##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547662_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4578797 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.393385424162723 31.0 31.0 33.0 30.0 34.0 2 31.800728444611106 31.0 31.0 34.0 30.0 34.0 3 31.799768367106033 31.0 31.0 34.0 30.0 34.0 4 35.566765244233366 37.0 35.0 37.0 33.0 37.0 5 35.47962685395312 37.0 35.0 37.0 33.0 37.0 6 35.541620648393014 37.0 35.0 37.0 33.0 37.0 7 36.009560371425074 37.0 35.0 37.0 35.0 37.0 8 36.037046193574426 37.0 35.0 37.0 35.0 37.0 9 37.77351911430011 39.0 38.0 39.0 35.0 39.0 10 37.12076731071502 39.0 37.0 39.0 33.0 39.0 11 36.89513730353191 39.0 37.0 39.0 32.0 39.0 12 36.494660278671454 39.0 35.0 39.0 32.0 39.0 13 36.34158732086179 39.0 35.0 39.0 32.0 39.0 14 37.484884785239444 40.0 36.0 41.0 32.0 41.0 15 37.623858843272586 40.0 36.0 41.0 32.0 41.0 16 37.66980868555649 40.0 35.0 41.0 33.0 41.0 17 37.59459198562417 39.0 35.0 41.0 32.0 41.0 18 37.340484629478006 39.0 36.0 40.0 32.0 41.0 19 37.13113335227572 38.0 36.0 40.0 32.0 41.0 20 36.852875329480646 38.0 35.0 40.0 32.0 41.0 21 36.745870367260224 38.0 35.0 40.0 32.0 41.0 22 36.66403817421912 38.0 35.0 40.0 32.0 41.0 23 36.55474090683644 38.0 35.0 40.0 31.0 41.0 24 36.42686648916735 38.0 35.0 40.0 31.0 41.0 25 36.29768714358815 38.0 35.0 40.0 31.0 41.0 26 36.14761082441523 37.0 35.0 40.0 31.0 41.0 27 36.05263456755126 37.0 35.0 40.0 30.0 41.0 28 36.06487249816928 37.0 35.0 40.0 31.0 41.0 29 35.930900627391864 37.0 35.0 40.0 30.0 41.0 30 35.86760015785806 37.0 35.0 40.0 30.0 41.0 31 35.59078268811655 37.0 35.0 40.0 29.0 41.0 32 35.12100711169331 37.0 34.0 40.0 25.0 41.0 33 34.61891758905232 37.0 34.0 40.0 23.0 41.0 34 34.07505726940941 37.0 33.0 40.0 20.0 41.0 35 33.70819060115572 37.0 33.0 40.0 18.0 41.0 36 33.4489478349881 37.0 33.0 40.0 15.0 41.0 37 33.14934992750279 36.0 33.0 40.0 15.0 41.0 38 33.17663176594201 36.0 33.0 40.0 15.0 41.0 39 33.072085964937955 36.0 33.0 40.0 14.0 41.0 40 32.94943431648095 36.0 32.0 40.0 12.0 41.0 41 32.907887595803004 36.0 32.0 40.0 12.0 41.0 42 32.85314592457364 36.0 32.0 40.0 11.0 41.0 43 32.7837462547477 36.0 32.0 40.0 10.0 41.0 44 32.63005042590881 35.0 32.0 40.0 10.0 41.0 45 32.596724205069584 35.0 32.0 40.0 10.0 41.0 46 32.41511034448568 35.0 31.0 40.0 10.0 41.0 47 32.44164766422272 35.0 31.0 40.0 10.0 41.0 48 32.24174777785519 35.0 31.0 40.0 10.0 41.0 49 32.22282599556171 35.0 31.0 40.0 10.0 41.0 50 32.083624366836965 35.0 31.0 40.0 10.0 41.0 51 31.445394063113085 35.0 30.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 6.0 13 18.0 14 50.0 15 166.0 16 494.0 17 1377.0 18 3448.0 19 6520.0 20 11321.0 21 18063.0 22 27780.0 23 41418.0 24 64582.0 25 103548.0 26 143584.0 27 145926.0 28 125864.0 29 115401.0 30 121064.0 31 137718.0 32 165202.0 33 207055.0 34 320581.0 35 494737.0 36 373727.0 37 418332.0 38 565653.0 39 964554.0 40 605.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.066957980447704 22.867119900707543 26.062238618571648 22.00368350027311 2 38.9301382000556 24.022903832600573 25.55149311052663 11.495464856817195 3 25.009800609199317 23.3807482620435 39.09684137558402 12.512609753173159 4 21.700831026140712 26.003598761858193 38.79521193012051 13.50035828188059 5 19.776875891200245 30.12850318544369 37.551042337102956 12.543578586253116 6 17.920842526978156 37.9645570659717 34.45481422303719 9.659786184012962 7 78.20783494005084 3.6717941415616373 16.419640355316037 1.7007305630714793 8 78.65710141768677 2.9362515962162115 15.988457230141453 2.4181897559555487 9 73.35175593065165 5.255354190194499 18.38179329636147 3.01109658279238 10 36.87422700766162 22.94941225828531 26.623019103052613 13.553341631000457 11 30.782626965117693 24.57385640813515 30.10546219891382 14.538054427833336 12 