##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547671_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3608218 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.37495960609919 31.0 31.0 33.0 30.0 34.0 2 31.78648961897535 31.0 31.0 34.0 30.0 34.0 3 31.87312850831075 31.0 31.0 34.0 30.0 34.0 4 35.61260184390189 37.0 35.0 37.0 33.0 37.0 5 35.50852969526786 37.0 35.0 37.0 33.0 37.0 6 35.55417743606401 37.0 35.0 37.0 33.0 37.0 7 35.95717221076997 37.0 35.0 37.0 35.0 37.0 8 35.96468727776426 37.0 35.0 37.0 35.0 37.0 9 37.69522490049105 39.0 37.0 39.0 35.0 39.0 10 37.116199464666494 39.0 37.0 39.0 33.0 39.0 11 36.85275945078706 39.0 37.0 39.0 32.0 39.0 12 36.44613102645128 39.0 35.0 39.0 32.0 39.0 13 36.31546763527037 39.0 35.0 39.0 32.0 39.0 14 37.37717815276128 40.0 36.0 41.0 32.0 41.0 15 37.491251082944544 40.0 36.0 41.0 32.0 41.0 16 37.54244117179173 40.0 36.0 41.0 32.0 41.0 17 37.4553876733612 39.0 35.0 41.0 32.0 41.0 18 37.285604694616566 39.0 36.0 41.0 32.0 41.0 19 37.150377831938094 39.0 35.0 41.0 32.0 41.0 20 36.95786008495052 38.0 35.0 41.0 32.0 41.0 21 36.853840871033846 38.0 35.0 41.0 31.0 41.0 22 36.7648526225411 38.0 35.0 41.0 31.0 41.0 23 36.63411107643718 38.0 35.0 40.0 31.0 41.0 24 36.487209198557295 38.0 35.0 40.0 31.0 41.0 25 36.33260157784258 38.0 35.0 40.0 30.0 41.0 26 36.15223941568941 38.0 35.0 40.0 30.0 41.0 27 36.099728176069185 38.0 35.0 40.0 30.0 41.0 28 36.08262970807196 38.0 35.0 40.0 30.0 41.0 29 35.99800926662414 38.0 35.0 40.0 30.0 41.0 30 35.97559570957187 38.0 35.0 40.0 30.0 41.0 31 35.79819207154335 38.0 35.0 40.0 29.0 41.0 32 35.491465870410266 38.0 34.0 40.0 27.0 41.0 33 35.204036729488074 38.0 34.0 40.0 25.0 41.0 34 34.82786655351755 38.0 34.0 40.0 23.0 41.0 35 34.58612423085302 37.0 34.0 40.0 23.0 41.0 36 34.376120012704334 37.0 33.0 40.0 22.0 41.0 37 34.10684332265955 37.0 33.0 40.0 21.0 41.0 38 34.144328031177714 37.0 33.0 40.0 21.0 41.0 39 33.9893094042544 37.0 33.0 40.0 21.0 41.0 40 33.81422962803245 36.0 33.0 40.0 20.0 41.0 41 33.69253853287135 36.0 33.0 40.0 20.0 41.0 42 33.624169881088115 36.0 33.0 40.0 19.0 41.0 43 33.51076431634674 36.0 33.0 40.0 18.0 41.0 44 33.322061471895545 35.0 33.0 40.0 18.0 41.0 45 33.24905950804524 35.0 33.0 40.0 19.0 41.0 46 33.04529410362677 35.0 32.0 40.0 18.0 41.0 47 33.059738629983 35.0 32.0 40.0 18.0 41.0 48 32.86274498935486 35.0 32.0 39.0 18.0 41.0 49 32.81839595057727 35.0 32.0 39.0 18.0 41.0 50 32.670815344305694 35.0 32.0 39.0 18.0 41.0 51 31.98795111603567 35.0 31.0 38.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 6.0 12 8.0 13 18.0 14 49.0 15 172.0 16 461.0 17 1163.0 18 2478.0 19 4733.0 20 8031.0 21 12485.0 22 18757.0 23 26838.0 24 39129.0 25 57737.0 26 79845.0 27 92091.0 28 92539.0 29 93090.0 30 101435.0 31 116042.0 32 138681.0 33 174614.0 34 269273.0 35 361133.0 36 313912.0 37 383524.0 38 505150.0 39 714386.0 40 436.