##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547683_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2445775 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.429142909711647 31.0 31.0 33.0 30.0 34.0 2 31.846295346055953 31.0 31.0 34.0 30.0 34.0 3 32.00542159438215 33.0 31.0 34.0 30.0 34.0 4 35.690077787204466 37.0 35.0 37.0 33.0 37.0 5 35.56465373961219 37.0 35.0 37.0 33.0 37.0 6 35.617858551992725 37.0 35.0 37.0 33.0 37.0 7 36.01543069170304 37.0 35.0 37.0 35.0 37.0 8 36.02872995267349 37.0 35.0 37.0 35.0 37.0 9 37.782187241262996 39.0 38.0 39.0 35.0 39.0 10 37.09820527235743 39.0 37.0 39.0 33.0 39.0 11 36.90611810162423 39.0 37.0 39.0 33.0 39.0 12 36.26952561049156 38.0 35.0 39.0 32.0 39.0 13 36.00220666250984 38.0 35.0 39.0 31.0 39.0 14 37.018963314286886 39.0 35.0 41.0 31.0 41.0 15 37.22904314583312 39.0 35.0 41.0 32.0 41.0 16 37.309575492430824 39.0 35.0 41.0 32.0 41.0 17 37.26093610409788 39.0 35.0 41.0 32.0 41.0 18 37.19531150657767 39.0 35.0 41.0 32.0 41.0 19 37.15595547423618 39.0 35.0 41.0 32.0 41.0 20 37.06498594515031 39.0 35.0 41.0 32.0 41.0 21 36.959537978759286 38.0 35.0 41.0 32.0 41.0 22 36.85458883176089 38.0 35.0 41.0 31.0 41.0 23 36.77044985740716 38.0 35.0 41.0 31.0 41.0 24 36.68061902668888 38.0 35.0 41.0 31.0 41.0 25 36.55006449898294 38.0 35.0 40.0 31.0 41.0 26 36.38785170344778 38.0 35.0 40.0 31.0 41.0 27 36.341111099753654 38.0 35.0 40.0 31.0 41.0 28 36.38914658952684 38.0 35.0 40.0 31.0 41.0 29 36.42353487135979 38.0 35.0 40.0 31.0 41.0 30 36.458550357248726 38.0 35.0 40.0 31.0 41.0 31 36.33367092230479 38.0 35.0 40.0 31.0 41.0 32 36.14200774805532 38.0 35.0 40.0 30.0 41.0 33 36.06212550214145 38.0 35.0 40.0 30.0 41.0 34 35.89024297001973 38.0 35.0 40.0 30.0 41.0 35 35.82368083736239 38.0 35.0 40.0 30.0 41.0 36 35.66844374482526 38.0 35.0 40.0 29.0 41.0 37 35.400159867526654 38.0 34.0 40.0 27.0 41.0 38 35.48688820517014 38.0 34.0 40.0 29.0 41.0 39 35.39785098792816 37.0 34.0 40.0 28.0 41.0 40 35.23774590876103 37.0 34.0 40.0 27.0 41.0 41 35.21595567867036 37.0 34.0 40.0 27.0 41.0 42 35.18506853655794 37.0 34.0 40.0 27.0 41.0 43 35.09775674377242 37.0 34.0 40.0 27.0 41.0 44 34.94906236264579 37.0 34.0 40.0 27.0 41.0 45 34.87377743251117 37.0 34.0 40.0 27.0 41.0 46 34.694551215872266 36.0 34.0 40.0 26.0 41.0 47 34.73557420449551 36.0 34.0 40.0 26.0 41.0 48 34.59281209432593 36.0 34.0 40.0 26.0 41.0 49 34.58381985260296 36.0 34.0 40.0 26.0 41.0 50 34.42357494045854 36.0 34.0 40.0 26.0 41.0 51 33.70288027312406 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 8.0 13 6.0 14 15.0 15 68.0 16 160.0 17 406.0 18 1012.0 19 1930.0 20 3389.0 21 5436.0 22 8248.0 23 12038.0 24 17373.0 25 23967.0 26 31303.0 27 38122.0 28 43034.0 29 50817.0 30 60164.0 31 73184.0 32 91773.0 33 119406.0 34 201836.0 35 320512.0 36 183214.0 37 229639.0 38 336911.0 39 591445.0 40 356.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.25591070315135 24.221483987693063 30.250411423781827 13.272193885373756 2 29.055657204771496 26.64819944598338 30.440944077030796 13.855199272214328 3 28.222710592756894 26.198566916417086 31.353211149840032 14.225511340985985 4 25.11473868201286 29.11747809998876 30.27522973290675 15.492553485091637 5 22.97758379245842 33.54936574296491 29.089061749343255 14.383988715233412 6 21.49686704623279 41.31778270691294 26.089194631558506 11.096155615295764 7 89.49425028876328 3.862661119685989 5.138984575441322 1.5041040161094132 8 90.09091187864787 2.9580807719434534 4.671934253968579 2.2790730954400957 9 84.79079228465415 4.345166664963049 7.731250830513845 3.1327902198689577 10 44.437489139434334 21.00696098373726 19.43976858051129 15.115781296317119 11 40.47571833059051 23.00403757500179 20.14895074158498 16.371293352822725 12 35.544193558279076 23.027302184379185 23.038382516789156 