##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547663_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2826105 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.431267061910297 31.0 31.0 33.0 30.0 34.0 2 31.853046153628405 31.0 31.0 34.0 30.0 34.0 3 31.92000474150819 31.0 31.0 34.0 30.0 34.0 4 35.66812768810784 37.0 35.0 37.0 33.0 37.0 5 35.578635259482574 37.0 35.0 37.0 33.0 37.0 6 35.63720633168265 37.0 35.0 37.0 33.0 37.0 7 36.04239439086658 37.0 35.0 37.0 35.0 37.0 8 36.063712423989905 37.0 35.0 37.0 35.0 37.0 9 37.82724668757884 39.0 38.0 39.0 35.0 39.0 10 37.12491998704931 39.0 37.0 39.0 33.0 39.0 11 36.940091044034105 39.0 37.0 39.0 33.0 39.0 12 36.56104284872643 39.0 35.0 39.0 32.0 39.0 13 36.45841255013526 39.0 35.0 39.0 32.0 39.0 14 37.55249079563569 40.0 36.0 41.0 32.0 41.0 15 37.67433481770847 40.0 36.0 41.0 33.0 41.0 16 37.70590760074378 40.0 36.0 41.0 33.0 41.0 17 37.63871653742518 40.0 36.0 41.0 33.0 41.0 18 37.43949216324234 39.0 36.0 41.0 32.0 41.0 19 37.29552971315645 39.0 36.0 41.0 32.0 41.0 20 37.095143315623446 39.0 35.0 41.0 32.0 41.0 21 37.01076711587149 38.0 35.0 41.0 32.0 41.0 22 36.92335281243974 38.0 35.0 41.0 32.0 41.0 23 36.81557833130758 38.0 35.0 41.0 32.0 41.0 24 36.71399505680079 38.0 35.0 40.0 31.0 41.0 25 36.59017057044944 38.0 35.0 40.0 31.0 41.0 26 36.4521534054821 38.0 35.0 40.0 31.0 41.0 27 36.40751175204035 38.0 35.0 40.0 31.0 41.0 28 36.39866565467313 38.0 35.0 40.0 31.0 41.0 29 36.3238283786342 38.0 35.0 40.0 30.0 41.0 30 36.2926476546342 38.0 35.0 40.0 30.0 41.0 31 36.088503788783505 38.0 35.0 40.0 30.0 41.0 32 35.7137544429524 38.0 35.0 40.0 29.0 41.0 33 35.348865311090705 38.0 34.0 40.0 25.0 41.0 34 34.89105288020084 38.0 34.0 40.0 23.0 41.0 35 34.60505890616237 38.0 34.0 40.0 21.0 41.0 36 34.40830471620835 38.0 34.0 40.0 20.0 41.0 37 34.140730793795704 38.0 33.0 40.0 18.0 41.0 38 34.19583879579846 38.0 33.0 40.0 18.0 41.0 39 34.06864571556966 38.0 33.0 40.0 18.0 41.0 40 33.95408981619579 38.0 33.0 40.0 18.0 41.0 41 33.89268657746262 38.0 33.0 40.0 18.0 41.0 42 33.857576417012105 37.0 33.0 40.0 18.0 41.0 43 33.78410143996773 37.0 33.0 40.0 17.0 41.0 44 33.638433462309436 37.0 33.0 40.0 17.0 41.0 45 33.596623267712985 37.0 33.0 40.0 17.0 41.0 46 33.42735390227893 37.0 33.0 40.0 16.0 41.0 47 33.43927101080816 37.0 33.0 40.0 17.0 41.0 48 33.262152326258224 36.0 33.0 40.0 15.0 41.0 49 33.242294960732174 36.0 33.0 40.0 15.0 41.0 50 33.106660580551676 36.0 32.0 40.0 15.0 41.0 51 32.43236503951552 35.0 31.0 39.0 13.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 2.0 11 1.0 12 1.0 13 13.0 14 32.0 15 108.0 16 224.0 17 698.0 18 1465.0 19 3164.0 20 5621.0 21 9174.0 22 13970.0 23 21222.0 24 33404.0 25 53464.0 26 73444.0 27 74398.0 28 64845.0 29 61912.0 30 67537.0 31 79580.0 32 97326.0 33 125234.0 34 196475.0 35 275547.0 36 214024.0 37 273247.0 38 397347.0 39 682268.0 40 355.