##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547675_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4084813 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.389412440667417 31.0 31.0 33.0 30.0 34.0 2 31.799086029152374 31.0 31.0 34.0 30.0 34.0 3 31.949482387565844 31.0 31.0 34.0 30.0 34.0 4 35.65064055563865 37.0 35.0 37.0 33.0 37.0 5 35.5266434473255 37.0 35.0 37.0 33.0 37.0 6 35.57608928487057 37.0 35.0 37.0 33.0 37.0 7 35.96507379897195 37.0 35.0 37.0 35.0 37.0 8 35.97357406569162 37.0 35.0 37.0 35.0 37.0 9 37.71122937573887 39.0 37.0 39.0 35.0 39.0 10 37.101600734231894 39.0 37.0 39.0 33.0 39.0 11 36.82141826321058 39.0 37.0 39.0 32.0 39.0 12 36.25132411202178 38.0 35.0 39.0 32.0 39.0 13 36.01525871563766 38.0 35.0 39.0 31.0 39.0 14 37.04888204184623 39.0 35.0 41.0 31.0 41.0 15 37.22441688273123 39.0 35.0 41.0 32.0 41.0 16 37.31295214738104 39.0 35.0 41.0 32.0 41.0 17 37.25447603109371 39.0 35.0 41.0 32.0 41.0 18 37.1488893126809 39.0 35.0 41.0 32.0 41.0 19 37.10178238269414 39.0 35.0 41.0 32.0 41.0 20 37.01963786347135 39.0 35.0 41.0 32.0 41.0 21 36.8748598773065 38.0 35.0 41.0 31.0 41.0 22 36.776084241800056 38.0 35.0 41.0 31.0 41.0 23 36.67192500611411 38.0 35.0 41.0 31.0 41.0 24 36.54879354330296 38.0 35.0 40.0 31.0 41.0 25 36.38897986272566 38.0 35.0 40.0 31.0 41.0 26 36.219776523429594 38.0 35.0 40.0 30.0 41.0 27 36.19523243781294 38.0 35.0 40.0 30.0 41.0 28 36.224631825251244 38.0 35.0 40.0 30.0 41.0 29 36.2069441122519 38.0 35.0 40.0 30.0 41.0 30 36.23772422385064 38.0 35.0 40.0 30.0 41.0 31 36.119187341011695 38.0 35.0 40.0 30.0 41.0 32 35.92599122652616 38.0 35.0 40.0 30.0 41.0 33 35.819294542981524 38.0 35.0 40.0 29.0 41.0 34 35.624687837607254 38.0 35.0 40.0 29.0 41.0 35 35.525047046217296 38.0 34.0 40.0 28.0 41.0 36 35.37390769173521 38.0 34.0 40.0 27.0 41.0 37 35.10620828909426 37.0 34.0 40.0 26.0 41.0 38 35.17228279483051 37.0 34.0 40.0 27.0 41.0 39 35.04098008892941 37.0 34.0 40.0 26.0 41.0 40 34.86559898825234 37.0 34.0 40.0 25.0 41.0 41 34.79387844682241 37.0 34.0 40.0 25.0 41.0 42 34.73960937746722 37.0 34.0 40.0 25.0 41.0 43 34.650151181951294 36.0 34.0 40.0 25.0 41.0 44 34.48487140047782 36.0 33.0 40.0 24.0 41.0 45 34.423709481927325 36.0 33.0 40.0 24.0 41.0 46 34.23829413978069 36.0 33.0 40.0 23.0 41.0 47 34.24430077949713 35.0 33.0 40.0 24.0 41.0 48 34.07799255437152 35.0 33.0 40.0 23.0 41.0 49 34.04425490224399 35.0 33.0 40.0 24.0 41.0 50 33.877881313049095 35.0 33.0 39.0 24.0 41.0 51 33.16750485273133 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 6.0 11 4.0 12 6.0 13 12.0 14 44.0 15 135.0 16 382.0 17 1046.0 18 2264.0 19 4256.0 20 7368.0 21 11196.0 22 16523.0 23 23963.0 24 33866.0 25 46210.0 26 59310.0 27 70829.0 28 79348.0 29 91196.0 30 106895.0 31 128827.0 32 158038.0 33 203217.0 34 333173.0 35 494825.0 36 330169.0 37 409650.0 38 570413.0 39 901100.0 40 541.