##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547681_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 8164393 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.375227037698945 31.0 31.0 33.0 30.0 34.0 2 31.782475316903536 31.0 31.0 34.0 30.0 34.0 3 31.911166451688448 31.0 31.0 34.0 30.0 34.0 4 35.623561114708714 37.0 35.0 37.0 33.0 37.0 5 35.51231928693291 37.0 35.0 37.0 33.0 37.0 6 35.55605701489382 37.0 35.0 37.0 33.0 37.0 7 35.97784624037574 37.0 35.0 37.0 35.0 37.0 8 35.98648141999044 37.0 35.0 37.0 35.0 37.0 9 37.72105103220778 39.0 37.0 39.0 35.0 39.0 10 37.06928377896556 39.0 37.0 39.0 33.0 39.0 11 36.85168891306433 39.0 37.0 39.0 32.0 39.0 12 36.42491254401889 39.0 35.0 39.0 32.0 39.0 13 36.27786180797519 39.0 35.0 39.0 32.0 39.0 14 37.300159485218316 39.0 35.0 41.0 32.0 41.0 15 37.40243542906374 39.0 35.0 41.0 32.0 41.0 16 37.4402322377181 39.0 35.0 41.0 32.0 41.0 17 37.339198639751906 39.0 35.0 41.0 32.0 41.0 18 37.22471088787617 39.0 35.0 41.0 32.0 41.0 19 37.1716503602901 39.0 35.0 41.0 32.0 41.0 20 37.07758947909539 39.0 35.0 41.0 32.0 41.0 21 36.97735177618226 39.0 35.0 41.0 31.0 41.0 22 36.88614426081645 39.0 35.0 41.0 31.0 41.0 23 36.768697072764624 38.0 35.0 41.0 31.0 41.0 24 36.65720782916746 38.0 35.0 41.0 31.0 41.0 25 36.533218207403785 38.0 35.0 40.0 31.0 41.0 26 36.365968786656886 38.0 35.0 40.0 30.0 41.0 27 36.34879408671288 38.0 35.0 40.0 30.0 41.0 28 36.35018279987257 38.0 35.0 40.0 30.0 41.0 29 36.324405868262346 38.0 35.0 40.0 30.0 41.0 30 36.3289428865073 38.0 35.0 40.0 30.0 41.0 31 36.20331774817797 38.0 35.0 40.0 30.0 41.0 32 35.99098242820991 38.0 35.0 40.0 30.0 41.0 33 35.851008887004824 38.0 35.0 40.0 29.0 41.0 34 35.60294770229704 38.0 35.0 40.0 27.0 41.0 35 35.46072537174533 38.0 34.0 40.0 27.0 41.0 36 35.341931972162534 38.0 34.0 40.0 26.0 41.0 37 35.10298120141938 38.0 34.0 40.0 25.0 41.0 38 35.15987912389813 38.0 34.0 40.0 26.0 41.0 39 35.04696405476806 38.0 34.0 40.0 25.0 41.0 40 34.90171896428797 38.0 34.0 40.0 24.0 41.0 41 34.824592593717625 37.0 34.0 40.0 24.0 41.0 42 34.787810679863156 37.0 34.0 40.0 24.0 41.0 43 34.70010814031123 37.0 34.0 40.0 24.0 41.0 44 34.53700170974131 37.0 33.0 40.0 23.0 41.0 45 34.45356562331088 37.0 33.0 40.0 23.0 41.0 46 34.24393705692511 36.0 33.0 40.0 23.0 41.0 47 34.2577166483779 36.0 33.0 40.0 23.0 41.0 48 34.081202729951876 36.0 33.0 40.0 23.0 41.0 49 34.05000984151547 36.0 33.0 40.0 23.0 41.0 50 33.9032809910057 35.0 33.0 40.0 23.0 41.0 51 33.22020130584111 35.0 32.0 39.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 4.0 11 8.0 12 15.0 13 43.0 14 102.0 15 270.0 16 754.0 17 1950.0 18 4238.0 19 8154.0 20 13737.0 21 21786.0 22 32920.0 23 47631.0 24 68638.0 25 98123.0 26 132150.0 27 156096.0 28 169228.0 29 185420.0 30 214228.0 31 253348.0 32 309310.0 33 391615.0 34 616408.0 35 827277.0 36 661304.0 37 837499.0 38 1192087.0 39 1919078.0 40 968.