##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547679_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2211921 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.511402984102958 31.0 31.0 33.0 30.0 34.0 2 31.90731133706855 31.0 31.0 34.0 30.0 34.0 3 32.02738253310132 33.0 31.0 34.0 30.0 34.0 4 35.68987047909939 37.0 35.0 37.0 33.0 37.0 5 35.576354218798954 37.0 35.0 37.0 33.0 37.0 6 35.624980729420265 37.0 35.0 37.0 33.0 37.0 7 36.02376531530737 37.0 35.0 37.0 35.0 37.0 8 36.055135784686705 37.0 35.0 37.0 35.0 37.0 9 37.82567822268517 39.0 38.0 39.0 35.0 39.0 10 37.28923727384477 39.0 37.0 39.0 34.0 39.0 11 36.948314157693694 39.0 37.0 39.0 33.0 39.0 12 35.76089516759414 37.0 35.0 39.0 32.0 39.0 13 35.19495045257041 37.0 35.0 39.0 30.0 39.0 14 36.11982706434814 38.0 35.0 41.0 31.0 41.0 15 36.525139912320554 38.0 35.0 41.0 32.0 41.0 16 36.73681022061819 38.0 35.0 41.0 32.0 41.0 17 36.69584582812858 38.0 35.0 40.0 32.0 41.0 18 36.634254568766245 37.0 35.0 40.0 32.0 41.0 19 36.56013438092952 37.0 35.0 40.0 32.0 41.0 20 36.417787977057046 36.0 35.0 40.0 32.0 41.0 21 36.237149970545964 36.0 35.0 40.0 31.0 41.0 22 36.123043273245294 36.0 35.0 40.0 31.0 41.0 23 36.09492020736726 36.0 35.0 40.0 31.0 41.0 24 35.97514649031317 35.0 35.0 40.0 31.0 41.0 25 35.85296671987833 35.0 35.0 40.0 31.0 41.0 26 35.68186341193921 35.0 34.0 40.0 31.0 41.0 27 35.61189979208118 35.0 34.0 40.0 30.0 41.0 28 35.71994117330592 36.0 35.0 40.0 31.0 41.0 29 35.746889242427734 36.0 35.0 40.0 31.0 41.0 30 35.782869731785176 36.0 35.0 40.0 31.0 41.0 31 35.54801866793615 35.0 35.0 40.0 30.0 41.0 32 35.281711688618174 35.0 34.0 40.0 30.0 41.0 33 35.15062789313 35.0 34.0 40.0 29.0 41.0 34 34.996679809089024 35.0 34.0 40.0 29.0 41.0 35 34.86914270446368 35.0 34.0 40.0 29.0 41.0 36 34.63450231721657 35.0 34.0 40.0 26.0 41.0 37 34.33840494303368 35.0 34.0 40.0 25.0 41.0 38 34.42148973674919 35.0 33.0 40.0 26.0 41.0 39 34.348705491742244 35.0 34.0 40.0 25.0 41.0 40 34.15283366811021 35.0 33.0 40.0 24.0 41.0 41 34.154793050927225 35.0 34.0 40.0 24.0 41.0 42 34.118567073598015 35.0 34.0 40.0 24.0 41.0 43 34.01977331016795 35.0 33.0 40.0 24.0 41.0 44 33.87677769685264 35.0 33.0 40.0 23.0 41.0 45 33.81689581137844 35.0 33.0 39.0 23.0 41.0 46 33.70411511080188 35.0 33.0 39.0 23.0 41.0 47 33.71550927903845 35.0 33.0 39.0 23.0 41.0 48 33.606895544641965 35.0 33.0 39.0 23.0 41.0 49 33.63281735649691 35.0 33.0 39.0 24.0 41.0 50 33.458903821610264 35.0 33.0 39.0 24.0 41.0 51 32.72771902793997 35.0 32.0 38.0 21.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 5.0 13 4.0 14 29.0 15 79.0 16 202.0 17 507.0 18 1201.0 19 2338.0 20 4056.0 21 6408.0 22 9723.0 23 14111.0 24 20645.0 25 28358.0 26 35400.0 27 40785.0 28 45150.0 29 50908.0 30 59577.0 31 72251.0 32 90782.0 33 121101.0 34 232198.0 35 431548.0 36 143123.0 37 160208.0 38 229473.0 39 411415.0 40 333.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.12831742182474 25.882027432263634 28.523577469538917 13.46607767637271 2 28.67466785658258 26.93929846499943 30.771759027560208 13.614274650857784 3 28.449433772725158 25.87190048830858 31.85592975517661 13.822735983789656 4 23.46991596896996 29.866889459433676 31.577212748556573 15.085981823039793 5 22.7726939614932 33.10538667520223 30.197235796395983 13.924683566908582 6 20.499285462726743 40.53847311906709 27.569791145343796 11.392450272862368 7 86.68451540538744 5.407019509286272 6.2464708278460215 1.6619942574802629 8 87.56962839088737 3.9925024447075645 5.462808120181507 2.9750610442235503 9 82.83632191203935 5.350959640963669 8.556951175019362 3.2557672719776156 10 57.251818668026566 19.56774224757575 11.857475922512602 11.322963161885076 11 51.97608775358613 19.70545060153595 17.592626499771015 10.7258351451069 12 45.008976360367306 21.11770718755326 20.38255434981629 13.490762102263146 