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.753711614215874 24.17258758234465 28.503801765221564 13.569899038217907 2 30.857716130456893 26.0780603665333 28.9386074711376 14.125616031872207 3 28.524586070402734 26.00273256082959 31.395096911413077 14.077584457354597 4 25.503174808736656 28.605226236794685 30.195213342691574 15.696385611777085 5 23.53613249859908 32.378691509256356 29.262269778322782 14.822906213821781 6 22.14723170926062 41.26039551871774 25.86732856559162 10.725044206430013 7 87.48410269943814 4.483852749195618 6.192670264220173 1.8393742871460699 8 87.90625176721676 3.772926692115404 5.891163194006678 2.429658346661157 9 82.51467080622785 5.465660239526264 8.411156153292696 3.608512800953189 10 47.04122318451297 23.521394981851067 14.938994759368422 14.498387074267537 11 38.301826791091784 23.943397164080707 21.55143944165865 16.20333660316886 12 33.92968050189813 22.43258136908593 25.639533560043017 17.998204568972927 13 23.82226554801897 30.933509073732385 27.450338607911796 17.793886770336854 14 20.634947058776007 32.63916854945379 28.559251059962843 18.166633331807354 15 19.56378419281372 23.324005284942054 39.082009384517725 18.0302011377265 16 21.516333795451594 21.061184441001338 36.93407752080695 20.48840424274012 17 22.785204610345687 21.060229684932946 27.38370153052294 28.77086417419843 18 24.8490444972634 23.06940366670396 30.16255578896757 21.918996047065068 19 28.331725344587376 25.493088667706452 24.982881713312214 21.192304274393955 20 30.669849513306975 23.931940091259992 24.010230088868205 21.38798030656483 21 26.464565207758596 26.574925216894872 26.236990530533465 20.72351904481307 22 26.574533522097582 23.722750588582635 25.534339026045988 24.168376863273792 23 24.0990713650784 27.685943028481354 24.339890222636875 23.875095383803373 24 24.873451979319494 24.266741219243084 30.943619695687413 19.916187105750005 25 22.861095477320504 25.125238291202066 28.872655859644002 23.141010371833424 26 21.30366800144829 29.388273098425806 26.24827623688037 23.05978266324554 27 22.097706798328346 27.966665793513677 26.959814317081342 22.97581309107663 28 20.600233107366236 26.951050145991996 31.343686969268852 21.10502977737292 29 21.37304694241817 24.453628599399778 31.21004560061868 22.963278857563367 30 22.60061843712307 26.382235857553333 28.99116801674887 22.025977688574727 31 26.78061394732146 26.502535122170833 24.555542689469505 22.161308241038206 32 27.850577247967045 26.138748579188327 24.372817066534015 21.63785710631062 33 26.764627903407085 27.029242219900883 24.26610471519749 21.940025161494543 34 22.15770954508811 26.752509845615947 27.052205327391977 24.03757528190397 35 22.466291602577645 26.227100236901908 28.16880478983983 23.137803370680615 36 27.15801188450977 25.88825975632177 25.271683183538634 21.682045175629828 37 23.528984068548546 28.156784655748012 26.34409457666728 21.97013669903616 38 23.623235629146304 28.117003152898306 24.977887604646774 23.281873613308615 39 23.66776643141314 28.235368424454194 