##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547667_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 859626 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.43033249343319 31.0 31.0 33.0 30.0 34.0 2 31.84757441026679 31.0 31.0 34.0 30.0 34.0 3 31.98985605367916 33.0 31.0 34.0 30.0 34.0 4 35.698272271894986 37.0 35.0 37.0 33.0 37.0 5 35.587799810615316 37.0 35.0 37.0 33.0 37.0 6 35.6319841419408 37.0 35.0 37.0 33.0 37.0 7 35.985185417844505 37.0 35.0 37.0 35.0 37.0 8 35.98347071866137 37.0 35.0 37.0 35.0 37.0 9 37.733957558286974 39.0 37.0 39.0 35.0 39.0 10 37.155382689681325 39.0 37.0 39.0 33.0 39.0 11 36.89316051399097 39.0 37.0 39.0 32.0 39.0 12 36.38098545181276 38.0 35.0 39.0 32.0 39.0 13 36.20376768501651 39.0 35.0 39.0 32.0 39.0 14 37.23291873442637 39.0 35.0 41.0 32.0 41.0 15 37.38671701414336 39.0 35.0 41.0 32.0 41.0 16 37.45065412167617 39.0 35.0 41.0 32.0 41.0 17 37.36618250262323 39.0 35.0 41.0 32.0 41.0 18 37.254148897311154 39.0 35.0 41.0 32.0 41.0 19 37.18274109903609 39.0 35.0 41.0 32.0 41.0 20 37.07043528232045 39.0 35.0 41.0 32.0 41.0 21 36.94130587022728 39.0 35.0 41.0 31.0 41.0 22 36.864922652409305 38.0 35.0 41.0 31.0 41.0 23 36.75753176381357 38.0 35.0 41.0 31.0 41.0 24 36.627247198200145 38.0 35.0 41.0 31.0 41.0 25 36.47036269261283 38.0 35.0 40.0 31.0 41.0 26 36.30383445824114 38.0 35.0 40.0 30.0 41.0 27 36.2697952365331 38.0 35.0 40.0 30.0 41.0 28 36.273613175962566 38.0 35.0 40.0 30.0 41.0 29 36.24206457226747 38.0 35.0 40.0 30.0 41.0 30 36.24266832320102 38.0 35.0 40.0 30.0 41.0 31 36.11632151656651 38.0 35.0 40.0 30.0 41.0 32 35.907203830503036 38.0 35.0 40.0 30.0 41.0 33 35.75528776467906 38.0 35.0 40.0 29.0 41.0 34 35.487686505526824 38.0 34.0 40.0 27.0 41.0 35 35.33617410362181 38.0 34.0 40.0 27.0 41.0 36 35.16761126350296 38.0 34.0 40.0 26.0 41.0 37 34.92574445165688 37.0 34.0 40.0 25.0 41.0 38 34.976379262609555 37.0 34.0 40.0 26.0 41.0 39 34.839736117800065 37.0 34.0 40.0 25.0 41.0 40 34.67791690805071 37.0 34.0 40.0 24.0 41.0 41 34.60021567518898 37.0 34.0 40.0 24.0 41.0 42 34.55163291943241 36.0 33.0 40.0 24.0 41.0 43 34.45127764865185 36.0 33.0 40.0 24.0 41.0 44 34.27267788549904 36.0 33.0 40.0 23.0 41.0 45 34.191814812488225 36.0 33.0 40.0 23.0 41.0 46 34.00867935590594 35.0 33.0 40.0 23.0 41.0 47 34.0025383131734 35.0 33.0 40.0 23.0 41.0 48 33.81845825975483 35.0 33.0 40.0 23.0 41.0 49 33.78018812832558 35.0 33.0 39.0 23.0 41.0 50 33.63389194835894 35.0 33.0 39.0 23.0 41.0 51 32.923363183523996 35.0 32.0 39.0 21.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 2.0 13 3.0 14 9.0 15 30.0 16 92.0 17 232.0 18 428.0 19 872.0 20 1450.0 21 2358.0 22 3465.0 23 5110.0 24 7294.0 25 10315.0 26 13446.0 27 15992.0 28 17861.0 29 19778.0 30 22725.0 31 26866.0 32 32835.0 33 42032.0 34 69228.0 35 95452.0 36 72062.0 37 90855.0 38 124423.0 39 184306.0 40 103.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.683718268177095 24.27986124198198 27.196827457522225 14.839593032318707 2 32.6821198986536 25.275177809884763 28.043125731422734 13.999576560038902 3 29.443734833520622 25.80250015704504 30.542352139186114 14.211412870248225 4 25.800638882490755 28.450977518129978 30.472554343400503 15.275829255978762 5 23.763241223508828 31.939355021835077 29.1683825291464 15.129021225509698 6 22.267474459823227 40.628831608164475 26.411718584593764 10.691975347418529 7 87.03738602601597 4.0291940913839275 7.14857391470244 1.7848459678976671 8 87.47676315048636 3.280961720562198 7.176958351655255 2.065316777296173 9 81.90271117904763 5.209358488458935 9.418747222629376 3.4691831098640575 10 46.55152356955234 24.013582651059878 16.004518243980524 13.430375535407258 11 37.44628477966 24.263575089632003 21.874978188188816 16.415161942519187 