##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547678_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2882464 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.440034290107352 31.0 31.0 33.0 30.0 34.0 2 31.863927875595323 31.0 31.0 34.0 30.0 34.0 3 31.895351338299456 31.0 31.0 34.0 30.0 34.0 4 35.647596639541725 37.0 35.0 37.0 33.0 37.0 5 35.55750878415134 37.0 35.0 37.0 33.0 37.0 6 35.61336689721016 37.0 35.0 37.0 33.0 37.0 7 36.03075667206945 37.0 35.0 37.0 35.0 37.0 8 36.048437725501515 37.0 35.0 37.0 35.0 37.0 9 37.79066833098349 39.0 38.0 39.0 35.0 39.0 10 37.16876810950631 39.0 37.0 39.0 33.0 39.0 11 36.94587269780299 39.0 37.0 39.0 33.0 39.0 12 36.63877536718585 39.0 35.0 39.0 32.0 39.0 13 36.54181214405453 39.0 35.0 39.0 32.0 39.0 14 37.66783418630727 40.0 36.0 41.0 32.0 41.0 15 37.774996322590674 40.0 36.0 41.0 33.0 41.0 16 37.80956397026988 40.0 36.0 41.0 33.0 41.0 17 37.72112331671792 40.0 36.0 41.0 33.0 41.0 18 37.49376956659302 39.0 36.0 41.0 32.0 41.0 19 37.31227658003708 39.0 36.0 41.0 32.0 41.0 20 37.07457473883455 39.0 35.0 41.0 32.0 41.0 21 36.96518325987766 38.0 35.0 41.0 32.0 41.0 22 36.88653596367552 38.0 35.0 41.0 32.0 41.0 23 36.77066357116689 38.0 35.0 40.0 31.0 41.0 24 36.63340634956759 38.0 35.0 40.0 31.0 41.0 25 36.49231907146108 38.0 35.0 40.0 31.0 41.0 26 36.34104675721883 38.0 35.0 40.0 31.0 41.0 27 36.28813577550318 38.0 35.0 40.0 31.0 41.0 28 36.27498313942516 38.0 35.0 40.0 31.0 41.0 29 36.15100032472218 38.0 35.0 40.0 30.0 41.0 30 36.09543675133497 38.0 35.0 40.0 30.0 41.0 31 35.87555265217536 38.0 35.0 40.0 30.0 41.0 32 35.485849953373226 38.0 34.0 40.0 27.0 41.0 33 35.073342112858995 38.0 34.0 40.0 24.0 41.0 34 34.56302975509841 38.0 34.0 40.0 22.0 41.0 35 34.262561128256934 38.0 33.0 40.0 20.0 41.0 36 34.03354872775514 38.0 33.0 40.0 18.0 41.0 37 33.767970042297144 37.0 33.0 40.0 18.0 41.0 38 33.808656760327274 37.0 33.0 40.0 18.0 41.0 39 33.689758831333194 37.0 33.0 40.0 18.0 41.0 40 33.55694294881046 37.0 33.0 40.0 17.0 41.0 41 33.463266496997015 37.0 33.0 40.0 16.0 41.0 42 33.4113393957392 37.0 33.0 40.0 15.0 41.0 43 33.326101904481725 36.0 33.0 40.0 15.0 41.0 44 33.16221642317129 36.0 33.0 40.0 15.0 41.0 45 33.099500635567345 36.0 33.0 40.0 15.0 41.0 46 32.91417655172797 35.0 32.0 40.0 15.0 41.0 47 32.93179134240705 35.0 32.0 40.0 15.0 41.0 48 32.746977238917815 35.0 32.0 40.0 15.0 41.0 49 32.7141435244291 35.0 32.0 40.0 15.0 41.0 50 32.58105044850517 35.0 31.0 40.0 14.0 41.0 51 31.931680326276407 35.0 31.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 4.0 12 6.0 13 12.0 14 32.0 15 120.0 16 274.0 17 780.0 18 1821.0 19 3506.0 20 5962.0 21 9685.0 22 14568.0 23 22077.0 24 33960.0 25 54619.0 26 77316.0 27 83803.0 28 76577.0 29 71647.0 30 75573.0 31 85304.0 32 101951.0 33 128632.0 34 195806.0 35 274688.0 36 244380.0 37 287796.0 38 394617.0 39 636567.0 40 378.