##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547677_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2338548 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.470363233938325 31.0 31.0 33.0 30.0 34.0 2 31.88777053111589 31.0 31.0 34.0 30.0 34.0 3 32.00361378085889 33.0 31.0 34.0 30.0 34.0 4 35.71858392472594 37.0 35.0 37.0 33.0 37.0 5 35.622517476656455 37.0 35.0 37.0 33.0 37.0 6 35.667733140393096 37.0 35.0 37.0 33.0 37.0 7 36.02876998889909 37.0 35.0 37.0 35.0 37.0 8 36.036205799496095 37.0 35.0 37.0 35.0 37.0 9 37.78249281177893 39.0 38.0 39.0 35.0 39.0 10 37.204046699062836 39.0 37.0 39.0 33.0 39.0 11 36.96117719200119 39.0 37.0 39.0 33.0 39.0 12 36.56661184632515 39.0 35.0 39.0 32.0 39.0 13 36.45659229573222 39.0 35.0 39.0 32.0 39.0 14 37.537589136506924 40.0 36.0 41.0 32.0 41.0 15 37.64205310303659 40.0 36.0 41.0 32.0 41.0 16 37.67298126871888 40.0 36.0 41.0 33.0 41.0 17 37.56329312034647 40.0 36.0 41.0 32.0 41.0 18 37.432080504655026 39.0 36.0 41.0 32.0 41.0 19 37.3508985062526 39.0 36.0 41.0 32.0 41.0 20 37.246450789122136 39.0 35.0 41.0 32.0 41.0 21 37.12824966603208 39.0 35.0 41.0 32.0 41.0 22 37.05350798871778 39.0 35.0 41.0 32.0 41.0 23 36.91629079240623 39.0 35.0 41.0 31.0 41.0 24 36.795514994774535 38.0 35.0 41.0 31.0 41.0 25 36.65958321146284 38.0 35.0 40.0 31.0 41.0 26 36.495957320525385 38.0 35.0 40.0 31.0 41.0 27 36.47146691023661 38.0 35.0 40.0 31.0 41.0 28 36.46227958545217 38.0 35.0 40.0 31.0 41.0 29 36.43150792714111 38.0 35.0 41.0 30.0 41.0 30 36.41700320027641 38.0 35.0 41.0 30.0 41.0 31 36.28051508885 38.0 35.0 41.0 30.0 41.0 32 36.04590840128148 38.0 35.0 41.0 30.0 41.0 33 35.85759283110716 38.0 35.0 41.0 29.0 41.0 34 35.557338570771265 38.0 35.0 40.0 27.0 41.0 35 35.384923037714 38.0 34.0 40.0 26.0 41.0 36 35.220979000644846 38.0 34.0 40.0 26.0 41.0 37 34.990004053797485 38.0 34.0 40.0 25.0 41.0 38 35.02674822154602 38.0 34.0 40.0 25.0 41.0 39 34.89696512536839 37.0 34.0 40.0 24.0 41.0 40 34.73364626255266 37.0 34.0 40.0 24.0 41.0 41 34.64353778498453 37.0 34.0 40.0 24.0 41.0 42 34.586450652285095 37.0 34.0 40.0 23.0 41.0 43 34.49484936806942 37.0 33.0 40.0 23.0 41.0 44 34.31611110826034 36.0 33.0 40.0 23.0 41.0 45 34.222545784820326 36.0 33.0 40.0 23.0 41.0 46 34.03677067992618 36.0 33.0 40.0 23.0 41.0 47 34.03230979223005 36.0 33.0 40.0 23.0 41.0 48 33.857809204685985 35.0 33.0 40.0 23.0 41.0 49 33.804704030022044 35.0 33.0 40.0 23.0 41.0 50 33.67071233945166 35.0 33.0 40.0 23.0 41.0 51 32.98411706751369 35.0 32.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 5.0 11 3.0 12 2.0 13 10.0 14 26.0 15 75.0 16 219.0 17 526.0 18 1058.0 19 2113.0 20 3662.0 21 5720.0 22 8881.0 23 12777.0 24 18782.0 25 27825.0 26 38981.0 27 45963.0 28 49146.0 29 52542.0 30 59443.0 31 69913.0 32 85646.0 33 109984.0 34 173911.0 35 235159.0 36 200653.0 37 254917.0 38 353119.0 39 527196.0 40 290.