24.644579813078344 23.452285331054323 40 24.950468968836518 25.369851692109286 25.557008362439117 24.122670976615083 41 21.574231182675927 24.485796534627166 26.949801618825635 26.99017066387127 42 24.31998723074961 25.92588693778638 24.699588451172673 25.054537380291336 43 23.68071684064852 25.731802165729494 26.250577443814443 24.33690354980754 44 23.314384281483633 27.642146653959436 26.4424834135614 22.60098565099553 45 21.83294559628556 29.20016167202758 24.869706397820416 24.097186333866446 46 23.35756863288479 28.55702329580326 25.886717458057447 22.198690613254513 47 23.21655850586061 26.31447265762227 27.048459745892895 23.420509090624222 48 24.508588275644442 24.799029967834514 27.39040930392652 23.301972452594523 49 23.185002593753985 24.295237015745887 28.259751425585456 24.26000896491467 50 22.01848652557657 28.37444455841675 27.235714339922048 22.371354576084634 51 21.9558398389351 29.338895073042508 25.271609740764145 23.43365534725825 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2646.0 1 3526.5 2 4407.0 3 18370.5 4 32334.0 5 22633.5 6 12933.0 7 13831.0 8 14729.0 9 16385.5 10 18042.0 11 18437.0 12 18832.0 13 19163.0 14 19494.0 15 19247.0 16 19000.0 17 18375.5 18 17751.0 19 17540.5 20 17330.0 21 17854.5 22 18379.0 23 18760.0 24 19141.0 25 19664.0 26 26225.0 27 32263.0 28 35179.0 29 38095.0 30 43332.0 31 48569.0 32 55777.5 33 62986.0 34 73698.0 35 84410.0 36 92520.5 37 100631.0 38 119335.0 39 138039.0 40 171217.5 41 204396.0 42 229224.5 43 254053.0 44 270367.5 45 286682.0 46 287534.5 47 288387.0 48 289746.0 49 291105.0 50 304295.5 51 317486.0 52 304238.5 53 290991.0 54 268565.0 55 246139.0 56 232631.5 57 219124.0 58 210117.5 59 201111.0 60 188352.5 61 175594.0 62 165162.5 63 154731.0 64 139917.5 65 125104.0 66 111433.5 67 97763.0 68 82486.5 69 67210.0 70 56304.0 71 45398.0 72 39537.5 73 33677.0 74 27501.5 75 15991.0 76 10656.0 77 8691.0 78 6726.0 79 5163.0 80 3600.0 81 2767.0 82 1934.0 83 1386.0 84 838.0 85 598.0 86 358.0 87 251.0 88 144.0 89 96.0 90 48.0 91 33.5 92 19.0 93 13.5 94 8.0 95 6.5 96 5.0 97 3.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4084813.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.058723124453376 #Duplication Level Percentage of deduplicated Percentage of total 1 81.24937514303596 15.485093448859665 2 7.01203048275953 2.6728069502228204 3 2.326867358285539 1.3304136218667704 4 1.162462066720805 0.8862017068924668 5 0.7516934577722396 0.716315874307205 6 0.5243801480107012 0.59964096317375 7 0.39726176981803385 0.5299911455224565 8 0.30821390506701607 0.4699330783823053 9 0.25175130408155627 0.43182525606394045 >10 3.287942183132824 15.038400982232917 >50 1.317586685873279 18.276006892415463 >100 1.4059881243608119 42.18251018366383 >500 0.003139320763537618 0.39882644200304757 >1k 0.0010464402545125391 0.31546129498103287 >5k 1.308050318140674E-4 0.1637137920136275 >10k+ 1.308050318140674E-4 0.5028583673986419 