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.44813881456976 22.65919019283502 26.372540992706238 21.520129999888983 2 38.31173607025101 23.67960189615551 25.345052011057206 12.663610022536275 3 26.07019549940606 23.824720794431432 36.89395600430743 13.21112770185508 4 22.93315718773938 26.147698635611754 36.58949426601686 14.329649910632014 5 21.07953473139647 29.829444530790322 35.52085993094797 13.570160806865236 6 19.309729453689624 37.69427822862662 32.832222709459685 10.163769608224076 7 80.64218668472529 3.3981343739245315 14.346753333259324 1.6129256080908556 8 80.97225151814558 2.8537737158209087 14.15004662677487 2.023928139258634 9 75.6744576862018 4.8748570667317965 16.323326154290218 3.1273590927761803 10 37.28934689210342 25.14841468965441 24.12328480078155 13.438953617460617 11 29.425172352542823 25.224911742176136 29.42801714089057 15.921898764390466 12 24.735122450792097 22.17977397115801 34.7631054542225 18.32199812382739 13 21.088416021847976 26.236650310290084 36.04586215127058 16.62907151659136 14 18.92290762347769 28.22439412946701 36.0315688244502 16.821129422605104 15 18.26624721071972 23.949093553293295 40.756935732761974 17.02772350322502 16 20.771499661400803 22.497522952585012 38.87875095751412 17.85222642850006 17 20.670613752678264 23.391515037134898 34.29860702510075 21.639264185086095 18 22.577350489026056 23.450145431131144 35.46046021736958 18.512043862473217 19 24.572518511939784 25.77607213828169 31.24736336689721 18.40404598288131 20 25.702974954760926 24.607696748337535 31.040942748981426 18.648385547920114 21 23.213334147451626 25.977635800481806 32.616782030929095 18.192248021137473 22 22.869947378354073 23.616218624066075 32.423995581558 21.08983841602185 23 21.3313331927129 27.17858748626175 31.501833153857255 19.98824616716809 24 20.89583772772184 25.297002842012944 35.45726850361358 18.349890926651643 25 21.245989542280494 26.107073670304292 33.689197852948034 18.957738934467177 26 19.899051644703974 27.972422205446453 32.32526061036668 19.803265539482886 27 20.457879092332114 26.43314886152958 33.02750702177026 20.081465024368043 28 19.741859742220544 27.034439979128965 34.61382345104744 18.60987682760305 29 20.415068496952607 25.763201205635177 33.83792477546987 19.983805521942337 30 21.135563184830755 26.829441755387055 33.502239750435734 18.53275530934645 31 23.50343317384016 26.873986977807874 30.696931514149007 18.92564833420296 32 23.983161628384604 26.97972984224608 30.074755486972254 18.96235304239706 33 23.1334025333881 27.450715776502328 29.15359914295547 20.2622825471541 34 21.077800104355163 29.06745756408406 30.04394851071861 19.810793820842168 35 22.27254182532722 28.834913462926163 29.09243619347891 19.800108518267702 36 24.526169277396008 28.969069518301012 26.827152047692532 19.67760915661046 37 22.834248753843934 29.725124060525992 27.669278783707274 19.7713484019228 38 22.38074786016408 30.074998334758043 27.600761015575564 19.943492789502315 39 22.445761681672348 29.193356794742275 27.40169521631493 20.959186307270446 40 