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.548509588000755 23.44048529258326 26.838961612077238 16.172043507338742 2 34.38291623691282 24.348356330509358 27.30330957500124 13.96541785757658 3 28.94116349119197 25.696329517290216 31.516436694906414 13.846070296611401 4 25.324474845074807 28.348958413511287 31.126921491455384 15.199645249958522 5 23.26571872803124 31.366429083345732 30.3196684438378 15.048183744785227 6 22.107863511888574 39.9945179658489 27.155440042282645 10.742178479979884 7 86.26348486325703 3.6626145796451475 8.33979033143643 1.7341102256613932 8 86.3350249813132 3.230893699851361 8.313449200101944 2.120632118733505 9 80.82053479338461 5.039451830794151 10.64690568677658 3.493107689044655 10 42.47537360789686 26.11197204419152 17.574067327247505 13.838587020664104 11 34.23872419980261 25.542002986468525 23.69773893886292 16.52153387486594 12 28.34575129524816 23.148252676447097 29.252125677984804 19.253870350319943 13 24.022641399706142 26.95625661735402 30.510940977050716 18.510161005889124 14 21.973292829567747 27.346627052341884 31.767575435697708 18.912504682392665 15 21.410764286215205 22.30794492993088 36.561618576997354 19.71967220685656 16 24.665818276982126 21.580442223123068 33.52204017193575 20.231699327959056 17 24.59936678657013 22.0394877505187 29.531016682146355 23.830128780764817 18 26.851405230938173 21.702825856044004 30.39373149492762 21.0520374180902 19 28.180606085485522 24.102135171054858 26.575849629770264 21.14140911368935 20 30.766612444987228 23.28556009968579 25.927797932734332 20.02002952259265 21 27.882814464359935 24.72072414164687 27.434074476983156 19.96238691701004 22 27.379852797547883 22.090031934345586 27.494197254022584 23.035918014083954 23 25.308781346373905 25.73481493644774 26.939365794501548 22.017037922676806 24 24.632549770199287 23.576039491171443 30.979949951850465 20.811460786778806 25 24.94941305459627 24.41130137162034 28.800306857075412 21.838978716707974 26 23.866091266888684 25.523529985272912 27.744523524853882 22.865855222984518 27 23.364840063150297 24.648585361514925 28.78127795538086 23.20529661995392 28 22.062579002013216 26.068996659465615 29.871911972728377 21.996512365792793 29 23.87939011728645 24.700540677377585 29.05345539197827 22.36661381335769 30 24.515938950151973 24.660173748839025 30.026922688779536 20.79696461222947 31 27.014455123435567 24.99448375658742 26.760109264381143 21.230951855595865 32 27.290181770910838 25.052425693207926 26.432769393657946 21.224623142223294 33 26.15088507911747 25.936307486525827 25.48795235334062 22.424855081016084 34 23.842700684356274 27.09305090167061 27.968337618043332 21.095910795929782 35 24.115348498298943 27.429370703530566 27.236687038281875 21.218593759888616 36 26.319622261334814 28.3179990318779 24.61001441920371 20.75236428758358 37 24.67099242777997 27.62739956588447 25.82705165769529 21.87455634864027 38 25.10827231256318 27.873962817953707 25.106861180527407 