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.86844586441285 22.828498721529574 26.34716084227727 18.955894571780306 2 35.8131908881337 24.101232242619485 27.043543377922287 13.042033491324526 3 27.33928493234056 24.86875792981466 34.42538671443909 13.36657042340568 4 24.17913773502599 27.024226363262972 34.05839115042384 14.7382447512872 5 22.242392227964054 31.095986994133945 32.292311606449495 14.369309171452501 6 20.848130573041875 38.794025194708304 29.77530736779208 10.582536864457746 7 82.60928247683482 3.9036998318837717 11.604343196558522 1.8826744947228797 8 82.70340095858954 3.3040686566055597 11.442102445029652 2.5504279397752576 9 77.1245528956399 5.328835452846807 13.832645366771077 3.7139662847422192 10 42.98387735995996 25.072404161832797 18.98477309297831 12.95894538522894 11 33.23244327255171 23.197184870758917 26.779673511966294 16.790698344723072 12 28.119005004686525 20.49804086116748 32.148972151904346 19.233981982241648 13 23.285621877613824 24.51736563589007 33.42519770146926 18.771814785026848 14 20.703793396075294 25.808529307264692 34.29429707406814 19.19338022259187 15 19.904340591394423 21.416250348509987 39.143283471231506 19.53612558886409 16 23.354076721528465 19.90888577131426 35.89774786334972 20.83928964380755 17 23.316606701701506 21.19314852927401 31.59834023332293 23.891904535701556 18 25.096876075669485 21.444740866544095 32.61621110476141 20.84217195302501 19 26.916444627237045 24.072132005327838 28.509696476210696 20.501726891224422 20 28.166369105192647 23.204168927708913 28.064795419788936 20.564666547309503 21 26.293145258961626 24.001127426336215 29.414214994770273 20.29151231993189 22 25.820113973157945 21.697608071352672 29.0725227799429 23.409755175546486 23 24.1152835000546 24.51902850659245 28.694219695151457 22.671468298201493 24 23.723344875503642 22.762371896598268 32.70891614641909 20.805367081479 25 24.07227057788637 23.803273527264704 30.035241773085776 22.089214121763153 26 22.6001588595811 25.02795008505584 29.36873548106018 23.003155574302884 27 22.77805831022405 23.613678552681684 30.35925212944451 23.24901100764976 28 21.86001510995178 24.782676656454793 31.294367468927874 22.06294076466555 29 22.78628952020083 23.498524756541872 30.557272315586253 23.157913407671042 30 24.089315002585764 23.67628563462629 30.98720753568659 21.247191827101357 31 26.08836273196353 23.947638418742994 28.199709662775362 21.76428918651811 32 26.67527294636854 23.917235599401145 27.419684730800633 21.98780672342968 33 25.47501287339069 25.22148052030116 27.20442611837755 22.099080487930607 34 22.46868121604626 25.98864591884415 29.086740324448247 22.455932540661347 35 23.57116449172417 26.63927179566201 28.33196331263798 21.45760039997583 36 25.674446499629454 27.822376585893643 25.9919162312255 20.5112606832514 37 24.428180337219093 27.79718409475259 26.074477761598665 21.700157806429658 38 24.217633191786085 27.867800670580323 26.158785306209325 21.755780831424264 39 23.850360482653766 27.405993762017705 24.90866682667178 23.83497892865675 