##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547669_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3705880 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.444565123533412 31.0 31.0 33.0 30.0 34.0 2 31.85228960462832 31.0 31.0 34.0 30.0 34.0 3 31.807408496767298 31.0 31.0 34.0 30.0 34.0 4 35.60241265232549 37.0 35.0 37.0 33.0 37.0 5 35.52934174878841 37.0 35.0 37.0 33.0 37.0 6 35.59138962945373 37.0 35.0 37.0 33.0 37.0 7 36.055750590952755 37.0 35.0 37.0 35.0 37.0 8 36.090958422830745 37.0 35.0 37.0 35.0 37.0 9 37.826158429306936 39.0 38.0 39.0 35.0 39.0 10 37.24961952356795 39.0 37.0 39.0 34.0 39.0 11 36.97802897017712 39.0 37.0 39.0 33.0 39.0 12 36.659957958703465 39.0 35.0 39.0 32.0 39.0 13 36.521484775545886 39.0 35.0 39.0 32.0 39.0 14 37.70524005094607 40.0 36.0 41.0 33.0 41.0 15 37.8474929031701 40.0 36.0 41.0 33.0 41.0 16 37.887034928276144 40.0 36.0 41.0 33.0 41.0 17 37.824825952270444 40.0 36.0 41.0 33.0 41.0 18 37.517324090364504 39.0 36.0 41.0 33.0 41.0 19 37.25639955961877 38.0 36.0 41.0 33.0 41.0 20 36.93369591028312 38.0 35.0 41.0 32.0 41.0 21 36.825534016212075 38.0 35.0 40.0 32.0 41.0 22 36.74350302762097 38.0 35.0 40.0 32.0 41.0 23 36.66303792891297 38.0 35.0 40.0 32.0 41.0 24 36.4975433635196 38.0 35.0 40.0 32.0 41.0 25 36.35518365408486 37.0 35.0 40.0 31.0 41.0 26 36.18813021468585 37.0 35.0 40.0 31.0 41.0 27 36.06367610392134 37.0 35.0 40.0 31.0 41.0 28 36.04434520275886 37.0 35.0 40.0 31.0 41.0 29 35.842701868382136 36.0 35.0 40.0 30.0 41.0 30 35.72838219262361 36.0 35.0 40.0 30.0 41.0 31 35.44363848802444 36.0 35.0 40.0 29.0 41.0 32 34.943591265772234 36.0 34.0 40.0 25.0 41.0 33 34.42040918756139 36.0 34.0 40.0 23.0 41.0 34 33.82828046240029 36.0 33.0 40.0 19.0 41.0 35 33.42948422506935 35.0 33.0 40.0 16.0 41.0 36 33.14042170820426 35.0 33.0 40.0 15.0 41.0 37 32.8191973296491 35.0 33.0 40.0 15.0 41.0 38 32.84705764892549 35.0 33.0 40.0 15.0 41.0 39 32.69614558485434 35.0 32.0 40.0 12.0 41.0 40 32.57011910801213 35.0 32.0 40.0 11.0 41.0 41 32.47101282286528 35.0 32.0 40.0 10.0 41.0 42 32.40278719224584 35.0 32.0 40.0 10.0 41.0 43 32.31848926570747 35.0 32.0 40.0 10.0 41.0 44 32.160788260817945 35.0 31.0 40.0 10.0 41.0 45 32.11547972411411 35.0 31.0 40.0 10.0 41.0 46 31.928400541841615 35.0 31.0 40.0 10.0 41.0 47 31.936665515343183 35.0 31.0 40.0 10.0 41.0 48 31.744333599576887 35.0 31.0 39.0 10.0 41.0 49 31.71070649886127 35.0 31.0 39.0 10.0 41.0 50 31.580258939846946 35.0 31.0 39.0 10.0 41.0 51 31.053922954871716 35.0 29.0 38.0 9.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 2.0 12 2.0 13 12.0 14 46.0 15 129.0 16 341.0 17 990.0 18 2413.0 19 4766.0 20 8400.0 21 13714.0 22 21577.0 23 33144.0 24 52353.0 25 85119.0 26 120730.0 27 124004.0 28 106116.0 29 94376.0 30 97617.0 31 110367.0 32 133112.0 33 167307.0 34 257067.0 35 421513.0 36 373860.0 37 355980.0 38 421537.0 39 698828.0 40 455.