13 20.508869891827057 45.30505384233886 22.452067682344897 11.734008583489192 14 14.44215231918319 47.0655145459535 25.804176550609174 12.68815658425414 15 12.113452514805005 23.519375239893286 52.42642029258731 11.940751952714406 16 13.915325185664408 17.73707107984417 50.889973014406934 17.457630720084488 17 14.127222446009599 19.13513186049592 27.637108196902147 39.10053749659233 18 20.89156891227128 23.151369330098138 34.78930757472803 21.167754182902556 19 27.972472796270754 25.7154301622888 24.973360260153957 21.338736781286492 20 30.925471569735087 24.65684805198739 22.69651583397418 21.721164544303345 21 20.81516473689612 30.566281526329377 26.877632609844564 21.74092112692994 22 23.085318146534167 25.954227117514595 24.198468209307656 26.761986526643582 23 18.450161646821925 33.64419434509641 22.08279590455536 25.8228481035263 24 20.058672981539576 24.82846358436852 37.821965612695934 17.290897821395973 25 15.593097583503207 25.670808315486855 36.392258132184644 22.34383596882529 26 15.213744071329854 36.52472217588241 27.298940604117416 20.96259314867032 27 17.873332727525078 34.738265968811724 27.198620565562692 20.189780738100502 28 14.018086541065436 29.6704086628772 39.80824812459396 16.5032566714634 29 13.855829389928484 24.6959091215283 39.34584463007494 22.102416858468274 30 17.48046155355458 30.13620287523831 32.76694782499013 19.616387746216976 31 29.537854200036982 26.562476688814833 23.788326979128097 20.111342132020084 32 29.791389475483076 27.024156830194208 26.040713027273576 17.14374066704914 33 27.039302036555558 27.676304895156743 24.355255002326032 20.92913806596167 34 18.667664893999376 27.755286016091894 29.66588770575441 23.911161384154315 35 19.238526149894142 25.80756726845127 31.21892689657542 23.734979685079168 36 30.55045817639961 23.168684595878425 26.647109006153475 19.633748221568492 37 20.413748953963545 30.711132992543583 29.297158442819608 19.577959610673258 38 20.91222968632243 33.73908923510378 22.17475217243292 23.173928906140862 39 19.963868510674658 31.60316304244139 26.515910830450096 21.917057616433862 40 23.139298374580285 26.743088925870317 23.65292431330052 26.464688386248874 41 16.287426178421384 24.63003877624924 26.306771353949802 32.775763691379574 42 22.94123524303083 26.97076432657405 23.290614809480083 26.797385620915033 43 22.93694033376418 26.839520941299437 25.768777456337727 24.454761268598652 44 20.25009030611853 31.112051470192654 27.187092124899575 21.45076609878924 45 16.525544990078757 36.53254343170484 22.416487749788534 24.52542382842787 46 23.229310630895046 31.0291823261319 26.28913962117092 19.452367421802137 47 23.357163298327563 26.275667168945006 26.74652485328364 23.620644679443796 48 24.806808199750353 22.423133556759034 30.191584599992495 22.578473643498118 49 21.431913707587206 21.07154821532957 32.30495121661217 25.191586860471055 50 19.055020500280072 31.948609376193815 26.45655066342785 22.539819460098258 51 18.19513445552531 33.69559762758254 23.31520881622807 24.794059100664086 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2468.0 1 2710.5 2 2953.0 3 8808.0 4 14663.0 5 10761.0 6 6859.0 7 7972.5 8 9086.0 9 10817.5 10 12549.0 11 13603.5 12 14658.0 13 14876.5 14 15095.0 15 15060.5 16 15026.0 17 14071.5 18 13117.0 19 12770.0 20 12423.0 21 12836.5 22 13250.0 23 12871.0 24 12492.0 25 11165.5 26 10867.5 27 11896.0 28 13576.5 29 15257.0 30 19355.0 31 23453.0 32 23753.5 33 24054.0 34 28006.5 35 31959.0 36 37750.0 37 43541.0 38 60001.0 39 76461.0 40 115421.5 41 154382.0 42 192930.0 43 231478.0 44 243657.5 45 255837.0 46 250534.5 47 245232.0 48 220119.0 49 195006.0 50 182863.0 51 170720.0 52 150925.5 53 131131.0 54 119906.5 55 108682.0 56 93141.0 57 77600.0 58 73039.0 59 68478.0 60 62997.0 61 57516.0 62 48695.0 63 39874.0 64 34680.0 65 29486.0 66 26412.0 67 23338.0 68 19609.5 69 15881.0 70 12637.5 71 9394.0 72 8102.0 73 6810.0 74 5604.0 75 3337.5 76 2277.0 77 1934.0 78 1591.0 79 1169.5 80 748.0 81 662.5 82 577.0 83 414.5 84 252.0 85 154.0 86 56.0 87 57.5 88 59.0 89 35.5 90 12.0 91 8.0 92 4.0 93 3.