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20171 0.49380473475774783 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6567 0.16076623336245746 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.344277449175764E-5 0.0 0.0 0.028324430028987862 0.0 2 7.344277449175764E-5 0.0 0.0 0.10411737330448174 0.0 3 7.344277449175764E-5 0.0 0.0 0.16830635821027792 0.0 4 7.344277449175764E-5 0.0 0.0 0.3069418355258858 0.0 5 7.344277449175764E-5 0.0 0.0 0.5256788988871706 0.0 6 7.344277449175764E-5 0.0 0.0 1.011821104172945 0.0 7 7.344277449175764E-5 0.0 0.0 1.2547942831165098 0.0 8 7.344277449175764E-5 0.0 0.0 1.9288520674018614 0.0 9 7.344277449175764E-5 0.0 0.0 2.2820138890078936 0.0 10 7.344277449175764E-5 0.0 0.0 2.7777526168272573 0.0 11 7.344277449175764E-5 0.0 0.0 3.1156628222638343 0.0 12 7.344277449175764E-5 0.0 0.0 3.407597850868571 0.0 13 7.344277449175764E-5 0.0 0.0 3.5751453004091007 0.0 14 7.344277449175764E-5 0.0 0.0 3.6626401257536148 0.0 15 7.344277449175764E-5 0.0 0.0 3.737576236660038 0.0 16 9.792369932234351E-5 0.0 0.0 3.858487524398302 0.0 17 9.792369932234351E-5 0.0 0.0 3.983389202883951 0.0 18 9.792369932234351E-5 0.0 0.0 4.18310458765187 0.0 19 9.792369932234351E-5 0.0 0.0 4.276352430331572 0.0 20 1.4688554898351528E-4 0.0 0.0 4.381277674155463 0.0 21 1.7136647381410115E-4 0.0 0.0 4.501821748021268 0.0 22 2.692901731364447E-4 0.0 0.0 4.626943754830393 0.0 23 2.9377109796703056E-4 0.0 0.0 4.771528096879833 0.0 24 3.1825202279761643E-4 0.0 0.0 4.89466714877768 0.0 25 3.1825202279761643E-4 0.0 0.0 5.001918080460476 0.0 26 3.1825202279761643E-4 0.0 0.0 5.109805516188868 0.0 27 3.427329476282023E-4 0.0 0.0 5.216909562322682 0.0 28 3.427329476282023E-4 0.0 0.0 5.3227895622149655 0.0 29 3.427329476282023E-4 0.0 0.0 5.4411303528460175 0.0 30 3.427329476282023E-4 0.0 0.0 5.609510153830787 0.0 31 3.672138724587882E-4 0.0 0.0 5.732796091277618 0.0 32 3.672138724587882E-4 0.0 0.0 5.859852091148358 0.0 33 3.672138724587882E-4 0.0 0.0 5.98316250952002 0.0 34 3.672138724587882E-4 0.0 0.0 6.108039707080838 0.0 35 3.672138724587882E-4 0.0 0.0 6.25683476820114 0.0 36 3.9169479728937406E-4 0.0 0.0 6.3861430131562935 0.0 37 3.9169479728937406E-4 0.0 0.0 6.522477283537826 0.0 38 3.9169479728937406E-4 0.0 0.0 6.676437819797381 0.0 39 3.9169479728937406E-4 0.0 0.0 6.889862522470429 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTAG 85 0.0 39.705883 1 CGTTTTT 13045 0.0 39.687622 1 CGTAAGG 755 0.0 39.039734 2 TACGGGA 960 0.0 38.906246 4 GCGTAAG 480 0.0 38.906246 1 AGGGCGA 5895 0.0 38.816795 6 TGTTACG 245 0.0 37.65306 1 GGCGATA 2325 0.0 37.64516 8 GCGATAT 700 0.0 37.607143 9 GACCGAT 2940 0.0 37.19388 9 GGGCGAT 11455 0.0 36.92711 7 TAACGGG 1130 0.0 36.836285 3 CGCAATA 55 2.752131E-9 36.81818 18 CGTTCGA 105 0.0 36.428574 14 TAGGGAC 2320 0.0 36.077583 5 ATACGAG 225 0.0 36.0 1 CGTTAGG 460 0.0 35.70652 2 ATAGGGC 2430 0.0 35.555553 4 AACACGT 720 0.0 35.3125 41 TTAGGGA 3105 0.0 35.289856 4 >>END_MODULE