##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547668_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4214442 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.399682330424763 31.0 31.0 33.0 30.0 34.0 2 31.80585686076591 31.0 31.0 34.0 30.0 34.0 3 31.953509622388918 31.0 31.0 34.0 30.0 34.0 4 35.65460979175891 37.0 35.0 37.0 33.0 37.0 5 35.54023996533824 37.0 35.0 37.0 33.0 37.0 6 35.59123485386677 37.0 35.0 37.0 33.0 37.0 7 35.977093290167474 37.0 35.0 37.0 35.0 37.0 8 35.984850663504204 37.0 35.0 37.0 35.0 37.0 9 37.72244771668468 39.0 37.0 39.0 35.0 39.0 10 37.12123882592286 39.0 37.0 39.0 33.0 39.0 11 36.850606557167 39.0 37.0 39.0 32.0 39.0 12 36.2670092505722 38.0 35.0 39.0 32.0 39.0 13 36.046455022989996 38.0 35.0 39.0 32.0 39.0 14 37.082991295170274 39.0 35.0 41.0 32.0 41.0 15 37.260591556367366 39.0 35.0 41.0 32.0 41.0 16 37.326944587207514 39.0 35.0 41.0 32.0 41.0 17 37.24233196233333 39.0 35.0 41.0 32.0 41.0 18 37.15558619622716 39.0 35.0 41.0 32.0 41.0 19 37.126873261039066 39.0 35.0 41.0 32.0 41.0 20 37.02737562884956 39.0 35.0 41.0 32.0 41.0 21 36.88487016786564 38.0 35.0 41.0 31.0 41.0 22 36.78828869871741 38.0 35.0 41.0 31.0 41.0 23 36.69084448190294 38.0 35.0 40.0 31.0 41.0 24 36.573364635223356 38.0 35.0 40.0 31.0 41.0 25 36.43146589750197 38.0 35.0 40.0 31.0 41.0 26 36.25891897432685 38.0 35.0 40.0 30.0 41.0 27 36.240561858485655 38.0 35.0 40.0 30.0 41.0 28 36.27288476149393 38.0 35.0 40.0 30.0 41.0 29 36.24550842080636 38.0 35.0 40.0 30.0 41.0 30 36.264938513805625 38.0 35.0 40.0 30.0 41.0 31 36.12901446976848 38.0 35.0 40.0 30.0 41.0 32 35.91407996598363 38.0 35.0 40.0 30.0 41.0 33 35.80629060739239 38.0 35.0 40.0 29.0 41.0 34 35.61674095882682 38.0 34.0 40.0 29.0 41.0 35 35.509930377497184 38.0 34.0 40.0 28.0 41.0 36 35.35496442945472 38.0 34.0 40.0 27.0 41.0 37 35.08196743483479 37.0 34.0 40.0 26.0 41.0 38 35.15748846466507 37.0 34.0 40.0 27.0 41.0 39 35.041141389536264 37.0 34.0 40.0 26.0 41.0 40 34.88992777691566 37.0 34.0 40.0 26.0 41.0 41 34.82750005813344 37.0 34.0 40.0 25.0 41.0 42 34.790452686263095 37.0 34.0 40.0 26.0 41.0 43 34.688106041084446 36.0 34.0 40.0 25.0 41.0 44 34.52783334068899 36.0 34.0 40.0 24.0 41.0 45 34.449653121338486 36.0 33.0 40.0 24.0 41.0 46 34.26871789907181 36.0 33.0 40.0 24.0 41.0 47 34.275187082892586 35.0 33.0 40.0 24.0 41.0 48 34.10579241569821 35.0 33.0 40.0 23.0 41.0 49 34.07057731486161 35.0 33.0 40.0 24.0 41.0 50 33.89911119906265 35.0 33.0 39.0 24.0 41.0 51 33.174821482891446 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 0.0 11 6.0 12 10.0 13 23.0 14 43.0 15 133.0 16 339.0 17 977.0 18 2082.0 19 4085.0 20 6808.0 21 10690.0 22 16159.0 23 23641.0 24 33668.0 25 46363.0 26 60679.0 27 72228.0 28 81614.0 29 93632.0 30 110436.0 31 133388.0 32 164189.0 33 211262.0 34 347991.0 35 518168.0 36 338829.0 37 419022.0 38 592023.0 39 925470.0 40 482.