##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547666_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 7219605 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.432524078533383 31.0 31.0 33.0 30.0 34.0 2 31.82840072275422 31.0 31.0 34.0 30.0 34.0 3 31.97320158097292 33.0 31.0 34.0 30.0 34.0 4 35.659007660391396 37.0 35.0 37.0 33.0 37.0 5 35.545138411311974 37.0 35.0 37.0 33.0 37.0 6 35.58778700496772 37.0 35.0 37.0 33.0 37.0 7 36.012607199424345 37.0 35.0 37.0 35.0 37.0 8 36.028078682975035 37.0 35.0 37.0 35.0 37.0 9 37.75701496134484 39.0 38.0 39.0 35.0 39.0 10 37.152223563477506 39.0 37.0 39.0 33.0 39.0 11 36.887687622799305 39.0 37.0 39.0 32.0 39.0 12 36.360997589203286 38.0 35.0 39.0 32.0 39.0 13 36.15406521547924 38.0 35.0 39.0 32.0 39.0 14 37.21550431083141 39.0 35.0 41.0 32.0 41.0 15 37.39602263558741 39.0 35.0 41.0 32.0 41.0 16 37.469374155511275 39.0 35.0 41.0 32.0 41.0 17 37.34099760305446 39.0 35.0 41.0 32.0 41.0 18 37.274935124567065 39.0 35.0 41.0 32.0 41.0 19 37.244673219656754 39.0 35.0 41.0 32.0 41.0 20 37.15800864451725 39.0 35.0 41.0 32.0 41.0 21 37.021531094845216 39.0 35.0 41.0 32.0 41.0 22 36.92679336334883 39.0 35.0 41.0 31.0 41.0 23 36.842730592601676 38.0 35.0 41.0 31.0 41.0 24 36.7380455024894 38.0 35.0 41.0 31.0 41.0 25 36.60282813256404 38.0 35.0 40.0 31.0 41.0 26 36.449477222091794 38.0 35.0 40.0 31.0 41.0 27 36.43112372491293 38.0 35.0 40.0 31.0 41.0 28 36.468166610223136 38.0 35.0 40.0 31.0 41.0 29 36.45792325203387 38.0 35.0 41.0 31.0 41.0 30 36.46599294559744 38.0 35.0 41.0 31.0 41.0 31 36.33289909905043 38.0 35.0 41.0 30.0 41.0 32 36.10635083221312 38.0 35.0 40.0 30.0 41.0 33 36.007418965442014 38.0 35.0 40.0 30.0 41.0 34 35.85128715490667 38.0 35.0 40.0 29.0 41.0 35 35.74793994962328 38.0 35.0 40.0 29.0 41.0 36 35.59616724183664 38.0 35.0 40.0 28.0 41.0 37 35.33464406986255 38.0 34.0 40.0 27.0 41.0 38 35.38909801852041 38.0 34.0 40.0 27.0 41.0 39 35.314641590502525 38.0 34.0 40.0 27.0 41.0 40 35.15329079638013 37.0 34.0 40.0 26.0 41.0 41 35.13129665681156 37.0 34.0 40.0 26.0 41.0 42 35.10309843821096 37.0 34.0 40.0 27.0 41.0 43 35.00158443571359 37.0 34.0 40.0 26.0 41.0 44 34.84480286663882 37.0 34.0 40.0 26.0 41.0 45 34.74819024032478 37.0 34.0 40.0 26.0 41.0 46 34.55061945909783 36.0 34.0 40.0 24.0 41.0 47 34.56386658272856 36.0 34.0 40.0 25.0 41.0 48 34.42111334345854 36.0 34.0 40.0 24.0 41.0 49 34.403629422939346 36.0 34.0 40.0 24.0 41.0 50 34.26090153131646 36.0 33.0 40.0 24.0 41.0 51 33.58539199859272 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 4.0 11 2.0 12 12.0 13 20.0 14 58.0 15 235.0 16 583.0 17 1461.0 18 3257.0 19 6184.0 20 10480.0 21 16896.0 22 25659.0 23 37542.0 24 53966.0 25 74879.0 26 97974.0 27 117673.0 28 133273.0 29 151689.0 30 180054.0 31 216622.0 32 268174.0 33 344284.0 34 559111.0 35 881576.0 36 564751.0 37 699788.0 38 1019489.0 39 1752750.0 40 1157.