SRR1547673_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547673_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	4159451
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	51618	1.240981081397521	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	38665	42.951633	1
AGGGCGA	5675	37.823788	6
GGCGATA	2315	37.807777	8
GGGCGAT	11415	37.687252	7
GTTTTTT	45060	37.669773	2
CGTTCGG	1110	37.5	45
ACACGAC	2235	36.744965	26
ATAGGGC	2265	36.65563	4
CACGACC	2260	36.438053	27
CATACGA	595	36.302525	18
ACGACCA	2290	35.960697	28
TATAGCG	245	35.816326	1
GACACGA	2305	35.72668	25
CGTAAGG	755	35.463577	2
AACACGT	2150	35.372093	41
ATACTAT	2605	35.326294	45
TAAGGGA	3720	35.322582	4
GACCGAT	3030	35.272274	9
GCGAGAC	2355	35.063694	21
TAGGGCG	2405	34.89605	5