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.90964089501009 21.903110732133797 25.92558312735437 25.261665245501742 2 41.39543104471812 22.698036633674054 25.0307889084374 10.875743413170422 3 23.31694496313966 22.539666691851867 42.41070946711712 11.73267887789135 4 20.684129005796194 24.993199995682534 41.75828683065831 12.564384167862963 5 18.95323108141656 28.745749997301584 40.04884130085162 12.252177620430235 6 17.383995164441373 35.94487679039796 37.10943149805174 9.56169654710892 7 75.24558269560806 3.4068831154813433 19.634121989918725 1.7134121989918722 8 75.52198128379764 2.983286021133982 19.25127095318791 2.243461741880471 9 70.29277796366856 5.45651775017 21.237546817490045 3.0131574686714084 10 34.39722818871631 26.882144052154956 27.55356352607208 11.167064233056657 11 26.971137759452546 24.18831694496314 34.79411098038793 14.046434315196391 12 24.622194998219047 22.32913639945168 37.81228749986508 15.236381102464192 13 18.434245037615895 30.23567951471715 37.72704458859974 13.60303085906721 14 15.125988968881884 33.76933413925977 36.890455168542964 14.21422172331538 15 13.729505542543203 27.200610921022804 45.56604639114056 13.503837145293426 16 15.37327166556931 25.837102118794995 43.84367545630188 14.945950759333815 17 15.462346325299253 26.709823307824323 36.58073116236899 21.247099204507432 18 17.329514177469317 28.500329206558227 38.82602782604941 15.344128789923042 19 19.7843427202176 31.42492471423791 33.35750213174739 15.433230433797101 20 21.43504376828176 29.337134499767934 33.17846233553164 16.049359396418662 21 17.839784342720215 31.60175181063607 34.86364911977722 15.694814726866493 22 17.541447645363583 29.71180934083133 34.064702580763544 18.682040433041543 23 15.675521063822897 33.39608945783458 32.90257644608028 18.025813032262242 24 16.236926182175353 31.08889116754995 38.48551491143804 14.18866773883666 25 15.687987738404912 32.35984435545674 36.290057961941564 15.66210994419679 26 14.839741168089631 35.33371291029391 34.00603905145337 15.820506870163092 27 15.14161278832558 33.73773570649886 35.144257234449036 15.976394270726521 28 14.176605826416397 32.38804278605891 38.90795168758837 14.527399699936316 29 14.598772761125561 30.50929873606269 37.751222381728496 17.14070612108325 30 15.667479788876056 32.438071389251675 37.07648385808499 14.817964963787277 31 19.238507453020606 32.40312692262027 33.1233607132449 15.235004911114231 32 19.324640841041806 33.22349887206278 32.36267769058901 15.089182596306411 33 18.528608589592753 33.86744848726888 31.327781795417014 16.276161127721352 34 15.568555916543438 33.448006951115524 32.48019363821818 18.503243494122852 35 17.3883396116442 33.225036968277436 31.349207205845847 18.037416214232515 36 21.152007080639414 32.947181236305546 28.828699256316987 17.072112426738048 37 17.97683681069004 34.93305233844593 31.253278573510208 15.836832277353826 38 18.05692575042905 35.83893704059495 29.141175645190888 16.96296156378512 39 17.65453819335758 36.09199434412339 28.687545198441395 17.565922264077628 40 19.533201290921454 33.414735501419365 29.32337258626831 17.72869062139087 41 16.805131304845272 32.742344598314034 29.517091756883655 20.935432339957043 42 18.093786091292756 35.07399052316858 27.594471488553324 