25.928273299733533 22.283189230708413 35.27765043962421 16.510887029933848 13 19.83935955230162 29.437623026310185 36.568862956798476 14.154154464589716 14 16.992629286688185 32.19577107262017 36.03097058026377 14.78062906042788 15 15.869102735936972 25.79767130973485 44.457834667053376 13.875391287274802 16 17.25994841002997 23.16842174920618 43.52361548240728 16.04801435835657 17 17.19320598838516 24.501086202336552 35.82650639458356 22.47920141469473 18 19.912828631625292 25.55712777832256 37.47790085474416 17.052142735307985 19 22.43145961701294 27.821696397547218 33.03963901435246 16.707204971087382 20 23.698975953727583 25.56256588793956 32.81783402933128 17.92062412900157 21 20.00272123878827 28.53245077255008 34.19926675063341 17.265561238028244 22 20.342614009749724 25.919799458241975 33.203459336589944 20.534127195418357 23 18.10451522528734 29.68539553074749 32.33491242350338 19.875176820461792 24 18.85964806913257 26.72750069505156 38.110315875545474 16.302535360270394 25 17.78449667019525 27.89791729137588 36.358764103322336 17.958821935106535 26 17.125852052405904 31.471366824080647 34.21033952804634 17.192441595467105 27 18.207620910033793 29.71883226096287 34.47759313199515 17.595953697008188 28 16.883910773943462 28.885381902713746 38.29208851145836 15.938618811884432 29 17.33073119424163 26.91047451983567 37.381652866462524 18.377141419460177 30 18.8482258549571 28.914690911171647 35.24864718833353 16.988436045537725 31 21.64710512390045 28.451578001820128 31.888550638956044 18.012766235323383 32 22.430891782273815 28.75242121456793 32.32956167307701 16.48712533008124 33 21.454587307539512 30.33506399169913 30.23573659194762 17.974612108813734 34 18.605804100946166 30.551649265079888 31.686772748387842 19.155773885586104 35 19.879697658577133 29.92997942472663 30.862473265357693 19.32784965133855 36 23.148307295562567 29.607274574522524 29.60229510065635 17.642123029258556 37 21.101110182434383 31.860595697952977 29.663337335112256 17.374956784500384 38 20.077609904959754 32.96092838359071 28.697690681635375 18.263771029814162 39 20.991780155355215 31.655978633689152 28.316673571682692 19.035567639272934 40 21.437530425568113 29.897525485405886 28.652700698458567 20.012243390567434 41 19.646863575738344 28.415957291838883 28.97014215742694 22.967036974995832 42 21.101656177375848 30.208349485683684 27.630357930259848 21.05963640668062 43 20.787774605425835 29.845983562931487 29.056190960201995 20.310050871440684 44 20.455547603442565 31.95638505048378 28.20090080429423 19.387166541779425 45 19.11436562922532 32.938062115442115 27.28017861460117 20.667393640731397 46 21.461313965218377 31.609962180022393 27.27214156906279 19.656582285696437 47 21.12816969173344 29.98807328649862 28.322679516038818 20.561077505729124 48 21.330013101694615 28.38828626820538 29.31049356413923 20.971207065960776 49 20.4562683167653 27.564292542342457 29.819098772013696 22.16034036887855 50 19.18431850112595 30.654165275289557 29.438037982465698 20.72347824111879 51 18.647518114474174 31.586440717944036 27.96077222903745 21.80526893854434 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4147.0 1 4710.0 2 5273.0 3 68003.5 4 130734.0 5 87511.0 6 44288.0 7 47781.5 8 51275.0 9 58410.0 10 65545.0 11 71810.5 12 78076.0 13 81197.0 14 84318.0 15 82511.0 16 80704.0 17 76459.5 18 72215.0 19 67695.5 20 63176.0 21 60175.0 22 57174.0 23 55098.0 24 53022.0 25 52985.0 26 51716.5 27 50485.0 28 53022.5 29 55560.0 30 62536.0 31 69512.0 32 78295.5 33 87079.0 34 96520.5 35 105962.0 36 118851.0 37 131740.0 38 150127.0 39 168514.0 40 208719.0 41 248924.0 42 293973.5 43 339023.0 44 370749.5 45 402476.0 46 403888.5 47 405301.0 48 378772.5 49 352244.0 50 320229.0 51 288214.0 52 260637.5 53 233061.0 54 215386.5 55 197712.0 56 177566.0 57 157420.0 58 142117.5 59 126815.0 60 110042.0 61 93269.0 62 82215.0 63 71161.0 64 62009.0 65 52857.0 66 42905.5 67 32954.0 68 28414.5 69 23875.0 70 19600.0 71 15325.0 72 12981.5 73 10638.0 74 8581.0 75 5507.0 76 4490.0 77 3412.0 78 2334.0 79 1882.5 80 1431.0 81 1021.0 82 611.0 83 431.5 84 252.0 85 162.0 86 72.0 87 55.5 88 39.0 89 27.5 90 16.0 91 11.5 92 7.0 93 4.5 94 2.0 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4578797.