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.03774860258975 24.375807263693787 27.9440357194057 13.642408414310756 2 28.987084473458037 26.793584967598644 28.845774803469165 15.373555755474158 3 28.824790275922297 26.424672817972727 30.76100423776647 13.989532668338503 4 24.177042926863727 29.953757857943753 29.664309889529967 16.204889325662553 5 23.73560603384811 32.6545427346787 28.629336369510522 14.980514861962671 6 21.658594895427104 40.644356581835154 25.900959955565433 11.796088567172305 7 88.46597563163081 3.9139952947564303 6.009359237797636 1.6106698358151175 8 88.75525738596502 3.2501085585707252 5.500162405006922 2.4944716504573314 9 82.9163645379491 5.903854850784772 8.034151452884194 3.145629158381934 10 41.710716860548466 33.84651930403395 12.830147909754066 11.612615925663523 11 35.86135252551906 25.031466402940328 24.709440474929032 14.39774059661159 12 31.46882689565426 24.130710752181038 26.230562475370885 18.169899876793814 13 22.222240690453287 34.48728843198485 26.834598291734796 16.455872585827063 14 17.914428836480667 35.61106182401946 28.21999264502698 18.254516694472898 15 17.301098882833617 25.26609142743959 39.37449486502378 18.058314824703015 16 20.75264505468097 23.312106410253747 38.02620780499764 17.909040730067645 17 19.167530633601146 23.529791449809235 28.877410883282394 28.42526703330722 18 23.933345383854103 23.3188796339966 30.96933973534563 21.778435246803667 19 26.29059346044555 26.78333509935793 26.16144512061255 20.764626319583968 20 29.970933312833598 24.891998939000125 24.794334316074078 20.3427334320922 21 24.76828025910005 28.46456281195439 26.63809169615235 20.129065232793206 22 24.544168275134165 24.57767426334266 26.20499320946229 24.673164252060882 23 21.606943870197885 31.360995511527296 24.802922043519 22.229138574755822 24 21.674440637680316 25.65284388827367 33.32909487430407 19.343620599741953 25 20.77410052211998 27.120721978557 30.962386446349903 21.14279105297312 26 20.029683064378176 32.19973945943026 26.75812596395509 21.012451512236474 27 20.85568393284674 29.519703640296107 27.400917363207544 22.223695063649604 28 18.161270595828995 30.401718653582847 32.10758760347692 19.329423147111232 29 19.175328844168067 26.83331013261806 31.69580607249289 22.295554950720987 30 21.38054644263779 27.658119800182973 30.240726466337147 20.72060729084209 31 26.388992195556405 27.692456858789367 24.356637239848993 21.561913705805235 32 25.09615138224321 28.64087439686797 26.090097726953204 20.17287649393561 33 23.181379036664747 28.7155876256388 24.888272973382893 23.214760364313562 34 19.60442434177493 30.20260803742033 28.332644237461746 21.860323383342994 35 19.238961134300283 29.25671141288201 28.465463138218784 23.03886431459893 36 23.953415733963286 29.765395752260687 25.696364274776805 20.584824238999225 37 21.074283149839914 30.294302804654826 26.3459981536386 22.285415891866663 38 20.870255367156513 31.069802295277928 25.21618565004595 22.84375668751961 39 21.935618361392347 