40 25.304624055420156 25.525979860418634 26.519683677649187 22.649712406512023 41 22.437058958189333 24.919724916842608 26.763432808106387 25.879783316861676 42 23.555117789446204 26.093877919793094 25.70798105879412 24.64302323196658 43 23.395121913365546 24.656076766980263 27.82833520591051 24.12046611374368 44 23.4531283863669 25.77327644837424 27.420488451640118 23.353106713618747 45 22.756662707186763 26.56812864411186 26.307944808212806 24.367263840488572 46 23.630224116170364 26.22926330947853 26.839897145904157 23.30061542844695 47 22.96984273123187 26.13849828364029 27.810209915254564 23.081449069873273 48 23.523412388054158 25.066473256327637 28.08408471993655 23.326029635681657 49 23.720046848610586 24.58773278111245 27.9403295477158 23.751890822561165 50 22.272601045723956 26.006604922429855 28.53436239162933 23.186431640216863 51 22.176320832056156 26.29383812175428 27.773238756638317 23.75660228955124 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2669.0 1 3674.5 2 4680.0 3 41331.0 4 77982.0 5 52803.5 6 27625.0 7 28432.0 8 29239.0 9 31083.5 10 32928.0 11 33618.0 12 34308.0 13 34566.0 14 34824.0 15 33710.5 16 32597.0 17 31208.5 18 29820.0 19 28052.0 20 26284.0 21 25429.5 22 24575.0 23 23376.5 24 22178.0 25 23006.5 26 24157.0 27 24479.0 28 27238.5 29 29998.0 30 33461.5 31 36925.0 32 41952.0 33 46979.0 34 56780.5 35 66582.0 36 74143.0 37 81704.0 38 87758.0 39 93812.0 40 110071.0 41 126330.0 42 151382.5 43 176435.0 44 193567.5 45 210700.0 46 221435.5 47 232171.0 48 227886.5 49 223602.0 50 216938.0 51 210274.0 52 205070.5 53 199867.0 54 203662.5 55 207458.0 56 207978.5 57 208499.0 58 206041.0 59 203583.0 60 195290.0 61 186997.0 62 176528.0 63 166059.0 64 149877.5 65 133696.0 66 119070.5 67 104445.0 68 91800.5 69 79156.0 70 67771.5 71 56387.0 72 48083.5 73 39780.0 74 33094.0 75 21222.0 76 16036.0 77 12231.0 78 8426.0 79 6353.5 80 4281.0 81 3024.0 82 1767.0 83 1446.5 84 1126.0 85 789.0 86 452.0 87 317.5 88 183.0 89 112.5 90 42.0 91 29.5 92 17.0 93 15.0 94 13.0 95 7.0 96 1.0 97 2.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3608218.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.282235034360824 #Duplication Level Percentage of deduplicated Percentage of total 1 79.01276705465207 20.766321144455674 2 6.169704602728272 3.2430725292296443 3 2.456624390651555 1.9369673887874281 4 1.5148094900969682 1.5925031620403516 5 1.0170991317953564 1.3365819217544948 6 0.757617124795055 1.1947122803952188 7 0.6213124244927493 1.1430635419200899 8 0.5117384292957732 1.075970373989292 9 0.4569867952400989 1.0809570924089644 >10 6.147210006858315 38.69732319660383 >50 1.2135551525635206 21.17434586742941 >100 0.1167184012876112 4.315829136616908 >500 0.002464191596738465 0.45202779128955306 >1k 0.0012856651809028637 0.511751889296444 >5k 0.0 0.0 >10k+ 1.0713876507523867E-4 1.4785726837827105 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 52509 1.4552612951878185 