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.61461802060629 24.506020014037446 27.664445257521635 13.21491670783463 2 31.564961624812966 25.70995163772571 28.608983110931412 14.116103626529918 3 29.426173144629825 26.15387754772755 30.48766598282762 13.932283324815007 4 25.750621315941707 28.96990870914821 29.492896093955025 15.78657388095506 5 23.781179097968366 32.4690908072765 28.641964938656173 15.107765156098957 6 21.973229196178284 40.882992339199355 26.403969968028985 10.739808496593382 7 88.02095271449933 4.274563512797187 6.123491555940264 1.5809922167632156 8 88.37834285060751 3.467932409557422 5.8490305478162945 2.3046941920187773 9 82.67773052755264 5.522747732677304 8.385617835053846 3.4139039047162116 10 47.03006946115286 25.69998590560743 14.145075433473755 13.124869199765948 11 38.58911808490898 24.23023024163104 21.674209776762854 15.506441896697117 12 32.94504942765851 23.020770009410498 26.52960937652007 17.504571186410917 13 23.005275668759946 32.14952299735054 27.781400242309655 17.063801091579858 14 20.238788432727276 33.069360071867166 28.81076545839283 17.88108603701273 15 19.413768180935932 23.3912342369405 39.67735230429082 17.517645277832745 16 21.743376703250394 21.428696847649107 37.57183038703582 19.25609606206468 17 21.92826476197798 21.815604533174263 28.093303929677997 28.162826775169762 18 24.881324740024898 22.86850785940345 31.23533317103427 21.014834229537385 19 29.276544795254033 24.350815600262145 25.238145405726307 21.134494198757512 20 31.333756639669026 24.05125043837357 24.257659732889906 20.357333189067496 21 27.039095567099984 26.31750537793615 26.92097791356483 19.72242114139903 22 26.735923759301944 23.617029253220238 25.581275053731904 24.065771933745914 23 24.192289275780755 28.44848736795998 24.809120638034642 22.55010271822462 24 23.24068049815373 24.439819079251773 32.536454410809306 19.783046011785192 25 22.478278263172207 25.04103746118703 30.967943087127548 21.512741188513214 26 21.36852280800163 29.67211317654864 26.534497330844747 22.424866684604986 27 21.957307752722663 28.561811978904917 27.686963066522214 21.79391720185021 28 20.438553905831427 27.685563118438928 31.945889871067155 19.92999310466249 29 21.56584430394344 25.076344626406062 31.36479277683736 21.99301829281314 30 23.271526811853146 26.728164725009858 29.357077401943126 20.643231061193866 31 28.321258187916694 25.90238517934284 24.557746909318006 21.21860972342246 32 29.10435118101044 25.651130090294277 25.51785028717918 19.7266684415161 33 27.048064726006434 26.158836685853075 24.840322870738284 21.952775717402208 34 23.067656406233613 27.048990115417414 27.67388897510038 22.20946450324859 35 22.819889323426445 27.208346917575327 28.054176567146964 21.917587191851258 36 28.24010865495361 26.450452989980644 24.817116951662875 20.492321403402872 37 23.51072811062532 29.039716289843355 26.495891982853248 20.95366361667808 38 24.06650749968798 30.187531350532286 23.783338339927326 21.96262280985241 39 23.129989687840048 