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2211921.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.310922766299797 #Duplication Level Percentage of deduplicated Percentage of total 1 82.7393741167592 15.977736633007211 2 7.5125425309843825 2.901482571887636 3 2.395842400330228 1.3879778265901006 4 1.147099664333389 0.8860621209276198 5 0.6916353938146595 0.6678058836197116 6 0.4532738172825585 0.5251881406517624 7 0.3344158590771853 0.45205151785257247 8 0.2558844277462522 0.3953091537045357 9 0.2059177822883661 0.35788161509805366 >10 1.9564366210355424 8.554832945061412 >50 0.7611852744239863 10.866541787320978 >100 1.535551813672652 54.61812565479971 >500 0.0077767357022860565 0.8633296380489606 >1k 0.0025922452340953524 0.7619381229167544 >5k 4.71317315290064E-4 0.7837363885129514 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9133 0.4128990140244611 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 8089 0.36570022166252775 No Hit GAGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCT 2433 0.10999488679749411 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.056918850175933046 0.0 2 0.0 0.0 0.0 0.2122589369150164 0.0 3 0.0 0.0 0.0 0.32686519997775687 0.0 4 0.0 0.0 0.0 0.6768777004242014 0.0 5 0.0 0.0 0.0 1.1109800033545503 0.0 6 0.0 0.0 0.0 1.9750705382335083 0.0 7 0.0 0.0 0.0 2.371920154472063 0.0 8 0.0 0.0 0.0 3.5397737984313182 0.0 9 0.0 0.0 0.0 4.140111694766675 0.0 10 0.0 0.0 0.0 5.069484850498729 0.0 11 0.0 0.0 0.0 5.727419740578438 0.0 12 0.0 0.0 0.0 6.291906446930066 0.0 13 0.0 0.0 0.0 6.566418963425909 0.0 14 0.0 0.0 0.0 6.676459059794631 0.0 15 0.0 0.0 0.0 6.778813529054609 0.0 16 0.0 0.0 0.0 6.966071573080594 0.0 17 0.0 0.0 0.0 7.161648178212513 0.0 18 0.0 0.0 0.0 7.503477746266706 0.0 19 0.0 0.0 0.0 7.621836403741363 0.0 20 1.8083828491162208E-4 0.0 0.0 7.762890265972429 0.0 21 1.8083828491162208E-4 0.0 0.0 7.93120549965392 0.0 22 2.260478561395276E-4 0.0 0.0 8.09201594451158 0.0 23 2.260478561395276E-4 0.0 0.0 8.273215905993027 0.0 24 2.260478561395276E-4 0.0 0.0 8.407850009109728 0.0 25 2.260478561395276E-4 0.0 0.0 8.520105374468619 0.0 26 2.260478561395276E-4 0.0 0.0 8.633671817393116 0.0 27 2.260478561395276E-4 0.0 0.0 8.738422393928174 0.0 28 2.260478561395276E-4 0.0 0.0 8.836753211348869 0.0 29 2.260478561395276E-4 0.0 0.0 8.946476840718995 0.0 30 2.260478561395276E-4 0.0 0.0 9.124738180070626 0.0 31 2.260478561395276E-4 0.0 0.0 9.264797431734678 0.0 32 2.260478561395276E-4 0.0 0.0 9.377730940661985 0.0 33 2.260478561395276E-4 0.0 0.0 9.48315966076546 0.0 34 2.260478561395276E-4 0.0 0.0 9.593832691131373 0.0 35 2.260478561395276E-4 0.0 0.0 9.74392846760802 0.0 36 2.260478561395276E-4 0.0 0.0 9.86784790234371 0.0 37 2.260478561395276E-4 0.0 0.0 9.99149607965203 0.0 38 2.260478561395276E-4 0.0 0.0 10.105740666144948 0.0 39 2.260478561395276E-4 0.0 0.0 10.22703794574942 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCATA 30 2.1664164E-6 45.000004 29 GTTACCC 45 3.8562575E-10 45.000004 26 ACTAGTC 60 0.0 45.000004 10 CCGTAGA 45 3.8562575E-10 45.000004 33 CCATCCG 30 2.1664164E-6 45.000004 45 CTAGTCG 60 0.0 45.000004 1 TACGACA 30 2.1664164E-6 45.000004 37 GTACTCC 30 2.1664164E-6 45.000004 42 ATCGGAC 45 3.8562575E-10 45.000004 38 ACGCGAT 20 7.0347043E-4 45.0 13 CGGCGTA 20 7.0347043E-4 45.0 24 GGTACGA 20 7.0347043E-4 45.0 21 CGAACTT 20 7.0347043E-4 45.0 34 CGAGTTA 25 3.89198E-5 45.0 25 TCCGATT 20 7.0347043E-4 45.0 24 ACGTTAG 40 6.8193913E-9 45.0 1 GCGAACT 20 7.0347043E-4 45.0 33 TTCGTTA 35 1.2126111E-7 45.0 15 ATTCGTC 25 3.89198E-5 45.0 14 CGTTCCC 20 7.0347043E-4 45.0 18 >>END_MODULE