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.77145117063326E-5 0.0 0.0 0.03852317127180231 0.0 2 2.77145117063326E-5 0.0 0.0 0.11404521567155865 0.0 3 2.77145117063326E-5 0.0 0.0 0.20287022569035462 0.0 4 2.77145117063326E-5 0.0 0.0 0.3350130175061485 0.0 5 2.77145117063326E-5 0.0 0.0 0.578374144799455 0.0 6 2.77145117063326E-5 0.0 0.0 1.220574810058594 0.0 7 2.77145117063326E-5 0.0 0.0 1.6120700024222483 0.0 8 2.77145117063326E-5 0.0 0.0 2.4778159191046663 0.0 9 2.77145117063326E-5 0.0 0.0 3.0083825312106973 0.0 10 2.77145117063326E-5 0.0 0.0 3.67874114036347 0.0 11 2.77145117063326E-5 0.0 0.0 4.075668377021565 0.0 12 2.77145117063326E-5 0.0 0.0 4.409351097965811 0.0 13 2.77145117063326E-5 0.0 0.0 4.639409259640077 0.0 14 2.77145117063326E-5 0.0 0.0 4.790065345275702 0.0 15 2.77145117063326E-5 0.0 0.0 4.888701292438539 0.0 16 2.77145117063326E-5 0.0 0.0 5.013998599862869 0.0 17 2.77145117063326E-5 0.0 0.0 5.146446251307432 0.0 18 2.77145117063326E-5 0.0 0.0 5.352947078031316 0.0 19 2.77145117063326E-5 0.0 0.0 5.456433064742762 0.0 20 1.940015819443282E-4 0.0 0.0 5.572778584885946 0.0 21 1.940015819443282E-4 0.0 0.0 5.697881890728332 0.0 22 2.217160936506608E-4 0.0 0.0 5.838255892520906 0.0 23 2.217160936506608E-4 0.0 0.0 5.991239997139862 0.0 24 2.217160936506608E-4 0.0 0.0 6.121304200577681 0.0 25 2.217160936506608E-4 0.0 0.0 6.241363465289514 0.0 26 2.217160936506608E-4 0.0 0.0 6.3564064033825005 2.77145117063326E-5 27 2.217160936506608E-4 0.0 0.0 6.482507431646314 2.77145117063326E-5 28 2.217160936506608E-4 0.0 0.0 6.603924707431757 2.77145117063326E-5 29 2.217160936506608E-4 0.0 0.0 6.741333256471754 2.77145117063326E-5 30 2.217160936506608E-4 0.0 0.0 6.932147669569854 2.77145117063326E-5 31 2.217160936506608E-4 0.0 0.0 7.075293122533062 2.77145117063326E-5 32 2.217160936506608E-4 0.0 0.0 7.2401390381623285 2.77145117063326E-5 33 2.217160936506608E-4 0.0 0.0 7.386499374483471 2.77145117063326E-5 34 2.217160936506608E-4 0.0 0.0 7.542338073808179 2.77145117063326E-5 35 2.217160936506608E-4 0.0 0.0 7.71289317884895 2.77145117063326E-5 36 2.217160936506608E-4 0.0 0.0 7.868454733056595 2.77145117063326E-5 37 2.217160936506608E-4 0.0 0.0 8.022076271444796 2.77145117063326E-5 38 2.217160936506608E-4 0.0 0.0 8.219043306141701 2.77145117063326E-5 39 2.217160936506608E-4 0.0 0.0 8.532937865727625 2.77145117063326E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 30800 0.0 42.75 1 ATACTAT 2910 0.0 38.582474 45 ACGTATG 95 0.0 37.894737 1 CATATGC 1625 0.0 37.8 33 GTTTTTT 35715 0.0 37.761448 2 CGTTAGG 545 0.0 37.56881 2 TATACTA 3020 0.0 37.251656 44 CACGACC 1165 0.0 37.081547 27 ACGGGTA 275 0.0 36.818184 5 AGGGCGA 4750 0.0 36.710526 6 GGCGATA 2075 0.0 36.6506 8 GGGCGAT 9440 0.0 36.58633 7 ACACGAC 1190 0.0 36.30252 26 GTTAACG 125 0.0 36.0 1 GGACTAA 3585 0.0 35.962345 8 GACACGA 1195 0.0 35.96234 25 CCAGTAG 1745 0.0 35.845272 26 TATGGGA 2405 0.0 35.8316 4 ATTATAC 3190 0.0 35.83072 42 TAAGGGA 3150 0.0 35.642857 4 >>END_MODULE