28.795721948480963 25.39344473123607 22.68084363244292 40 25.33488419107441 25.6154195502038 25.011970742508737 24.037725516213058 41 20.62811636748115 25.412213526725484 26.83233035357943 27.127339752213935 42 23.712201994949748 26.195282791885617 25.350259892056886 24.742255321107752 43 23.76986087363404 25.703948470521127 26.203611296584462 24.32257935926037 44 22.942633924016512 27.544642920699825 26.926411610362656 22.58631154492101 45 21.63209269459634 29.83120897143679 24.983188759033816 23.553509574933052 46 24.00215734372427 28.35696872800717 25.908506986215496 21.732366942053062 47 23.663749554508044 26.590708805578533 26.8124226172765 22.933119022636923 48 24.377034966906653 24.689958955420433 28.426871220436773 22.506134857236145 49 23.962863885657935 24.00234716719319 28.680831293917443 23.353957653231436 50 22.099888905814815 29.095643029373758 26.5868411523993 22.21762691241213 51 21.94214560314272 29.167965771032083 25.13720677612837 23.752681849696827 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2383.0 1 3446.0 2 4509.0 3 17403.5 4 30298.0 5 22016.0 6 13734.0 7 14484.0 8 15234.0 9 16554.0 10 17874.0 11 18352.5 12 18831.0 13 19272.5 14 19714.0 15 19264.5 16 18815.0 17 18671.0 18 18527.0 19 18518.0 20 18509.0 21 19539.0 22 20569.0 23 20836.0 24 21103.0 25 23591.5 26 30167.5 27 34255.0 28 37657.0 29 41059.0 30 47044.0 31 53029.0 32 63445.5 33 73862.0 34 81866.5 35 89871.0 36 97147.5 37 104424.0 38 130173.5 39 155923.0 40 190887.0 41 225851.0 42 253727.0 43 281603.0 44 294178.5 45 306754.0 46 304700.5 47 302647.0 48 306615.5 49 310584.0 50 313286.5 51 315989.0 52 306297.5 53 296606.0 54 278094.5 55 259583.0 56 241473.0 57 223363.0 58 207784.0 59 192205.0 60 183283.5 61 174362.0 62 161090.5 63 147819.0 64 129453.5 65 111088.0 66 96125.5 67 81163.0 68 70553.0 69 59943.0 70 51056.5 71 42170.0 72 36594.0 73 31018.0 74 28219.5 75 19862.5 76 14304.0 77 10641.0 78 6978.0 79 5377.5 80 3777.0 81 2432.5 82 1088.0 83 895.5 84 703.0 85 597.5 86 492.0 87 334.5 88 177.0 89 120.5 90 64.0 91 52.0 92 40.0 93 35.5 94 31.0 95 23.0 96 15.0 97 8.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4214442.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.894361963047633 #Duplication Level Percentage of deduplicated Percentage of total 1 81.42703504300627 14.57084838637318 2 7.366695043897202 2.6364461517377125 3 2.270407373818405 1.2188247405203683 4 1.0816024092116454 0.774183400421502 5 0.6535223781268166 0.584718299257647 6 0.46570115141601537 0.500005498202774 7 0.3641788063487948 0.4561723166053175 8 0.2914237631770352 0.4171873842338673 9 0.23469843317532224 0.3779800843859427 >10 2.878266303405865 12.55729596970866 >50 1.3533326177376326 17.707974232517138 >100 1.6063979250685863 46.70015905575833 >500 0.00498667619175061 0.5844304621642188 >1k 0.0014825253543042354 0.3450920432099949 >5k 1.3477503220947593E-4 0.1617053707263272 >10k+ 1.3477503220947593E-4 0.40697660417699805 