##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547684_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5810637 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.314423014206533 31.0 31.0 33.0 30.0 34.0 2 31.707936840659638 31.0 31.0 34.0 30.0 34.0 3 31.71581497863315 31.0 31.0 34.0 30.0 34.0 4 35.482773575427274 37.0 35.0 37.0 33.0 37.0 5 35.384628569982944 37.0 35.0 37.0 33.0 37.0 6 35.45156340001965 37.0 35.0 37.0 33.0 37.0 7 35.967877704286124 37.0 35.0 37.0 35.0 37.0 8 35.99482931045254 37.0 35.0 37.0 35.0 37.0 9 37.70730437988124 39.0 37.0 39.0 35.0 39.0 10 37.08025867043493 39.0 37.0 39.0 33.0 39.0 11 36.79209990229987 39.0 37.0 39.0 32.0 39.0 12 36.404928753938684 38.0 35.0 39.0 32.0 39.0 13 36.2262998015536 39.0 35.0 39.0 32.0 39.0 14 37.34985458565042 39.0 35.0 41.0 32.0 41.0 15 37.51001809268072 39.0 35.0 41.0 32.0 41.0 16 37.56672581680804 39.0 35.0 41.0 32.0 41.0 17 37.48895637431834 39.0 35.0 41.0 32.0 41.0 18 37.254069734523085 39.0 36.0 40.0 32.0 41.0 19 37.07890804398898 38.0 35.0 40.0 32.0 41.0 20 36.8308221628713 38.0 35.0 40.0 32.0 41.0 21 36.70927215036837 38.0 35.0 40.0 31.0 41.0 22 36.62138522850421 38.0 35.0 40.0 31.0 41.0 23 36.51718735828791 38.0 35.0 40.0 31.0 41.0 24 36.37176061763969 38.0 35.0 40.0 31.0 41.0 25 36.24416255911357 38.0 35.0 40.0 31.0 41.0 26 36.063913646644934 37.0 35.0 40.0 31.0 41.0 27 35.96012485378109 37.0 35.0 40.0 30.0 41.0 28 35.97689668103514 37.0 35.0 40.0 30.0 41.0 29 35.85153899649901 37.0 35.0 40.0 30.0 41.0 30 35.78498725699093 37.0 35.0 40.0 30.0 41.0 31 35.5611052626416 37.0 35.0 40.0 29.0 41.0 32 35.1657468879918 37.0 34.0 40.0 26.0 41.0 33 34.80460145763709 37.0 34.0 40.0 24.0 41.0 34 34.343465096855994 37.0 34.0 40.0 22.0 41.0 35 34.06667289662045 37.0 33.0 40.0 20.0 41.0 36 33.82773437748735 37.0 33.0 40.0 18.0 41.0 37 33.512116829875964 36.0 33.0 40.0 18.0 41.0 38 33.579020854340065 36.0 33.0 40.0 18.0 41.0 39 33.44618447168529 36.0 33.0 40.0 17.0 41.0 40 33.319257940222386 36.0 33.0 40.0 16.0 41.0 41 33.26365078389856 36.0 33.0 40.0 15.0 41.0 42 33.20009699452917 36.0 33.0 40.0 15.0 41.0 43 33.10208519306919 35.0 33.0 40.0 15.0 41.0 44 32.950351054454096 35.0 33.0 40.0 15.0 41.0 45 32.91131213324804 35.0 32.0 40.0 15.0 41.0 46 32.71332299711718 35.0 32.0 40.0 14.0 41.0 47 32.74499422352489 35.0 32.0 40.0 14.0 41.0 48 32.55248951190721 35.0 32.0 40.0 12.0 41.0 49 32.53710410751868 35.0 32.0 40.0 12.0 41.0 50 32.377264661344356 35.0 31.0 39.0 12.0 41.0 51 31.77568552294697 35.0 31.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 4.0 12 8.0 13 24.0 14 57.0 15 240.0 16 655.0 17 1853.0 18 4166.0 19 8288.0 20 13913.0 21 21974.0 22 32948.0 23 48963.0 24 74540.0 25 113971.0 26 156375.0 27 163810.0 28 152098.0 29 147808.0 30 160177.0 31 185210.0 32 221867.0 33 278051.0 34 420967.0 35 662636.0 36 515781.0 37 554072.0 38 708679.0 39 1160843.0 40 657.