19.23775189698533 43 18.107979751098256 34.56412512007944 29.27010588578152 18.05778924304079 44 18.199024253348732 36.43196757585243 28.283538592722916 17.085469578075923 45 16.605853400541843 37.560687340118946 26.676902652001683 19.15655660733753 46 18.84108497846665 36.14132135956912 27.344193551868923 17.673400110095308 47 18.2640560406705 35.26228588081643 28.17079883860244 18.302859239910628 48 18.973172363918962 33.407206925210744 28.765745248092223 18.85387546277807 49 17.48545554632098 32.822271633188336 29.477910779625894 20.21436204086479 50 16.869434520275885 35.268735091260375 29.555598130538495 18.30623225792524 51 16.204383304370353 35.996956188543614 28.20139885803102 19.597261649055014 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3973.0 1 4660.5 2 5348.0 3 95368.5 4 185389.0 5 113588.5 6 41788.0 7 47115.5 8 52443.0 9 65031.0 10 77619.0 11 89003.5 12 100388.0 13 104909.0 14 109430.0 15 107090.5 16 104751.0 17 96741.0 18 88731.0 19 81242.0 20 73753.0 21 67743.0 22 61733.0 23 57525.5 24 53318.0 25 51775.0 26 49796.0 27 49360.0 28 51756.5 29 54153.0 30 57065.0 31 59977.0 32 66716.5 33 73456.0 34 82428.5 35 91401.0 36 99199.5 37 106998.0 38 114872.5 39 122747.0 40 147469.0 41 172191.0 42 197304.5 43 222418.0 44 240693.5 45 258969.0 46 275082.5 47 291196.0 48 287752.5 49 284309.0 50 262272.5 51 240236.0 52 208017.5 53 175799.0 54 156788.0 55 137777.0 56 121406.0 57 105035.0 58 92779.5 59 80524.0 60 68365.0 61 56206.0 62 48145.0 63 40084.0 64 35601.5 65 31119.0 66 24601.5 67 18084.0 68 13593.5 69 9103.0 70 7408.0 71 5713.0 72 4866.0 73 4019.0 74 3193.0 75 2082.5 76 1798.0 77 1321.5 78 845.0 79 661.0 80 477.0 81 352.0 82 227.0 83 210.0 84 193.0 85 159.5 86 126.0 87 77.0 88 28.0 89 24.0 90 20.0 91 17.0 92 14.0 93 11.0 94 8.0 95 6.5 96 5.0 97 3.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3705880.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.274798170651625 #Duplication Level Percentage of deduplicated Percentage of total 1 75.97643160687551 23.001711326244724 2 7.927275720287826 4.799933449496418 3 3.865231151606136 3.510572789933734 4 2.4551682753880066 2.9731889604943484 5 1.6565912547085555 2.507648294378402 6 1.2151406533111557 2.2072882816769397 7 0.8690764410312437 1.8417779692962384 8 0.6830621809880719 1.6543655733935188 9 0.518421291281031 1.4125589964811625 >10 3.922542429424783 24.676491832058154 >50 0.648736038818705 13.835593485546886 >100 0.25706292515424345 10.895270988096495 >500 0.0031741567131999327 0.6483798757855294 >1k 0.0017231136442533096 1.1408081235748098 >5k 2.7207057540841733E-4 0.5537930169074348 >10k+ 9.069019180280576E-5 4.34061703663511 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 158092 4.265977311731627 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTT 7708 0.20799378285319545 No Hit CGTTCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTC 6335 0.17094455298066857 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCT 6127 0.16533185100434986 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3918 0.1057238766500804 