18.390121740552587 13 22.945896494976033 33.67313019390581 25.139311670125014 18.241661640993144 14 18.967280309922213 35.95878606985516 27.241181220676474 17.832752399546155 15 18.943647719025666 23.880651327288895 39.99153642505954 17.184164528625896 16 19.882123253365496 20.89730249103045 39.117294109229185 20.10328014637487 17 20.610195132422238 21.142337295949137 27.261256656887902 30.986210914740724 18 24.493422330345187 23.380319121750777 30.35904774560211 21.76721080230193 19 28.053725301795957 25.225010477251587 25.177867955964878 21.543396264987578 20 29.67828193517392 24.746675389191566 23.864705461459046 21.710337214175464 21 25.008105815130172 28.06059429015343 25.715407181772648 21.21589271294375 22 24.602999049381076 24.33952428166941 25.59282844906011 25.4646482198894 23 22.731158835134057 28.841819055309664 24.13059255246292 24.296429557093354 24 22.79649599820098 25.2985658942462 32.47649518046427 19.42844292708855 25 20.75031431754761 25.928264047183408 30.69505575942186 22.626365875847124 26 19.98536251290491 31.106459097831973 26.369596549151087 22.53858184011203 27 20.946489354090218 29.493269004712207 27.682472835808692 21.877768805388882 28 18.729686909057456 28.278275802148606 33.009782175384075 19.98225511340986 29 19.187006163690445 25.66646563972565 32.14494383170979 23.00158436487412 30 21.508683341681063 28.38143328801709 28.87289305026014 21.236990320041706 31 27.018102646400425 27.059112142367965 24.440760086271222 21.48202512496039 32 27.50968506914986 27.616195275526163 24.586766975702997 20.28735267962098 33 26.401406507139864 26.8198423812493 24.133781725628893 22.64496938598195 34 20.51975345238217 28.058795269393137 27.77405934724167 23.647391930983023 35 21.508438020668294 26.66786601384019 27.993744314174446 23.829951651317067 36 27.459067166848953 25.498379859144855 25.07798141693328 21.96457155707291 37 21.876828408173278 29.294886079054695 26.96535862865554 21.862926884116487 38 22.532980343653854 29.649661150351115 24.166164099314123 23.651194406680908 39 21.842974108411443 29.024746757162863 24.99845652196134 24.13382261246435 40 23.228547188518977 26.23385225542006 25.319622614508692 25.217977941552267 41 19.723318784434383 24.712085126391433 26.573580971266775 28.99101511790741 42 23.29192178348376 26.190961965021316 24.439083726017316 26.078032525477607 43 22.590549007983153 26.44850814159111 26.603346587482495 24.35759626294324 44 22.585274606208667 28.500086884525356 26.61479490141162 22.29984360785436 45 20.697365865625414 30.778260469585305 24.205946990217825 24.318426674571455 46 23.036379061851562 28.81671453833652 26.179636311598575 21.967270088213347 47 22.909916079770216 26.907667303819853 26.885015996974378 23.297400619435557 48 24.112725005366396 24.263679201888973 28.33175578293179 23.29184000981284 49 22.266643497459906 23.977062485306295 29.108973638212838 24.647320379020965 50 21.615643303247438 28.73048420234895 26.862323803293435 22.79154869111018 51 20.659300221811083 29.755435393689115 24.822847563655692 24.76241682084411 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1279.0 1 1680.0 2 2081.0 3 7991.5 4 13902.0 5 10088.0 6 6274.0 7 6726.5 8 7179.0 9 8146.5 10 9114.0 11 9615.0 12 10116.0 13 10219.5 14 10323.0 15 9907.0 16 9491.0 17 9372.0 18 9253.0 19 9259.0 20 9265.0 21 9413.5 22 9562.0 23 9764.5 24 9967.0 25 10535.0 26 12400.0 27 13697.0 28 17515.0 29 21333.0 30 23395.0 31 25457.0 32 31786.0 33 38115.0 34 42251.5 35 46388.0 36 51768.0 37 57148.0 38 71428.0 39 85708.0 40 113323.0 41 140938.0 42 160694.5 43 180451.0 44 189633.5 45 198816.0 46 196704.5 47 194593.0 48 202290.0 49 209987.0 50 213502.0 51 217017.0 52 206594.5 53 196172.0 54 176888.5 55 157605.0 56 140502.5 57 123400.0 58 114171.0 59 104942.0 60 98143.5 61 91345.0 62 81295.0 63 71245.0 64 60930.5 65 50616.0 66 42647.5 67 34679.0 68 29522.0 69 24365.0 70 20742.5 71 17120.0 72 14308.0 73 11496.0 74 8980.5 75 5255.0 76 4045.0 77 3054.5 78 2064.0 79 1517.5 80 971.0 81 632.5 82 294.0 83 222.5 84 151.0 85 132.0 86 113.0 87 75.5 88 38.0 89 37.5 90 37.0 91 41.5 92 46.0 93 27.5 94 9.0 95 4.