SRR1547666_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547666_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	7219605
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36384	0.5039610892839705	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	10039	0.13905192874125386	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	23220	40.503876	1
CATAGCG	255	39.705883	1
AGGGAAC	11085	39.53992	6
TACGGGA	2205	39.489796	4
TAACGCG	315	39.285713	1
TATAGCG	445	38.932583	1
CGTTCGG	1390	38.68705	45
CGTAAGG	945	38.57143	2
GCGAGAC	9285	38.336025	21
TACGAAC	100	38.25	39
CGAGACA	9425	37.62334	22
ACGGGAC	1905	37.559055	5
CGAATAT	450	37.5	14
ATAGCGG	1405	37.313168	2
TAGGGCG	2950	37.29661	5
TAAGGGA	8830	37.279163	4
AGCGGGA	6225	37.19277	4
CGGTCTA	115	37.173912	31
GGGCGAT	17195	37.122707	7
AGACACG	9530	37.043545	24