537 1 TAAGTAG 295 0.0 41.186436 1 CAATACG 55 6.184564E-11 40.909092 1 ACGGGTA 125 0.0 39.600002 5 TATAGCG 125 0.0 39.600002 1 TATACGG 250 0.0 39.600002 2 AATCGTG 40 3.4596815E-7 39.375 29 ATAGCGG 490 0.0 39.030613 2 GACCGAT 1200 0.0 39.0 9 GCGATAA 260 0.0 38.94231 9 >>END_MODULE