28.76227993082724 25.297824465465908 24.004277242314505 40 23.802451796185526 26.79271234368085 25.848976502177056 23.555859357956564 41 18.318564519804063 26.84031882630698 26.739385326482545 28.101731327406416 42 23.092662271689377 27.410059137584398 24.48832034439557 25.008958246330653 43 22.778905494137145 26.97626809222942 26.046591191623364 24.198235222010066 44 22.236022607885058 29.53949696693933 26.50866633285339 21.715814092322226 45 20.76929416498548 30.562253752109708 24.56977909456265 24.09867298834216 46 22.913982136141797 28.71134916660953 25.56385009983233 22.81081859741634 47 22.279626101427986 27.63671973743716 27.47284650614542 22.610807654989433 48 23.620308867313376 25.557201536649167 28.360609756350936 22.46187983968652 49 22.201463930505895 25.544873992413713 28.354016597860966 23.89964547921943 50 20.526275329467474 29.327504759609425 27.34969572435057 22.796524186572533 51 20.273200542134923 29.607104543808145 25.296439348136087 24.823255565920853 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 5002.0 1 6372.0 2 7742.0 3 34104.0 4 60466.0 5 42331.0 6 24196.0 7 25542.5 8 26889.0 9 29317.0 10 31745.0 11 33707.5 12 35670.0 13 36173.5 14 36677.0 15 35973.0 16 35269.0 17 35106.0 18 34943.0 19 34479.5 20 34016.0 21 34938.5 22 35861.0 23 36699.5 24 37538.0 25 43967.0 26 55231.0 27 60066.0 28 76795.5 29 93525.0 30 102754.0 31 111983.0 32 129077.0 33 146171.0 34 169477.0 35 192783.0 36 205545.0 37 218307.0 38 247048.5 39 275790.0 40 344973.5 41 414157.0 42 472570.0 43 530983.0 44 553777.0 45 576571.0 46 585303.0 47 594035.0 48 595195.0 49 596355.0 50 596172.5 51 595990.0 52 555561.5 53 515133.0 54 460875.5 55 406618.0 56 365847.5 57 325077.0 58 298443.0 59 271809.0 60 247720.0 61 223631.0 62 205362.0 63 187093.0 64 162091.0 65 137089.0 66 114673.5 67 92258.0 68 74814.0 69 57370.0 70 49004.0 71 40638.0 72 36685.0 73 32732.0 74 32538.0 75 26637.0 76 20930.0 77 14313.5 78 7697.0 79 5455.5 80 3214.0 81 2547.0 82 1880.0 83 1227.5 84 575.0 85 430.5 86 286.0 87 171.5 88 57.0 89 46.5 90 36.0 91 21.5 92 7.0 93 5.5 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 7219605.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.862176451739753 #Duplication Level Percentage of deduplicated Percentage of total 1 79.82944512655509 13.46098189768448 2 8.762625458683523 2.9551387332965713 3 2.8697408447379424 1.4517022948420766 4 1.3675029582284364 0.9223630471969595 5 0.8049464625802814 0.6786574643116215 6 0.5334129238100336 0.5396701705753918 7 0.42348911703721187 0.4998663751811054 8 0.30089553899274013 0.4059002937629539 9 0.2632048545802448 0.3994386030797931 >10 2.406559571347919 9.279257566159252 >50 0.8516343205971632 10.421231621447864 >100 1.5608117276942617 54.36856617375878 >500 0.02005020402051188 2.1749475590858505 >1k 0.0053467210678338145 1.6288616465672379 >5k 1.670850333698067E-4 0.15945173294958456 >10k+ 1.670850333698067E-4 0.6539648201005888 