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.91952102256714 23.711462689265446 27.189847426501885 15.179168861665527 2 32.647497493077566 24.698333360483748 28.189199123560073 14.464970022878616 3 28.912645434878016 25.513041814621122 31.657674979634127 13.916637770866739 4 25.212456088284824 28.15076393309337 30.898096159751255 15.738683818870552 5 23.092016761074582 31.67811740566629 30.135528752719274 15.094337080539852 6 21.372329822927437 40.115376611586434 27.37758949134369 11.134704074142437 7 86.87819167940593 3.6572467787868614 7.675034751511839 1.7895267902953715 8 87.2849457393832 2.8933198095682067 7.365238297568479 2.456496153480118 9 81.69312770710572 4.624875358155836 10.051953647993182 3.630043286745261 10 40.57890157908861 25.514119665724078 17.657038312584906 16.24994044260241 11 34.41938671987005 25.82690470681654 23.14828548797198 16.605423085341435 12 29.89889144238892 23.04689399444637 27.359376257365366 19.69483830579934 13 24.702338557195862 27.3128694319345 28.777754819004915 19.207037191864725 14 21.76989765191362 28.81527138637251 29.957462851188083 19.457368110525792 15 21.824929299704216 23.318414485926876 36.05601788154979 18.80063833281911 16 24.576915883397575 22.402326786571887 33.6485517049461 19.372205625084437 17 23.80158573944199 23.214095646792114 28.918524622712305 24.065793991053592 18 26.44675482917101 22.685715888492876 30.28836313979496 20.579166142541155 19 27.491706976868947 25.994596291481802 26.41746912477143 20.096227606877818 20 30.06933889635151 24.92111783447955 25.431872277583896 19.577670991585045 21 27.189271756026447 26.696412090892736 26.69898423557024 19.415331917510585 22 26.39196814754018 23.31268227778844 27.392287460929428 22.903062113741953 23 24.324221041294802 27.017819940808828 26.890413041116467 21.767545976779903 24 24.012256636837545 24.978746123563624 30.855998725196105 20.15299851440272 25 24.181075065837717 25.219694838305802 28.73309748808025 21.86613260777623 26 22.18451512561926 27.452598129462903 27.65449923833897 22.708387506578873 27 22.744164814212155 25.673898843429022 28.55272890464729 23.029207437711534 28 21.019664291025677 27.117876368763728 29.943156827457962 21.91930251275263 29 22.33567149450057 25.731992568216643 29.199317083339814 22.73301885394297 30 24.028363161841916 25.329133470179592 29.043224646339294 21.599278721639195 31 25.816983577346164 25.79721480825335 26.829404219027676 21.55639739537281 32 26.420371973764617 24.938106237659063 26.423862741541228 22.217659047035095 33 24.828851330405087 26.19775897608065 25.569261548286565 23.4041281452277 34 21.890139291432934 26.73592513246239 29.08044725431517 22.293488321789507 35 21.832449760808917 27.3151353689123 28.579503705909303 22.27291116436948 36 24.461585815381497 28.115929745175176 26.167383172270124 21.2551012671732 37 23.22378405841071 28.05443099076686 26.387264797272742 22.33452015354969 38 23.296024578924605 28.376206289922596 26.733695940408552 21.594073190744247 