SRR1547679_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547679_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2211921
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9133	0.4128990140244611	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	8089	0.36570022166252775	No Hit
GAGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCT	2433	0.10999488679749411	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACCATA	30	2.1664164E-6	45.000004	29
GTTACCC	45	3.8562575E-10	45.000004	26
ACTAGTC	60	0.0	45.000004	10
CCGTAGA	45	3.8562575E-10	45.000004	33
CCATCCG	30	2.1664164E-6	45.000004	45
CTAGTCG	60	0.0	45.000004	1
TACGACA	30	2.1664164E-6	45.000004	37
GTACTCC	30	2.1664164E-6	45.000004	42
ATCGGAC	45	3.8562575E-10	45.000004	38
ACGCGAT	20	7.0347043E-4	45.0	13
CGGCGTA	20	7.0347043E-4	45.0	24
GGTACGA	20	7.0347043E-4	45.0	21
CGAACTT	20	7.0347043E-4	45.0	34
CGAGTTA	25	3.89198E-5	45.0	25
TCCGATT	20	7.0347043E-4	45.0	24
ACGTTAG	40	6.8193913E-9	45.0	1
GCGAACT	20	7.0347043E-4	45.0	33
TTCGTTA	35	1.2126111E-7	45.0	15
ATTCGTC	25	3.89198E-5	45.0	14
CGTTCCC	20	7.0347043E-4	45.0	18