12 31.23497893269864 21.906968844590555 27.740784946011406 19.1172672766994 13 24.5680098089169 27.53965096448921 29.329615437411157 18.562723789182737 14 21.54157738365289 28.949682769018153 30.81212061989749 18.696619227431466 15 20.72261657976841 22.021553559338596 37.8507630062376 19.4050668546554 16 24.58964712561044 20.55126299111474 34.579223988106456 20.279865895168363 17 24.37943943063611 21.26343316744724 28.393045347627922 25.964082054288724 18 26.968007017005068 21.474106181060133 30.329934180678574 21.22795262125622 19 29.809242624117932 23.32328245074021 25.867761096104587 20.99971382903728 20 31.236840207252918 23.30176146370631 24.669798261104248 20.79160006793652 21 27.873051769025135 24.405031955757504 27.34793968539807 20.373976589819293 22 27.652839723321538 21.954780334703695 26.394501794966647 23.997878147008116 23 25.357306549592494 25.328456794001113 26.055633496427514 23.258603159978875 24 24.964926607617734 23.085969945069134 30.800254994613933 21.148848452699198 25 24.762978318478034 23.588165085746592 29.10858908409006 22.540267511685315 26 23.389241367757606 26.410206299018412 26.523395057850742 23.677157275373244 27 23.464506657546423 25.188046894812395 28.626053655892214 22.721392791748972 28 22.323080037132428 25.271106271797272 30.626574812767416 21.77923887830289 29 23.855606973265118 24.1523639350136 29.713968632870575 22.27806045885071 30 24.74192265008271 24.524386186550895 29.183970703538513 21.549720459827878 31 28.450046880852835 23.988804433555988 25.606833669526054 21.954315016065127 32 29.449434986843116 23.8590968630544 25.477358758343744 21.214109391758743 33 28.390602424775423 24.608376200812913 24.877563033226078 22.123458341185586 34 24.522292252677328 26.029575652667557 27.306526326565272 22.141605768089846 35 25.23853396709732 26.171381507771983 27.25254936449107 21.337535160639625 36 28.19830949738607 26.711383787833316 24.568242468236186 20.522064246544428 37 25.296349807939734 28.15049800727293 25.08451349773041 21.46863868705693 38 26.36623368767348 27.9228408633522 23.812913988176255 21.898011460798067 39 25.268430689625486 27.180890294151176 24.48983627763702 23.060842738586317 40 27.317344984912044 24.65165083419999 24.739130738251287 23.291873442636682 41 22.6628789729487 24.074655722372288 26.203139504854438 27.059325799824574 42 25.32229132204005 25.084862486709337 24.642344461428575 24.95050172982204 43 24.873491495138584 24.309176316211932 26.295970573249296 24.521361615400185 44 24.179003427071773 25.53785018135794 27.12377243126662 23.159373960303668 45 23.213001933398942 27.156112076647286 25.48619981247659 24.144686177477183 46 24.78868717325907 26.022828532408283 26.019222312959357 23.169261981373296 47 24.082798798547277 25.63556709545779 27.24487160695465 23.036762499040282 48 24.887567383955346 24.913159909076736 27.495329364165343 22.703943342802567 49 24.86639538590038 24.124328487039712 27.684597720403993 23.32467840665592 50 23.354458799524444 27.05769718458958 26.73011286303579 22.857731152850196 51 23.37074495187442 27.434954270810795 25.417914302266336 23.77638647504845 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 524.0 1 790.5 2 1057.0 3 5209.5 4 9362.0 5 6555.5 6 3749.0 7 3836.0 8 3923.0 9 4109.0 10 4295.0 11 4449.0 12 4603.0 13 4611.0 14 4619.0 15 4432.0 16 4245.0 17 4106.0 18 3967.0 19 3845.0 20 3723.0 21 3721.0 22 3719.0 23 3957.0 24 4195.0 25 4304.0 26 5041.0 27 5669.0 28 6394.0 29 7119.0 30 8896.0 31 10673.0 32 12116.0 33 13559.0 34 15058.0 35 16557.0 36 18386.0 37 20215.0 38 22208.0 39 24201.0 40 29504.5 41 34808.0 42 40582.0 43 46356.0 44 47777.0 45 49198.0 46 50112.0 47 51026.0 48 52503.0 49 53980.0 50 56461.0 51 58942.0 52 58254.5 53 57567.0 54 56127.5 55 54688.0 56 53049.0 57 51410.0 58 50311.0 59 49212.0 60 47218.5 61 45225.0 62 42270.0 63 39315.0 64 36468.5 65 33622.0 66 29612.5 67 25603.0 68 21898.5 69 18194.0 70 15430.5 71 12667.0 72 10819.5 73 8972.0 74 7678.5 75 5260.0 76 4135.0 77 2996.0 78 1857.0 79 1549.5 80 1242.0 81 862.5 82 483.0 83 353.5 84 224.0 85 144.0 86 64.0 87 46.5 88 29.0 89 24.0 90 19.0 91 16.0 92 13.0 93 7.