23.757868268259376 27.711117987943652 27.543344860508235 20.987668883288745 41 20.5184175760738 27.980748415244733 28.192650454611055 23.308183554070403 42 22.332559920956516 28.61197919557712 27.29602173695838 21.75943914650799 43 22.273409138847875 28.207290706839704 28.325245345648725 21.194054808663697 44 22.410687522897078 29.09455243846931 27.955110627574186 20.539649411059425 45 20.894519411170442 30.07409632869656 26.846822718340974 22.18456154179202 46 22.43781708982315 29.266627440967174 26.93494177203948 21.3606136971702 47 22.047491312987777 28.72091377377133 28.44878548353076 20.782809429710134 48 22.443506666518644 28.0684164659125 28.487502359092776 21.00057450847608 49 21.92249408839104 27.56488892836129 28.54925508176338 21.963361901484284 50 20.6466758995082 29.128204203070705 28.83834802446795 21.38677187295314 51 20.85555968782264 29.628089023835162 27.641524751046326 21.87482653729587 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1836.0 1 2481.0 2 3126.0 3 40007.0 4 76888.0 5 52040.0 6 27192.0 7 28621.0 8 30050.0 9 32636.5 10 35223.0 11 37554.5 12 39886.0 13 40392.5 14 40899.0 15 39596.0 16 38293.0 17 36732.0 18 35171.0 19 33100.5 20 31030.0 21 29320.0 22 27610.0 23 27233.5 24 26857.0 25 27238.5 26 28427.0 27 29234.0 28 32445.0 29 35656.0 30 38377.5 31 41099.0 32 46684.5 33 52270.0 34 60421.5 35 68573.0 36 75221.5 37 81870.0 38 90056.0 39 98242.0 40 112844.5 41 127447.0 42 141617.0 43 155787.0 44 166380.0 45 176973.0 46 188986.5 47 201000.0 48 202371.5 49 203743.0 50 200105.5 51 196468.0 52 184787.5 53 173107.0 54 161887.0 55 150667.0 56 141465.5 57 132264.0 58 125459.5 59 118655.0 60 110078.0 61 101501.0 62 91545.5 63 81590.0 64 73376.0 65 65162.0 66 56342.0 67 47522.0 68 40341.5 69 33161.0 70 29267.5 71 25374.0 72 21520.0 73 17666.0 74 14688.0 75 9657.0 76 7604.0 77 5716.5 78 3829.0 79 2622.5 80 1416.0 81 1016.0 82 616.0 83 458.5 84 301.0 85 232.0 86 163.0 87 113.0 88 63.0 89 46.5 90 30.0 91 19.5 92 9.0 93 9.5 94 10.0 95 5.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2882464.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.73200643312996 #Duplication Level Percentage of deduplicated Percentage of total 1 77.10599350728535 22.92515894991485 2 6.960781440950169 4.139159971638841 3 3.1322821936800507 2.793871029986211 4 1.7966471097786016 2.1367169370400694 5 1.2914240018793615 1.9198313365887807 6 0.9335774779221169 1.665427894764337 7 0.7489512900758455 1.5587477202245217 8 0.6265235864461068 1.4902242642178642 9 0.5324156888597983 1.4246808017650956 >10 6.08590898569134 40.650002620665326 >50 0.7218226764169994 13.874282880389815 >100 0.06059305727162959 2.698098656916411 >500 0.002131604129503903 0.43409633431443306 >1k 8.289571614736804E-4 0.39927426645513875 >5k 0.0 0.0 >10k+ 1.184224516390972E-4 1.8904263351184176 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 53691 1.8626772094985402 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.469254082618204E-5 0.0 