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.055781720778242 23.168353617434597 27.037813527805937 18.73805113398122 2 36.028880738684514 24.47414374200534 27.037424299521778 12.459551219788366 3 26.337238000711228 24.020232793898316 36.5386990221524 13.10383018323806 4 22.8227189011024 26.837891727306662 36.2484762597285 14.090913111862442 5 20.963835384743312 30.49469145696993 35.45409671615173 13.087376442135024 6 18.87007029108968 39.31035824925117 32.19310676708756 9.626464692571577 7 83.47464089267737 3.3822876361635537 11.819942995748566 1.323128475410503 8 84.15487039582747 2.656518423766987 11.443877704473119 1.7447334759324231 9 78.87647486558355 4.674419386399302 13.670829640087684 2.778276107929465 10 38.8872317199821 19.70814955566053 25.484615752068663 15.920002972288716 11 33.18125122739601 25.781066167039086 24.737226677706598 16.300455927858305 12 26.286744476939113 22.32825744266402 32.65512074038296 18.729877340013907 13 22.00576411704448 27.60343299346627 33.68339109834914 16.707411791140103 14 20.504652162605424 28.87242335298936 34.187229419996775 16.435695064408435 15 20.047273544330448 23.912381174797115 39.96295254422606 16.077392736646374 16 20.812567119763774 21.224547566350154 38.86861953112145 19.09426578276462 17 21.789600881778988 22.967724129145946 32.798427517732 22.44424747134307 18 23.794409620307807 22.90502299100706 34.64793417088183 18.652633217803302 19 25.54204461617668 25.84801343191424 30.220214747859686 18.38972720404939 20 25.791186102427194 24.328572363730295 30.922948722712 18.957292811130515 21 23.61097694530104 25.90144386001228 32.14852243635675 18.339056758329928 22 23.040332896336125 23.551035789540727 32.1640561833336 21.24457513078955 23 21.41442020024026 26.40903292694362 31.095730696488634 21.08081617632749 24 21.722052082282858 24.562781637624926 34.7706118491705 18.94455443092171 25 20.969779962174087 25.13236415490578 33.776239736315524 20.1216161466046 26 20.0491489169723 27.52441965178222 32.20980819891688 20.216623232328594 27 20.9202772013071 25.893376219213373 32.992581662747845 20.193764916731684 28 20.034782854847926 25.519540144474462 35.349217385765925 19.09645961491169 29 20.532110448833286 24.697490008333023 34.52277958533034 20.24761995750335 30 21.237321330948426 25.45082366012586 33.87903138772268 19.43282362120303 31 23.821443293862046 24.69051928360765 31.467691398585686 20.020346023944615 32 24.151862722722615 24.72229446535072 31.251952775993814 19.87389003593285 33 24.152287335396245 25.2759186229811 29.683539712784913 20.888254328837746 34 21.849718959486644 26.466744866167392 30.357576947777947 21.325959226568013 35 21.957853653703594 26.72628936292176 29.89683681250343 21.419020170871217 36 25.38412408597699 26.25270469427003 27.128468333625257 21.234702886127728 37 22.314174455655397 28.08915450770584 28.866195700442837 20.73047533619593 38 23.986016089281893 28.086889906779827 26.807673458700226 21.119420545238057 39 22.819711227997544 27.490556791060488 27.400680441809488 22.289051539132483 40 23.729196190516628 26.14980688969447 27.169054228346077 