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36384 0.5039610892839705 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 10039 0.13905192874125386 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.7702346596524325E-5 0.0 0.0 0.06224717280239016 0.0 2 2.7702346596524325E-5 0.0 0.0 0.2030166470326285 0.0 3 2.7702346596524325E-5 0.0 0.0 0.3064987627439451 0.0 4 2.7702346596524325E-5 0.0 0.0 0.4977696148196473 0.0 5 2.7702346596524325E-5 0.0 0.0 0.8197539893110496 0.0 6 2.7702346596524325E-5 0.0 0.0 1.5131852781419481 0.0 7 2.7702346596524325E-5 0.0 0.0 1.85701295292471 0.0 8 2.7702346596524325E-5 0.0 0.0 2.7521588784982005 0.0 9 2.7702346596524325E-5 0.0 0.0 3.231631093390843 0.0 10 2.7702346596524325E-5 0.0 0.0 3.9277356586683068 0.0 11 2.7702346596524325E-5 0.0 0.0 4.424092453811531 0.0 12 2.7702346596524325E-5 0.0 0.0 4.8605567756130705 0.0 13 2.7702346596524325E-5 0.0 0.0 5.119629120983766 0.0 14 2.7702346596524325E-5 0.0 0.0 5.256187838531332 0.0 15 2.7702346596524325E-5 0.0 0.0 5.37895078747383 0.0 16 2.7702346596524325E-5 0.0 0.0 5.565900073480474 0.0 17 2.7702346596524325E-5 0.0 0.0 5.764013405165518 0.0 18 2.7702346596524325E-5 0.0 0.0 6.056342417625341 0.0 19 4.155351989478649E-5 0.0 0.0 6.200699345739829 0.0 20 1.108093863860973E-4 0.0 0.0 6.341011731251225 0.0 21 1.108093863860973E-4 0.0 0.0 6.501740746204259 0.0 22 1.2466055968435948E-4 0.0 0.0 6.672054773079691 0.0 23 1.2466055968435948E-4 0.0 0.0 6.869046159727575 0.0 24 1.2466055968435948E-4 0.0 0.0 7.023057355630952 0.0 25 1.2466055968435948E-4 0.0 0.0 7.151333071546158 0.0 26 1.3851173298262164E-4 0.0 0.0 7.286880653442951 0.0 27 1.3851173298262164E-4 0.0 0.0 7.431362242117124 0.0 28 1.3851173298262164E-4 0.0 0.0 7.582090709948813 0.0 29 1.3851173298262164E-4 0.0 0.0 7.72948104501562 0.0 30 1.523629062808838E-4 0.0 0.0 7.963593576102848 0.0 31 1.523629062808838E-4 0.0 0.0 8.13263329503484 0.0 32 1.523629062808838E-4 0.0 0.0 8.398465012975086 0.0 33 1.523629062808838E-4 0.0 0.0 8.571438465123784 0.0 34 1.523629062808838E-4 0.0 0.0 8.725906749746004 0.0 35 1.6621407957914596E-4 0.0 0.0 8.892231638711536 0.0 36 1.6621407957914596E-4 0.0 0.0 9.050522847164077 0.0 37 1.6621407957914596E-4 0.0 0.0 9.212803193526515 0.0 38 1.6621407957914596E-4 0.0 0.0 9.372188644669619 0.0 39 1.6621407957914596E-4 0.0 0.0 9.541477684720979 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 23220 0.0 40.503876 1 CATAGCG 255 0.0 39.705883 1 AGGGAAC 11085 0.0 39.53992 6 TACGGGA 2205 0.0 39.489796 4 TAACGCG 315 0.0 39.285713 1 TATAGCG 445 0.0 38.932583 1 CGTTCGG 1390 0.0 38.68705 45 CGTAAGG 945 0.0 38.57143 2 GCGAGAC 9285 0.0 38.336025 21 TACGAAC 100 0.0 38.25 39 CGAGACA 9425 0.0 37.62334 22 ACGGGAC 1905 0.0 37.559055 5 CGAATAT 450 0.0 37.5 14 ATAGCGG 1405 0.0 37.313168 2 TAGGGCG 2950 0.0 37.29661 5 TAAGGGA 8830 0.0 37.279163 4 AGCGGGA 6225 0.0 37.19277 4 CGGTCTA 115 0.0 37.173912 31 GGGCGAT 17195 0.0 37.122707 7 AGACACG 9530 0.0 37.043545 24 >>END_MODULE