39 23.228744623145896 26.95742353411944 26.306854655330774 23.506977187403887 40 25.14365734231559 25.312843220555404 26.767966706159296 22.77553273096971 41 21.222863720548485 25.8426070376573 26.501076075098297 26.43345316669592 42 23.612141159789836 26.50798412080359 25.646548371691562 24.23332634771501 43 22.912579049048716 25.535554204703274 26.840978870076444 24.710887876171565 44 23.091098137975475 26.595816737386357 26.817364132275358 23.495720992362813 45 22.198747659501446 26.864275151869833 26.286375484374652 24.65060170425407 46 23.57678029462815 26.686552202962304 26.21085241731994 23.525815085089608 47 22.736154420787926 26.627307137223795 27.92791821755763 22.708620224430646 48 23.326032933495487 25.670432572268385 28.08446384195371 22.919070652282418 49 23.634678046487963 24.859190389291648 27.883481356176752 23.622650208043634 50 22.011740493138927 27.09642958147654 27.867289093016467 23.024540832368064 51 21.88775087137525 26.837990282927343 26.78695158354087 24.487307262156538 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4165.0 1 5935.0 2 7705.0 3 51066.0 4 94427.0 5 65198.0 6 35969.0 7 36663.5 8 37358.0 9 39447.5 10 41537.0 11 42353.0 12 43169.0 13 43481.0 14 43793.0 15 42749.0 16 41705.0 17 40272.5 18 38840.0 19 38074.5 20 37309.0 21 37343.5 22 37378.0 23 36707.0 24 36036.0 25 39452.0 26 50539.0 27 58210.0 28 65866.5 29 73523.0 30 86169.0 31 98815.0 32 108970.0 33 119125.0 34 142928.5 35 166732.0 36 185196.0 37 203660.0 38 231925.5 39 260191.0 40 307275.0 41 354359.0 42 408063.5 43 461768.0 44 488145.5 45 514523.0 46 557627.0 47 600731.0 48 623085.5 49 645440.0 50 651370.0 51 657300.0 52 635941.0 53 614582.0 54 575091.0 55 535600.0 56 509555.5 57 483511.0 58 456600.5 59 429690.0 60 397646.0 61 365602.0 62 331252.5 63 296903.0 64 259811.5 65 222720.0 66 188529.0 67 154338.0 68 127974.5 69 101611.0 70 85719.5 71 69828.0 72 60408.0 73 50988.0 74 44988.0 75 30936.0 76 22884.0 77 17055.0 78 11226.0 79 8206.0 80 5186.0 81 3728.0 82 2270.0 83 1617.0 84 964.0 85 745.0 86 526.0 87 348.0 88 170.0 89 136.0 90 102.0 91 74.5 92 47.0 93 31.5 94 16.0 95 8.5 96 1.0 97 2.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 8164393.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.09086761310167 #Duplication Level Percentage of deduplicated Percentage of total 1 80.55213840272862 15.378102101987345 2 7.35052320821155 2.8065573090999605 3 2.4495707340779624 1.4029329177963195 4 1.2422747582636864 0.9486441179643965 5 0.7577659633151828 0.7233204843682304 6 0.5442415121707475 0.6234025595043599 7 0.42232201238283296 0.5643745539949542 8 0.3392341548912907 0.5181019472697646 9 0.2767335427558759 0.47547750859713345 >10 3.3310764555924584 15.419012830152942 >50 1.4040158161112826 19.38445162187699 >100 1.3214789071041055 39.287336021586675 >500 0.005684354002657057 0.7349245491530418 >1k 0.0028095037967153487 0.9488433994955436 >5k 6.533729759732528E-5 0.07639992404098721 >10k+ 6.533729759732528E-5 0.7081181531113214 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 56770 0.6953364444852177 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.573815591679626E-5 0.0 0.0 0.049740378739729946 0.0 2 8.573815591679626E-5 0.0 0.0 0.16652799540639457 0.0 3 8.573815591679626E-5 0.0 0.0 0.2640735202237325 0.0 4 8.573815591679626E-5 0.0 0.0 0.4297196374549829 0.0 5 8.573815591679626E-5 0.0 0.0 0.7269738240185155 0.0 6 8.573815591679626E-5 0.0 0.0 1.4114460193182763 0.0 7 8.573815591679626E-5 0.0 0.0 1.7820063291906698 0.0 8 8.573815591679626E-5 0.0 0.0 2.6581400478884345 0.0 9 8.573815591679626E-5 0.0 0.0 3.1324557747281396 0.0 10 1.224830798811375E-4 0.0 0.0 3.7888425998111557 0.0 11 1.224830798811375E-4 0.0 0.0 4.1982912875458105 0.0 12 1.224830798811375E-4 0.0 0.0 4.546486187031908 0.0 13 1.224830798811375E-4 0.0 0.0 4.755381079769188 0.0 14 1.224830798811375E-4 0.0 0.0 4.876541342387609 0.0 15 1.224830798811375E-4 0.0 0.0 4.982097260629174 0.0 16 1.224830798811375E-4 0.0 0.0 5.132286013179424 0.0 17 1.224830798811375E-4 0.0 0.0 5.28581855381043 0.0 18 1.224830798811375E-4 0.0 0.0 5.517850500337257 0.0 19 1.224830798811375E-4 0.0 0.0 5.638484085712189 0.0 20 2.2046954378604754E-4 0.0 0.0 5.7616285742246856 0.0 21 2.3271785177416128E-4 0.0 0.0 5.90192069392054 0.0 22 3.184560076909576E-4 0.0 0.0 6.050406931660443 0.0 23 3.184560076909576E-4 0.0 0.0 6.221283076402618 0.0 24 3.184560076909576E-4 0.0 0.0 6.371018641557309 0.0 25 3.184560076909576E-4 0.0 0.0 6.500005572980134 0.0 26 3.184560076909576E-4 0.0 0.0 6.62912723579083 0.0 27 3.184560076909576E-4 0.0 0.0 6.766883955733145 0.0 28 3.184560076909576E-4 0.0 0.0 6.9067841295733805 0.0 29 3.184560076909576E-4 0.0 0.0 7.06094133391178 0.0 30 3.184560076909576E-4 0.0 0.0 7.264581702522159 0.0 31 3.307043156790713E-4 0.0 0.0 7.4196697782676555 0.0 32 3.307043156790713E-4 0.0 0.0 7.6092858342316445 0.0 33 3.307043156790713E-4 0.0 0.0 7.773021215416749 0.0 34 3.307043156790713E-4 0.0 0.0 7.932065494642407 0.0 35 3.307043156790713E-4 0.0 0.0 8.100969661798494 0.0 36 3.307043156790713E-4 0.0 0.0 8.258286929597828 0.0 37 3.307043156790713E-4 0.0 0.0 8.423087913577898 0.0 38 3.307043156790713E-4 0.0 0.0 8.621816710685044 0.0 39 3.307043156790713E-4 0.0 0.0 8.923296563504476 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 38425 0.0 41.69161 1 GGGCGAT 22195 0.0 38.187656 7 AGGGCGA 11245 0.0 38.176968 6 CACGACC 7225 0.0 36.99654 27 TAACGGG 2365 0.0 36.723045 3 GCGAGAC 7315 0.0 36.695145 21 ACACGAC 7280 0.0 36.65522 26 CGAGACA 7395 0.0 36.511158 22 AACACGT 6730 0.0 36.274147 41 GACACGA 7345 0.0 36.269573 25 ACGACCA 7385 0.0 36.225456 28 GACCGAT 5885 0.0 36.20646 9 CGACCAA 7415 0.0 36.169926 29 TAGGGCG 4555 0.0 36.15807 5 ACGTAGG 730 0.0 36.061646 2 TGGGCGA 7200 0.0 35.90625 6 GCGATAT 1205 0.0 35.850624 9 GGCGATA 4285 0.0 35.548424 8 GGCGATT 5820 0.0 35.52835 8 GTCAAGC 7555 0.0 35.440105 16 >>END_MODULE