22.951942691442817 41 21.30649781236012 25.098501294184043 28.204224542258693 25.390776351197143 42 22.812315890598544 26.465011031083417 27.39958352573595 23.32308955258209 43 22.459038146141065 26.30266745220011 28.5828375095759 22.65545689208292 44 22.11319112347206 27.79005026352524 27.99082128937177 22.105937323630933 45 21.27833183834288 28.653323213397947 27.05978723366612 23.008557714593053 46 23.08838489723489 27.74709361471 27.36009454708866 21.804426940966454 47 22.828026559522733 26.539672092862794 28.727170434219534 21.905130913394938 48 23.42386429378951 25.857850292186598 28.573319108808764 22.144966305215128 49 23.060431229554457 25.158937831396923 28.583049815912716 23.197581123135908 50 21.601674389309668 27.389003593284748 28.32771606150515 22.681605955900437 51 20.806021007712026 28.296153186098888 27.445158619371888 23.45266718681719 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1284.0 1 1726.0 2 2168.0 3 20092.0 4 38016.0 5 28733.5 6 19451.0 7 20310.0 8 21169.0 9 22832.5 10 24496.0 11 25796.0 12 27096.0 13 27549.0 14 28002.0 15 27838.0 16 27674.0 17 27291.5 18 26909.0 19 26102.5 20 25296.0 21 24566.0 22 23836.0 23 23937.5 24 24039.0 25 23763.5 26 24709.5 27 25931.0 28 28994.0 29 32057.0 30 35752.0 31 39447.0 32 44422.0 33 49397.0 34 58443.0 35 67489.0 36 74588.5 37 81688.0 38 91534.0 39 101380.0 40 120868.5 41 140357.0 42 157507.0 43 174657.0 44 182591.0 45 190525.0 46 196782.5 47 203040.0 48 210411.5 49 217783.0 50 221156.0 51 224529.0 52 212831.5 53 201134.0 54 185881.5 55 170629.0 56 156449.0 57 142269.0 58 129516.5 59 116764.0 60 105837.0 61 94910.0 62 85865.5 63 76821.0 64 65512.0 65 54203.0 66 46882.0 67 39561.0 68 32224.5 69 24888.0 70 20282.5 71 15677.0 72 13756.0 73 11835.0 74 9713.0 75 5935.5 76 4280.0 77 3336.5 78 2393.0 79 1713.0 80 1033.0 81 779.0 82 525.0 83 383.0 84 241.0 85 168.5 86 96.0 87 65.5 88 35.0 89 20.0 90 5.0 91 6.0 92 7.0 93 4.5 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2826105.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.531224376712494 #Duplication Level Percentage of deduplicated Percentage of total 1 78.24976579925878 22.325616254438557 2 6.194218394256102 3.5345726968976123 3 2.568170523599191 2.1981914833940315 4 1.6235673050306845 1.852894522820995 5 1.200444606832201 1.712507721467197 6 0.9337486949989041 1.5984596117085728 7 0.7692650222509541 1.536365106849909 8 0.6482455847680804 1.479619218418504 9 0.5822194674940905 1.4950290837207565 >10 6.161530044565564 38.60773485665035 >50 0.9594669746498393 18.459176925643455 >100 0.10759350776677681 4.062742717380749 >500 0.0013860585583453694 0.24888781465171778 >1k 2.5201064697188394E-4 0.12683463962028832 >5k 0.0 0.0 >10k+ 1.2600532348594197E-4 0.7613673463374337 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21178 0.7493706001723219 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.076877893779602E-5 0.0 0.0 0.02894443058555857 0.0 2 7.076877893779602E-5 0.0 0.0 0.08456869083066623 0.0 3 