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.763249192816552 24.07150885522534 26.712837163980474 20.452404787977635 2 37.007870221457644 24.589386671375273 26.5230645108273 11.879678596339783 3 25.218543164888807 23.717313609506153 38.73048686400475 12.333656361600285 4 21.172033289981805 26.864249134819467 38.43012392617195 13.533593649026777 5 19.918160435766335 30.5918266792436 36.601357131756814 12.888655753233252 6 18.363046943046005 38.07804548795597 33.51481085464468 10.044096714353348 7 79.12512862187054 3.5971959700803886 15.345374353964978 1.9323010540840873 8 78.75726878137456 3.3439707212823655 14.783559874760718 3.115200622582343 9 73.05379771615401 6.000065053108635 17.60944626208796 3.3366909686493926 10 36.8106801371347 28.74789803596404 22.797380046284083 11.644041780617167 11 29.251577753007112 24.533798962144772 32.1187849111896 14.095838373658518 12 26.49048632705846 22.937089341495607 34.18769749340735 16.38472683803858 13 19.581760140927752 30.977206113546586 35.31870946335144 14.122324282174226 14 15.8835253346578 34.67981221335974 34.37285791557793 15.063804536404529 15 14.369061429925841 26.660829096706607 44.770788469491386 14.199321003876166 16 16.375571215341793 25.048079926520966 42.53881287025846 16.037535987878783 17 16.414757968876735 25.951302757339683 34.2177114144284 23.41622785935518 18 18.50805686192409 27.40286478057397 36.971213311036294 17.117865046465646 19 21.645974443077414 30.026656285704995 31.440907425468158 16.88646184574944 20 22.987152699437257 28.327978498742905 30.510286565827467 18.17458223599237 21 19.442790867851496 31.01983483050137 32.64884727784578 16.888527023801352 22 19.355072430096733 28.237231133178685 31.464863490870275 20.9428329458543 23 17.04721874727332 32.53223355718142 30.315023981019635 20.10552371452562 24 17.42006943472807 29.548120111443893 37.132951172134824 15.898859281693213 25 16.995692554878232 30.59335835296543 34.322226633672 18.088722458484327 26 16.06964950658594 34.71302716036125 32.126856315409135 17.090467017643675 27 17.01980350863425 32.78592347104113 32.19736493606467 17.996908084259953 28 15.693649422602032 31.731064941761115 36.14608863021386 16.429197005422985 29 15.735366019250558 29.44391466890807 35.1436167841839 19.677102527657468 30 17.52733822470755 32.51832802496525 32.79368509855288 17.160648651774324 31 20.920322505088514 31.58037578324029 28.881859252264423 18.617442459406774 32 20.546387599156514 33.324108871368146 28.40845160349889 17.721051925976447 33 19.302358760321802 33.09301544735973 27.46521594792447 20.139409844393995 34 15.73996104041605 35.10869806528957 28.652125403806846 20.499215490487533 35 16.116856034889118 33.38269108877391 28.64892437782639 21.851528498510575 36 20.177925415062067 33.35014732463928 27.1217596280752 19.350167632223457 37 16.9251839342227 35.24217740671117 29.088549155626136 18.744089503439984 38 16.71016447938496 35.840975782861676 27.235568148552385 20.213291589200978 39 16.970256445205578 35.31141250090136 27.969222651492426 19.74910840240063 40 19.134236057079455 32.571385891082166 27.938554757421603 20.355823294416776 