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.09524323507507E-5 0.0 0.0 0.07134607704512828 0.0 2 8.09524323507507E-5 0.0 0.0 0.2500890476755858 0.0 3 8.09524323507507E-5 0.0 0.0 0.46358759592863236 0.0 4 8.09524323507507E-5 0.0 0.0 0.6424654872796745 0.0 5 8.09524323507507E-5 0.0 0.0 1.1038673675348365 0.0 6 8.09524323507507E-5 0.0 0.0 2.101174349951968 0.0 7 8.09524323507507E-5 0.0 0.0 2.787650976286334 0.0 8 8.09524323507507E-5 0.0 0.0 3.895404060574007 0.0 9 8.09524323507507E-5 0.0 0.0 4.633798180189321 0.0 10 8.09524323507507E-5 0.0 0.0 5.50177015985407 0.0 11 8.09524323507507E-5 0.0 0.0 6.031064146707394 0.0 12 8.09524323507507E-5 0.0 0.0 6.515483501894287 0.0 13 8.09524323507507E-5 0.0 0.0 6.855645622632141 0.0 14 8.09524323507507E-5 0.0 0.0 7.051685429641543 0.0 15 8.09524323507507E-5 0.0 0.0 7.1969680615670235 0.0 16 8.09524323507507E-5 0.0 0.0 7.390309454164733 0.0 17 8.09524323507507E-5 0.0 0.0 7.5801698921713605 0.0 18 8.09524323507507E-5 0.0 0.0 7.917552646065172 0.0 19 8.09524323507507E-5 0.0 0.0 8.05436225673794 0.0 20 8.09524323507507E-5 0.0 0.0 8.214378231351258 0.0 21 8.09524323507507E-5 0.0 0.0 8.362818008138419 2.6984144116916898E-5 22 8.09524323507507E-5 0.0 0.0 8.524210174101698 2.6984144116916898E-5 23 8.09524323507507E-5 0.0 0.0 8.701118222932205 2.6984144116916898E-5 24 8.09524323507507E-5 0.0 0.0 8.862834198624888 2.6984144116916898E-5 25 8.09524323507507E-5 0.0 0.0 8.995299362094833 2.6984144116916898E-5 26 8.09524323507507E-5 0.0 0.0 9.11977721890617 2.6984144116916898E-5 27 8.09524323507507E-5 0.0 0.0 9.263386833896403 2.6984144116916898E-5 28 8.09524323507507E-5 0.0 0.0 9.397632950878064 2.6984144116916898E-5 29 8.09524323507507E-5 0.0 0.0 9.551469556488607 2.6984144116916898E-5 30 8.09524323507507E-5 0.0 0.0 9.78758081751163 2.6984144116916898E-5 31 8.09524323507507E-5 0.0 0.0 9.938638056278132 2.6984144116916898E-5 32 8.09524323507507E-5 0.0 0.0 10.08122227379192 2.6984144116916898E-5 33 8.09524323507507E-5 0.0 0.0 10.22974300301143 2.6984144116916898E-5 34 8.09524323507507E-5 0.0 0.0 10.380260558895593 2.6984144116916898E-5 35 8.09524323507507E-5 0.0 0.0 10.54254320161473 2.6984144116916898E-5 36 8.09524323507507E-5 0.0 0.0 10.692062344166567 2.6984144116916898E-5 37 8.09524323507507E-5 0.0 0.0 10.844064027977161 2.6984144116916898E-5 38 8.09524323507507E-5 0.0 0.0 11.001678413764072 2.6984144116916898E-5 39 1.0793657646766759E-4 0.0 0.0 11.188948373935476 2.6984144116916898E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 62425 0.0 44.39808 1 CGACGGT 165 0.0 43.636364 28 TATAGCG 200 0.0 42.75 1 CACGACG 170 0.0 42.352943 26 AATTACG 65 0.0 41.53846 1 CGTTCGG 1095 0.0 41.30137 45 GTTTTTT 67845 0.0 40.91753 2 CGTTCTG 875 0.0 40.37143 1 CGGTCTA 180 0.0 40.0 31 AGGGCGA 4180 0.0 39.401917 6 ATAACGC 240 0.0 39.374996 11 ATACTAT 3035 0.0 39.217464 45 TGTACGG 375 0.0 39.0 2 ACGCCGA 185 0.0 38.91892 12 ACTACGG 220 0.0 38.863636 2 GCGCGAC 795 0.0 38.773586 9 ACTCGCG 35 6.252054E-6 38.571426 1 ACGGGAT 1310 0.0 38.47328 5 CTTTGCG 135 0.0 38.333336 1 GGCGCGA 800 0.0 38.25 8 >>END_MODULE