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16875 0.4004088797520526 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6705 0.15909579488814887 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.372793361493645E-5 0.0 0.0 0.02954127735059588 0.0 2 2.372793361493645E-5 0.0 0.0 0.10143691620385333 0.0 3 2.372793361493645E-5 0.0 0.0 0.16009236809997623 0.0 4 2.372793361493645E-5 0.0 0.0 0.283026792158962 0.0 5 2.372793361493645E-5 0.0 0.0 0.4751518706391024 0.0 6 2.372793361493645E-5 0.0 0.0 0.9145932011877255 0.0 7 2.372793361493645E-5 0.0 0.0 1.121239775040207 0.0 8 2.372793361493645E-5 0.0 0.0 1.6963811579326515 0.0 9 2.372793361493645E-5 0.0 0.0 1.9872856240517724 0.0 10 2.372793361493645E-5 0.0 0.0 2.4017414405038675 0.0 11 2.372793361493645E-5 0.0 0.0 2.699811742574699 0.0 12 2.372793361493645E-5 0.0 0.0 2.9603681816003165 0.0 13 2.372793361493645E-5 0.0 0.0 3.1012883793394237 0.0 14 2.372793361493645E-5 0.0 0.0 3.1727331874539977 0.0 15 2.372793361493645E-5 0.0 0.0 3.238910394306055 0.0 16 2.372793361493645E-5 0.0 0.0 3.355106085218399 0.0 17 2.372793361493645E-5 0.0 0.0 3.482074257991924 0.0 18 2.372793361493645E-5 0.0 0.0 3.6733925867291566 0.0 19 2.372793361493645E-5 0.0 0.0 3.755301413567917 0.0 20 9.49117344597458E-5 0.0 0.0 3.8437591500844004 0.0 21 9.49117344597458E-5 0.0 0.0 3.955399077742676 0.0 22 9.49117344597458E-5 0.0 0.0 4.074560760356887 0.0 23 9.49117344597458E-5 0.0 0.0 4.209762526094795 0.0 24 9.49117344597458E-5 0.0 0.0 4.318104270980595 0.0 25 9.49117344597458E-5 0.0 0.0 4.413514292046254 0.0 26 9.49117344597458E-5 0.0 0.0 4.506432880082345 0.0 27 9.49117344597458E-5 0.0 0.0 4.602317459820304 0.0 28 1.6609553530455516E-4 0.0 0.0 4.696873275275825 0.0 29 1.6609553530455516E-4 0.0 0.0 4.799235580890661 0.0 30 1.898234689194916E-4 0.0 0.0 4.950999444291795 0.0 31 2.1355140253442805E-4 0.0 0.0 5.06691040000076 0.0 32 2.372793361493645E-4 0.0 0.0 5.192004066018704 0.0 33 2.372793361493645E-4 0.0 0.0 5.307416735121755 0.0 34 2.372793361493645E-4 0.0 0.0 5.4241818964408575 0.0 35 2.372793361493645E-4 0.0 0.0 5.554282156451554 0.0 36 2.372793361493645E-4 0.0 0.0 5.672613361389242 0.0 37 2.372793361493645E-4 0.0 0.0 5.798181586079486 0.0 38 2.372793361493645E-4 0.0 0.0 5.935447682041893 0.0 39 2.372793361493645E-4 0.0 0.0 6.111390309796647 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGTA 25 3.8925824E-5 45.000004 39 CGTTTTT 12445 0.0 39.75693 1 TACGGGA 1115 0.0 39.55157 4 CCGCGTA 40 3.4611548E-7 39.375 28 GGCGATA 2185 0.0 38.82151 8 CATACGA 360 0.0 38.75 18 TCTAGCG 250 0.0 38.699997 1 GACCGAT 3080 0.0 37.913963 9 TAACGGG 1140 0.0 37.69737 3 GGTACGA 90 0.0 37.5 9 GCGATAT 535 0.0 37.429905 9 ACGGGAT 1025 0.0 37.317074 5 GCGTAAG 350 0.0 37.285717 1 GGGCGAT 11380 0.0 37.190247 7 AGGGCGA 5900 0.0 37.14407 6 TGGGCGA 3370 0.0 36.988132 6 ACGGGTA 415 0.0 36.86747 5 CGTAAGG 740 0.0 36.79054 2 TACGGGT 350 0.0 36.64286 4 CTACGGG 870 0.0 36.46552 3 >>END_MODULE