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 859626.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.319468904445717 #Duplication Level Percentage of deduplicated Percentage of total 1 72.03933771742741 21.121551221029762 2 5.895596138017421 3.4571149528354406 3 3.095774376435581 2.722993816952485 4 2.130228644269328 2.4982868998005645 5 1.741567972637837 2.553092400936681 6 1.479582976512637 2.60283522428457 7 1.2869044735016237 2.6411948985676057 8 1.1117169516631797 2.607596047586702 9 1.0586000358988006 2.7933831751302 >10 10.075650006314023 54.243348260999134 >50 0.06867137021387458 1.2872935268035626 >100 0.015570832859070379 0.7329039103774545 >500 3.992521245915459E-4 0.09680746428400457 >1k 0.0 0.0 >5k 3.992521245915459E-4 0.6415982004118852 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5481 0.637602864501539 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.019543382819970544 0.0 2 0.0 0.0 0.0 0.0754979491081005 0.0 3 0.0 0.0 0.0 0.12424007649838419 0.0 4 0.0 0.0 0.0 0.19869105866970055 0.0 5 0.0 0.0 0.0 0.3183942784420201 0.0 6 0.0 0.0 0.0 0.6563319397040108 0.0 7 0.0 0.0 0.0 0.8212873970773337 0.0 8 0.0 0.0 0.0 1.2144816466695982 0.0 9 0.0 0.0 0.0 1.441208153313185 0.0 10 0.0 0.0 0.0 1.7793784738944611 0.0 11 0.0 0.0 0.0 2.0259973523369466 0.0 12 0.0 0.0 0.0 2.233762124458776 0.0 13 0.0 0.0 0.0 2.3597471458518005 0.0 14 0.0 0.0 0.0 2.4376880178123974 0.0 15 0.0 0.0 0.0 2.4963181662723093 0.0 16 0.0 0.0 0.0 2.593337102414306 0.0 17 0.0 0.0 0.0 2.690821357194873 0.0 18 0.0 0.0 0.0 2.830998597064305 0.0 19 0.0 0.0 0.0 2.8980044810184893 0.0 20 1.1632965964268182E-4 0.0 0.0 2.976759660596585 0.0 21 1.1632965964268182E-4 0.0 0.0 3.0585394113253903 0.0 22 2.3265931928536363E-4 0.0 0.0 3.1539297322323896 0.0 23 2.3265931928536363E-4 0.0 0.0 3.25502020646188 0.0 24 2.3265931928536363E-4 0.0 0.0 3.3398245283413948 0.0 25 2.3265931928536363E-4 0.0 0.0 3.4186960375791333 0.0 26 2.3265931928536363E-4 0.0 0.0 3.4917510638347373 0.0 27 2.3265931928536363E-4 0.0 0.0 3.58469846188924 0.0 28 2.3265931928536363E-4 0.0 0.0 3.664849597383048 0.0 29 2.3265931928536363E-4 0.0 0.0 3.754772424286841 0.0 30 2.3265931928536363E-4 0.0 0.0 3.8756389406555876 0.0 31 2.3265931928536363E-4 0.0 0.0 3.9801029750147157 0.0 32 2.3265931928536363E-4 0.0 0.0 4.107367622663809 0.0 33 2.3265931928536363E-4 0.0 0.0 4.218462447622571 0.0 34 2.3265931928536363E-4 0.0 0.0 4.319320262532776 0.0 35 2.3265931928536363E-4 0.0 0.0 4.444258316989016 0.0 36 2.3265931928536363E-4 0.0 0.0 4.549420329306001 0.0 37 2.3265931928536363E-4 0.0 0.0 4.658886539029764 0.0 38 2.3265931928536363E-4 0.0 0.0 4.789524746808496 0.0 39 2.3265931928536363E-4 0.0 0.0 5.015902264473155 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTAT 30 2.1648611E-6 45.000004 21 TCTAGCG 20 7.0322945E-4 45.0 1 CGTTTTT 3765 0.0 40.458168 1 ACGTTAG 45 1.9274012E-8 40.0 1 TACGTAG 40 3.456862E-7 39.375 1 GTACGGG 260 0.0 38.94231 3 TACGGGT 105 0.0 38.57143 4 CGGGTAT 70 0.0 38.571426 6 TCATACG 35 6.2464514E-6 38.571426 1 TAATGCG 35 6.2464514E-6 38.571426 1 TATGGGT 200 0.0 38.25 4 ACGTAGG 95 0.0 37.894737 2 GGGCGAT 2145 0.0 37.762238 7 CGATCGA 30 1.13968235E-4 37.500004 10 TCGTAAG 90 0.0 37.5 1 AGGGCGA 1045 0.0 37.464115 6 GTAGCAT 505 0.0 37.425743 29 ACGGGCT 145 0.0 37.24138 5 AGGGATT 560 0.0 36.964283 6 TACGGGA 220 0.0 36.81818 4 >>END_MODULE