21.91090368895571 39 24.942015301802655 26.941888727535208 24.875307241929608 23.240788728732532 40 26.22828353320094 25.587501304228095 25.34679638818617 22.837418774384787 41 22.6836053824852 25.683629328968234 26.200787839291735 25.431977449254838 42 24.797780503115607 25.96944770857814 25.01719015389036 24.215581634415887 43 24.273780140497436 25.532381631679147 26.48694831151638 23.70688991630704 44 24.196681017451855 26.118771134909352 26.7891871366335 22.895360711005292 45 23.069998990826786 26.716834548617346 25.792799634645085 24.420366825910776 46 24.22096959309794 26.341131334486185 26.04714549369951 23.390753578716367 47 23.701886811816564 26.634432990043393 27.52011076958865 22.14356942855139 48 24.375680978111202 25.573518268600857 27.52960383964751 22.52119691364043 49 24.21699276645166 25.204058244688582 27.485388369193192 23.09356061966656 50 23.050285903902765 27.064571691494038 27.64074117785908 22.244401226744117 51 23.253275109170303 26.935731060470005 26.382610064022632 23.42838376633706 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1182.0 1 1803.0 2 2424.0 3 18589.5 4 34755.0 5 23907.0 6 13059.0 7 13161.5 8 13264.0 9 13667.5 10 14071.0 11 14165.0 12 14259.0 13 14125.5 14 13992.0 15 13577.0 16 13162.0 17 12692.5 18 12223.0 19 12071.0 20 11919.0 21 11738.0 22 11557.0 23 12201.5 24 12846.0 25 13438.5 26 16288.0 27 18545.0 28 20292.0 29 22039.0 30 25956.5 31 29874.0 32 33017.0 33 36160.0 34 43668.0 35 51176.0 36 56129.0 37 61082.0 38 66475.5 39 71869.0 40 82416.5 41 92964.0 42 104325.5 43 115687.0 44 120113.5 45 124540.0 46 134276.0 47 144012.0 48 148901.5 49 153791.0 50 157006.0 51 160221.0 52 157836.0 53 155451.0 54 151494.5 55 147538.0 56 141696.0 57 135854.0 58 132132.0 59 128410.0 60 123245.5 61 118081.0 62 111140.5 63 104200.0 64 94526.5 65 84853.0 66 73443.0 67 62033.0 68 53405.0 69 44777.0 70 38344.5 71 31912.0 72 27658.5 73 23405.0 74 19893.5 75 13836.5 76 11291.0 77 8274.5 78 5258.0 79 3861.5 80 2465.0 81 1767.5 82 1070.0 83 801.5 84 533.0 85 357.0 86 181.0 87 123.5 88 66.0 89 57.0 90 48.0 91 35.0 92 22.0 93 16.0 94 10.0 95 7.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2338548.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.576725139009202 #Duplication Level Percentage of deduplicated Percentage of total 1 75.58217611926645 18.575623678913967 2 5.985385322996977 2.9420233986871303 3 2.4737368765156744 1.8238905384107065 4 1.5605268340720104 1.5341055629214406 5 1.170021102671048 1.4377643523593406 6 0.9482941564267782 1.3983578900057712 7 0.8041961853316933 1.383515602331571 8 0.710936911623965 1.3978000854526609 9 0.6274229943300955 1.3878002229790398 >10 9.364445213073957 53.342538514455605 >50 0.7168825049481151 11.071741793030625 >100 0.053159599749943706 2.2390915510947287 >500 0.001936123057836745 0.3284563665284715 >1k 7.040447483042709E-4 0.22649776572409808 >5k 0.0 0.0 >10k+ 1.7601118707606772E-4 