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2445775.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.900126421142495 #Duplication Level Percentage of deduplicated Percentage of total 1 79.87967048691047 15.896155411687236 2 6.960740643124834 2.7703923756593785 3 2.351330819435794 1.4037534169410262 4 1.156459178541618 0.9205473541547519 5 0.8040757862795872 0.800060489957167 6 0.5857899283852012 0.6994376178658507 7 0.42875939747443104 0.5972656349795843 8 0.3642492743334363 0.5798885286435838 9 0.30306816793254554 0.542798537047353 >10 4.2935627740311215 21.008478163703035 >50 1.8736394823429623 27.07536478195506 >100 0.9953210491628213 26.62849407074288 >500 0.0016665060226032367 0.24147304886925455 >1k 0.001458192769777832 0.4904493804587383 >5k 2.0831325282540458E-4 0.3454411873351928 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8333 0.3407099998977829 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4869 0.199078001860351 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.056587380278234914 0.0 2 0.0 0.0 0.0 0.19981396489865175 0.0 3 0.0 0.0 0.0 0.2971655201316556 0.0 4 0.0 0.0 0.0 0.4793163721110895 0.0 5 0.0 0.0 0.0 0.7579192689433819 0.0 6 0.0 0.0 0.0 1.342273921354172 0.0 7 0.0 0.0 0.0 1.6212039128701536 0.0 8 0.0 0.0 0.0 2.4459322709570586 0.0 9 0.0 0.0 0.0 2.8623238032934344 0.0 10 0.0 0.0 0.0 3.475503674704337 0.0 11 0.0 0.0 0.0 3.9351534789586124 0.0 12 0.0 0.0 0.0 4.324927681409778 0.0 13 0.0 0.0 0.0 4.540237756948207 0.0 14 0.0 0.0 0.0 4.654639122568511 0.0 15 0.0 0.0 0.0 4.756733550715008 0.0 16 0.0 0.0 0.0 4.938884402694442 0.0 17 0.0 0.0 0.0 5.129785037462563 0.0 18 0.0 0.0 0.0 5.422248571516186 0.0 19 0.0 0.0 0.0 5.54940662980037 0.0 20 2.0443417730576198E-4 0.0 0.0 5.677177990616471 0.0 21 2.0443417730576198E-4 0.0 0.0 5.833529249419918 0.0 22 2.0443417730576198E-4 0.0 0.0 6.0001839907595755 0.0 23 2.0443417730576198E-4 0.0 0.0 6.1841338634993 0.0 24 2.0443417730576198E-4 0.0 0.0 6.333043718248817 0.0 25 2.0443417730576198E-4 0.0 0.0 6.460201776533001 0.0 26 4.0886835461152396E-4 0.0 0.0 6.58719628747534 0.0 27 4.0886835461152396E-4 0.0 0.0 6.721509541965226 0.0 28 4.0886835461152396E-4 0.0 0.0 6.851488791896229 0.0 29 4.0886835461152396E-4 0.0 0.0 6.993447884617351 0.0 30 4.0886835461152396E-4 0.0 0.0 7.1927303206550075 0.0 31 4.0886835461152396E-4 0.0 0.0 7.340168249327923 0.0 32 4.0886835461152396E-4 0.0 0.0 7.49688748965052 0.0 33 4.0886835461152396E-4 0.0 0.0 7.63418548312907 0.0 34 4.0886835461152396E-4 0.0 0.0 7.775572160153734 0.0 35 4.0886835461152396E-4 0.0 0.0 7.945620508836667 0.0 36 4.0886835461152396E-4 0.0 0.0 8.094816571434412 0.0 37 4.4975519007267633E-4 0.0 0.0 8.25043186719956 0.0 38 4.4975519007267633E-4 0.0 0.0 8.408868354611524 0.0 39 4.4975519007267633E-4 0.0 0.0 8.622052314705973 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAAGCG 35 1.2126839E-7 45.000004 1 CGTTTTT 5955 0.0 40.730476 1 GGCGATA 1145 0.0 40.480347 8 AGGGCGA 3285 0.0 39.726025 6 TACGGAC 40 3.4603545E-7 39.375004 4 TATGGGT 1190 0.0 38.94958 4 TAGGGTA 1570 0.0 38.837578 5 GCGATAA 250 0.0 38.699997 9 TTCGTAC 35 6.251179E-6 38.57143 33 GGGCGAT 6160 0.0 38.388798 7 TAGGGCG 1370 0.0 38.10219 5 TCACGGG 590 0.0 37.75424 3 ACACGAC 700 0.0 37.607143 26 ATAGGGT 1360 0.0 37.555145 4 AACGTAT 30 1.1402982E-4 37.500004 16 CGCGTAG 30 1.1402982E-4 37.500004 1 TAGGGTC 1160 0.0 37.435345 5 TAGGGAC 1605 0.0 37.42991 5 GACACGA 705 0.0 37.340427 25 ATAGGGC 1500 0.0 36.899998 4 >>END_MODULE