41 16.28776672850154 31.762662165955298 28.375098977960594 23.574472127582567 42 19.038790411447142 33.130068183574366 26.325392551625583 21.50574885335291 43 18.922985552186447 31.941024710371686 28.55136192469087 20.584627812750995 44 18.852322043177022 34.64277668696221 27.482253666852706 19.022647603008068 45 16.700027897113518 35.95753787407474 26.199829726069616 21.142604502742127 46 19.884893859313532 34.07774397196039 26.632209170870595 19.405152997855485 47 18.932881197018503 32.72809848558772 27.788657250487336 20.550363066906435 48 19.527790154504576 30.89816142360984 28.334931264850997 21.23911715703459 49 18.66155122063209 29.892419712331026 28.991761144260085 22.454267922776797 50 17.574854529718515 33.074962349222645 28.94754912413217 20.40263399692667 51 16.949604664686504 33.798101653915054 27.37921849187963 21.873075189518808 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6100.0 1 6619.5 2 7139.0 3 99787.0 4 192435.0 5 121706.0 6 50977.0 7 55730.5 8 60484.0 9 71358.5 10 82233.0 11 92827.5 12 103422.0 13 108825.0 14 114228.0 15 113783.0 16 113338.0 17 107349.0 18 101360.0 19 94626.5 20 87893.0 21 81754.0 22 75615.0 23 71766.5 24 67918.0 25 67257.5 26 67404.0 27 68211.0 28 71734.5 29 75258.0 30 83632.5 31 92007.0 32 102463.0 33 112919.0 34 128227.0 35 143535.0 36 152319.5 37 161104.0 38 191662.0 39 222220.0 40 269050.0 41 315880.0 42 384554.5 43 453229.0 44 504189.0 45 555149.0 46 555809.5 47 556470.0 48 513631.5 49 470793.0 50 421277.0 51 371761.0 52 331264.0 53 290767.0 54 260876.5 55 230986.0 56 201049.0 57 171112.0 58 149353.5 59 127595.0 60 109275.5 61 90956.0 62 74906.0 63 58856.0 64 52101.5 65 45347.0 66 36898.0 67 28449.0 68 22315.0 69 16181.0 70 12943.5 71 9706.0 72 7578.0 73 5450.0 74 4263.5 75 2274.5 76 1472.0 77 1233.0 78 994.0 79 768.5 80 543.0 81 450.5 82 358.0 83 301.5 84 245.0 85 194.0 86 143.0 87 100.5 88 58.0 89 44.0 90 30.0 91 24.0 92 18.0 93 14.5 94 11.0 95 7.0 96 3.0 97 4.0 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5810637.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.290258099233828 #Duplication Level Percentage of deduplicated Percentage of total 1 77.81944520556435 20.458932995934713 2 8.063450992460778 4.2398041552463415 3 3.116821429614564 2.4582611950136957 4 1.8024924894897683 1.8955197108246609 5 1.3036553738766394 1.7136718125835015 6 0.9595826310885945 1.5136605023316616 7 0.7629962481377581 1.4041557804602103 8 0.62218120576477 1.3085843587238652 9 0.4978204402235111 1.1779045074495282 >10 3.8011775982996814 20.716067726758702 >50 0.6797399778087585 12.681892134395337 >100 0.5629570323742744 24.955248199464585 >500 0.00514184274275997 0.8737216469908796 >1k 0.0021368695188860084 1.2397970218881151 >5k 3.338858623259381E-4 0.5658790343602317 >10k+ 6.677717246518761E-5 2.7968992175740994 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 159314 2.741764801346221 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTT 7335 0.1262340084228287 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7303 