0.910792677104829 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21055 0.9003450004019589 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2828473052509505E-4 0.0 0.0 0.02621284660396109 0.0 2 1.2828473052509505E-4 0.0 0.0 0.0909538739422924 0.0 3 1.2828473052509505E-4 0.0 0.0 0.16215189938372015 0.0 4 1.2828473052509505E-4 0.0 0.0 0.2516518797133948 0.0 5 1.2828473052509505E-4 0.0 0.0 0.4068764036487598 0.0 6 1.2828473052509505E-4 0.0 0.0 0.838084144520446 0.0 7 1.2828473052509505E-4 0.0 0.0 1.0587338810236095 0.0 8 1.2828473052509505E-4 0.0 0.0 1.5375780184969476 0.0 9 1.2828473052509505E-4 0.0 0.0 1.8440930012982415 0.0 10 1.2828473052509505E-4 0.0 0.0 2.259692766622708 0.0 11 1.2828473052509505E-4 0.0 0.0 2.5381561550158476 0.0 12 1.2828473052509505E-4 0.0 0.0 2.784120745009296 0.0 13 1.2828473052509505E-4 0.0 0.0 2.949437001079302 0.0 14 1.2828473052509505E-4 0.0 0.0 3.0602322466761427 0.0 15 1.2828473052509505E-4 0.0 0.0 3.1434462752100876 0.0 16 1.2828473052509505E-4 0.0 0.0 3.251975157234318 0.0 17 1.2828473052509505E-4 0.0 0.0 3.355885788959645 0.0 18 1.2828473052509505E-4 0.0 0.0 3.5150443779644465 0.0 19 1.2828473052509505E-4 0.0 0.0 3.6105737406288005 0.0 20 2.565694610501901E-4 0.0 0.0 3.7012710451100426 0.0 21 2.565694610501901E-4 0.0 0.0 3.8032146443006516 0.0 22 2.993310378918885E-4 0.0 0.0 3.9092633548680635 0.0 23 2.993310378918885E-4 0.0 0.0 4.0286109158332435 0.0 24 2.993310378918885E-4 0.0 0.0 4.133676110133297 0.0 25 2.993310378918885E-4 0.0 0.0 4.225613500342948 0.0 26 2.993310378918885E-4 0.0 0.0 4.321570478775719 0.0 27 2.993310378918885E-4 0.0 0.0 4.432365724372559 0.0 28 2.993310378918885E-4 0.0 0.0 4.542262976855724 0.0 29 2.993310378918885E-4 0.0 0.0 4.648268925846295 0.0 30 2.993310378918885E-4 0.0 0.0 4.798917961059598 0.0 31 2.993310378918885E-4 0.0 0.0 4.91681162841216 0.0 32 2.993310378918885E-4 0.0 0.0 5.105860559629308 0.0 33 2.993310378918885E-4 0.0 0.0 5.236967554225956 0.0 34 2.993310378918885E-4 0.0 0.0 5.357811770380595 0.0 35 2.993310378918885E-4 0.0 0.0 5.48079406537732 0.0 36 2.993310378918885E-4 0.0 0.0 5.592316257780469 0.0 37 2.993310378918885E-4 0.0 0.0 5.715555122238244 0.0 38 2.993310378918885E-4 0.0 0.0 5.859405066733717 0.0 39 2.993310378918885E-4 0.0 0.0 6.077189777588487 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 105 0.0 42.857143 1 CGTTTTT 13245 0.0 41.704414 1 CGTTAGG 290 0.0 38.793102 2 GGGCGAT 6365 0.0 38.248234 7 AGGGCGA 3315 0.0 37.873302 6 GCGATAC 155 0.0 37.741936 9 CACGACC 1885 0.0 37.12202 27 ATACTAT 1595 0.0 36.959248 45 ACGGGAT 495 0.0 36.81818 5 GGACTAA 1895 0.0 36.56992 8 TATACTA 1625 0.0 36.276924 44 GCCCTAC 1725 0.0 36.26087 26 ACTAATC 1770 0.0 36.228817 10 CGACCAA 1935 0.0 36.04651 29 TAATCGT 275 0.0 36.0 21 CTAATCC 1790 0.0 35.949722 11 GACCGAT 1715 0.0 35.94752 9 GACTAAT 1795 0.0 35.849583 9 CGTAAGG 415 0.0 35.78313 2 GGCGATA 1140 0.0 35.723686 8 >>END_MODULE