7.076877893779602E-5 0.0 0.0 0.15218825910573033 0.0 4 7.076877893779602E-5 0.0 0.0 0.2412153830094777 0.0 5 7.076877893779602E-5 0.0 0.0 0.3814791028641894 0.0 6 7.076877893779602E-5 0.0 0.0 0.8343992880660839 0.0 7 7.076877893779602E-5 0.0 0.0 1.0820546299589011 0.0 8 7.076877893779602E-5 0.0 0.0 1.7295889572397345 0.0 9 7.076877893779602E-5 0.0 0.0 2.153423174298195 0.0 10 1.0615316840669402E-4 0.0 0.0 2.714973435169606 0.0 11 1.0615316840669402E-4 0.0 0.0 3.061351223680649 0.0 12 1.0615316840669402E-4 0.0 0.0 3.380730723026922 0.0 13 1.0615316840669402E-4 0.0 0.0 3.597637030471267 0.0 14 1.0615316840669402E-4 0.0 0.0 3.715183972286946 0.0 15 1.0615316840669402E-4 0.0 0.0 3.797877290475761 0.0 16 1.0615316840669402E-4 0.0 0.0 3.910470417765794 0.0 17 1.0615316840669402E-4 0.0 0.0 4.032369639486148 0.0 18 1.0615316840669402E-4 0.0 0.0 4.207876211251882 0.0 19 1.4153755787559203E-4 0.0 0.0 4.3090401807434615 0.0 20 2.8307511575118407E-4 0.0 0.0 4.420607160738897 0.0 21 2.8307511575118407E-4 3.538438946889801E-5 0.0 4.551777092500101 0.0 22 3.538438946889801E-4 3.538438946889801E-5 0.0 4.690731589944464 0.0 23 3.538438946889801E-4 3.538438946889801E-5 0.0 4.858878208700667 0.0 24 3.538438946889801E-4 3.538438946889801E-5 0.0 4.9947542642612355 0.0 25 3.538438946889801E-4 1.4153755787559203E-4 0.0 5.118988855686537 0.0 26 3.538438946889801E-4 1.4153755787559203E-4 0.0 5.242551143711928 0.0 27 3.538438946889801E-4 1.4153755787559203E-4 0.0 5.381010259703727 0.0 28 3.538438946889801E-4 1.4153755787559203E-4 0.0 5.517240159158984 0.0 29 3.538438946889801E-4 1.4153755787559203E-4 0.0 5.66312999693925 0.0 30 3.538438946889801E-4 1.4153755787559203E-4 0.0 5.867510230511606 0.0 31 3.538438946889801E-4 1.4153755787559203E-4 0.0 6.020547714964589 0.0 32 3.538438946889801E-4 1.4153755787559203E-4 0.0 6.186111273289563 0.0 33 3.538438946889801E-4 1.4153755787559203E-4 0.0 6.349587152635872 0.0 34 3.538438946889801E-4 1.4153755787559203E-4 0.0 6.5140891792767786 0.0 35 3.538438946889801E-4 1.4153755787559203E-4 0.0 6.6975572386730144 0.0 36 3.538438946889801E-4 1.4153755787559203E-4 0.0 6.861528499471888 0.0 37 3.538438946889801E-4 1.4153755787559203E-4 0.0 7.050162679730583 0.0 38 3.538438946889801E-4 1.4153755787559203E-4 0.0 7.259921340502211 0.0 39 3.538438946889801E-4 1.4153755787559203E-4 0.0 7.546641048368691 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATCG 20 7.0350355E-4 45.0 2 CGTTTTT 26360 0.0 43.685505 1 GTTTTTT 30170 0.0 38.72058 2 TCGTTAG 105 0.0 38.57143 1 TCGATAG 210 0.0 38.57143 1 AGGGCGA 3245 0.0 38.20493 6 CAGTACG 65 9.094947E-12 38.076927 1 TAACGGG 800 0.0 37.687496 3 GGGCGAT 6335 0.0 37.434887 7 GCGATAT 465 0.0 37.25806 9 TAGGGAC 1965 0.0 36.29771 5 GGCGATA 1460 0.0 36.215755 8 TACGGGT 430 0.0 36.104652 4 TAGGGTG 2500 0.0 36.09 5 ACGGGTA 505 0.0 36.08911 5 TATGGGC 1765 0.0 36.076485 4 ACGATAC 25 0.0021076282 35.999996 38 CGCGTAA 25 0.0021076282 35.999996 31 CGTTAGG 395 0.0 35.886078 2 AGTACGG 290 0.0 35.68966 2 >>END_MODULE