0.0 0.02699079676276963 0.0 2 3.469254082618204E-5 0.0 0.0 0.10553470919324578 0.0 3 3.469254082618204E-5 0.0 0.0 0.20156366220011768 0.0 4 3.469254082618204E-5 0.0 0.0 0.32198147140779554 0.0 5 3.469254082618204E-5 0.0 0.0 0.5745084760815746 0.0 6 3.469254082618204E-5 0.0 0.0 1.21888772938708 0.0 7 3.469254082618204E-5 0.0 0.0 1.6161173218468643 0.0 8 3.469254082618204E-5 0.0 0.0 2.3567683759450246 0.0 9 3.469254082618204E-5 0.0 0.0 2.8492983780543315 0.0 10 1.0407762247854614E-4 0.0 0.0 3.461031950442399 0.0 11 1.0407762247854614E-4 0.0 0.0 3.8101776813170956 0.0 12 1.0407762247854614E-4 0.0 0.0 4.122965629405953 0.0 13 1.0407762247854614E-4 0.0 0.0 4.3576606680950745 0.0 14 1.0407762247854614E-4 0.0 0.0 4.4999000854824205 0.0 15 1.0407762247854614E-4 0.0 0.0 4.600022758306782 0.0 16 1.0407762247854614E-4 0.0 0.0 4.7271015353530865 0.0 17 1.0407762247854614E-4 0.0 0.0 4.856504712634746 0.0 18 1.0407762247854614E-4 0.0 0.0 5.0607397004784795 0.0 19 1.0407762247854614E-4 0.0 0.0 5.165060170742809 0.0 20 1.3877016330472817E-4 0.0 0.0 5.279614940550862 0.0 21 1.3877016330472817E-4 0.0 0.0 5.399789901972756 0.0 22 1.3877016330472817E-4 0.0 0.0 5.527007449182366 0.0 23 1.3877016330472817E-4 0.0 0.0 5.66917748148806 0.0 24 1.3877016330472817E-4 0.0 0.0 5.7931686224008345 0.0 25 1.3877016330472817E-4 0.0 0.0 5.902450126003308 0.0 26 1.3877016330472817E-4 0.0 0.0 6.01301525361635 0.0 27 1.3877016330472817E-4 0.0 0.0 6.136208466090123 0.0 28 1.3877016330472817E-4 1.3877016330472817E-4 0.0 6.254232489980795 0.0 29 1.3877016330472817E-4 1.3877016330472817E-4 0.0 6.380443953506444 0.0 30 1.3877016330472817E-4 1.3877016330472817E-4 0.0 6.564175649721904 0.0 31 1.7346270413091022E-4 1.3877016330472817E-4 0.0 6.704021281792245 0.0 32 1.7346270413091022E-4 1.3877016330472817E-4 0.0 6.857431697325621 0.0 33 1.7346270413091022E-4 1.3877016330472817E-4 0.0 7.003591371826326 0.0 34 1.7346270413091022E-4 1.3877016330472817E-4 0.0 7.149612276163727 0.0 35 1.7346270413091022E-4 1.3877016330472817E-4 0.0 7.304757318738413 0.0 36 1.7346270413091022E-4 1.3877016330472817E-4 0.0 7.452131232168034 0.0 37 1.7346270413091022E-4 1.3877016330472817E-4 0.0 7.606235498517934 0.0 38 1.7346270413091022E-4 1.3877016330472817E-4 0.0 7.77546571266805 0.0 39 1.7346270413091022E-4 1.3877016330472817E-4 0.0 8.026500938086304 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 34345 0.0 43.5915 1 TATTACG 80 0.0 42.1875 1 GTTTTTT 39220 0.0 38.723866 2 TACGGGA 765 0.0 37.941174 4 CACGACC 1485 0.0 37.424244 27 GCGATAT 325 0.0 37.384617 9 ACACGAC 1490 0.0 36.996647 26 GCGATAC 195 0.0 36.923077 9 GCGTTAG 220 0.0 36.818184 1 TAGGGAC 2375 0.0 36.66316 5 GGGCGAT 7135 0.0 36.485634 7 TATAGCG 105 0.0 36.42857 1 GGCGATA 1350 0.0 36.166668 8 GACACGA 1515 0.0 36.08911 25 CGGTCTA 75 1.8189894E-12 36.000004 31 CGTATGG 425 0.0 36.0 2 AATCGTA 25 0.0021076347 36.0 8 AGGGCGA 3540 0.0 35.911015 6 GCGAGAC 1530 0.0 35.88235 21 ACGGGTA 365 0.0 35.753426 5 >>END_MODULE