0.12568329427565345 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCT 6273 0.10795718266344981 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7209817099226815E-5 0.0 0.0 0.10666644638100779 0.0 2 1.7209817099226815E-5 0.0 0.0 0.33061779629324634 0.0 3 1.7209817099226815E-5 0.0 0.0 0.5268441308586305 0.0 4 1.7209817099226815E-5 0.0 0.0 0.8232832303928124 0.0 5 1.7209817099226815E-5 0.0 0.0 1.4223053341656 0.0 6 1.7209817099226815E-5 0.0 0.0 2.666695579159393 0.0 7 1.7209817099226815E-5 0.0 0.0 3.4643017624401593 0.0 8 1.7209817099226815E-5 0.0 0.0 5.137422971009891 0.0 9 1.7209817099226815E-5 0.0 0.0 6.0606952387492115 0.0 10 3.441963419845363E-5 0.0 0.0 7.234921059429457 0.0 11 3.441963419845363E-5 0.0 0.0 8.009035842369778 0.0 12 3.441963419845363E-5 0.0 0.0 8.69990674000114 0.0 13 5.162945129768044E-5 0.0 0.0 9.143902811344091 0.0 14 5.162945129768044E-5 0.0 0.0 9.381071300788536 0.0 15 5.162945129768044E-5 0.0 0.0 9.582271272495598 0.0 16 5.162945129768044E-5 0.0 0.0 9.873306489460623 0.0 17 5.162945129768044E-5 0.0 0.0 10.184236254992353 0.0 18 5.162945129768044E-5 0.0 0.0 10.672100150121235 0.0 19 5.162945129768044E-5 0.0 0.0 10.892248130454544 0.0 20 1.0325890259536089E-4 0.0 0.0 11.130776195449828 0.0 21 1.0325890259536089E-4 0.0 0.0 11.3806799495477 0.0 22 1.0325890259536089E-4 0.0 0.0 11.655417469719756 0.0 23 1.0325890259536089E-4 0.0 0.0 11.959824714570882 0.0 24 1.0325890259536089E-4 0.0 0.0 12.215218400323407 0.0 25 1.0325890259536089E-4 0.0 0.0 12.43330120260481 0.0 26 1.0325890259536089E-4 0.0 0.0 12.64630710884194 0.0 27 1.0325890259536089E-4 0.0 0.0 12.862341942888534 0.0 28 1.0325890259536089E-4 0.0 0.0 13.088943604634053 0.0 29 1.0325890259536089E-4 0.0 0.0 13.328814035363076 0.0 30 1.0325890259536089E-4 0.0 0.0 13.662443549648687 0.0 31 1.0325890259536089E-4 0.0 0.0 13.905721524163358 0.0 32 1.0325890259536089E-4 0.0 0.0 14.138828496772385 0.0 33 1.0325890259536089E-4 0.0 0.0 14.372296875540496 0.0 34 1.204687196945877E-4 0.0 0.0 14.610618422730589 0.0 35 1.3767853679381452E-4 0.0 0.0 14.87435886977624 0.0 36 1.3767853679381452E-4 0.0 0.0 15.131714474678077 0.0 37 1.3767853679381452E-4 0.0 0.0 15.381084724445873 1.7209817099226815E-5 38 1.3767853679381452E-4 0.0 0.0 15.643276287952595 1.7209817099226815E-5 39 1.3767853679381452E-4 0.0 0.0 15.899874660902066 1.7209817099226815E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 70805 0.0 44.183323 1 CGTTCGG 1540 0.0 41.2013 45 GCGTAAG 490 0.0 40.408165 1 GTTTTTT 78610 0.0 40.013992 2 ATCGCCG 45 1.9306754E-8 40.0 10 ACGGGTA 670 0.0 38.955223 5 TGATTCG 995 0.0 38.89447 15 CGCATCG 100 0.0 38.250004 21 AGGGCGA 6500 0.0 38.25 6 TACGGGA 1655 0.0 38.20242 4 CGTAAGG 975 0.0 38.076927 2 TAGACGG 645 0.0 37.67442 2 ATTATAC 2930 0.0 37.551197 42 ACGCGAG 150 0.0 37.5 1 TGGGCGA 4155 0.0 37.41877 6 GCCCTAC 3105 0.0 37.391304 26 TTCGGCA 1060 0.0 37.35849 18 TAGTACG 265 0.0 37.35849 1 GTTAGCG 320 0.0 37.26563 1 GGCGATA 3495 0.0 36.888412 8 >>END_MODULE