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.934961476802666 #Duplication Level Percentage of deduplicated Percentage of total 1 79.95177376098029 22.334497200150267 2 6.881557284299141 3.8447207527461456 3 2.85728892150344 2.394547678508809 4 1.6447999541254528 1.8378969342216531 5 1.1667528549467403 1.629659802794336 6 0.8706061378101088 1.4592209352716006 7 0.6451882964545205 1.2616317144718678 8 0.4940986107842928 1.1042100526400747 9 0.39575567164490966 0.9949877497464044 >10 3.828691261046942 23.422260904613694 >50 0.7706969658979294 15.151907995744624 >100 0.4880033992048024 20.49986428513267 >500 0.002712566071531342 0.5195742850933087 >1k 0.0018349711649702316 1.095222386934829 >5k 1.5956270999741145E-4 0.2626955816776043 >10k+ 7.978135499870573E-5 2.187101740251974 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 98134 2.1432267034332377 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTT 5958 0.13012151445019293 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5829 0.127304180552228 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCT 4708 0.1028217673768896 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.183979765864265E-5 0.0 0.0 0.07482314677850972 0.0 2 2.183979765864265E-5 0.0 0.0 0.23316167980366895 0.0 3 2.183979765864265E-5 0.0 0.0 0.4223598469204903 0.0 4 2.183979765864265E-5 0.0 0.0 0.6341403648163481 0.0 5 2.183979765864265E-5 0.0 0.0 1.038482378668458 0.0 6 2.183979765864265E-5 0.0 0.0 2.003517517810901 0.0 7 2.183979765864265E-5 0.0 0.0 2.5515654002568797 0.0 8 2.183979765864265E-5 0.0 0.0 3.6638226154162328 0.0 9 2.183979765864265E-5 0.0 0.0 4.3022654203713335 0.0 10 2.183979765864265E-5 0.0 0.0 5.1202532018781355 0.0 11 2.183979765864265E-5 0.0 0.0 5.610316421540418 0.0 12 2.183979765864265E-5 0.0 0.0 6.049558432051039 0.0 13 2.183979765864265E-5 0.0 0.0 6.327972172603415 0.0 14 2.183979765864265E-5 0.0 0.0 6.478033422315949 0.0 15 2.183979765864265E-5 0.0 0.0 6.60079492495518 0.0 16 2.183979765864265E-5 0.0 0.0 6.789665495107121 0.0 17 2.183979765864265E-5 0.0 0.0 6.991749142842542 0.0 18 2.183979765864265E-5 0.0 0.0 7.321202490523166 0.0 19 2.183979765864265E-5 0.0 0.0 7.46514859689128 0.0 20 6.551939297592796E-5 0.0 0.0 7.639561220993199 0.0 21 6.551939297592796E-5 0.0 0.0 7.826225971581619 0.0 22 1.0919898829321326E-4 0.0 0.0 8.0231554270696 0.0 23 1.0919898829321326E-4 0.0 0.0 8.258413727448499 0.0 24 1.0919898829321326E-4 0.0 0.0 8.446214147515166 0.0 25 1.0919898829321326E-4 0.0 0.0 8.614402429284373 0.0 26 1.0919898829321326E-4 0.0 0.0 8.771932889796163 0.0 27 1.310387859518559E-4 0.0 0.0 8.942348830926552 0.0 28 1.310387859518559E-4 0.0 0.0 9.116499377456568 0.0 29 1.310387859518559E-4 0.0 0.0 9.297114504093543 0.0 30 1.310387859518559E-4 0.0 0.0 9.560917420012288 0.0 31 1.310387859518559E-4 0.0 0.0 9.74911095643681 0.0 32 1.310387859518559E-4 0.0 0.0 9.938767759304463 0.0 33 1.310387859518559E-4 0.0 0.0 10.125934825239032 0.0 34 1.310387859518559E-4 0.0 0.0 10.323672353240381 0.0 35 1.310387859518559E-4 0.0 0.0 10.5338367261095 0.0 36 1.310387859518559E-4 0.0 0.0 10.736488208584046 0.0 37 1.310387859518559E-4 0.0 0.0 10.946128426309356 0.0 38 1.310387859518559E-4 0.0 0.0 11.162538981308845 0.0 39 1.310387859518559E-4 0.0 0.0 11.373620625679628 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 62065 0.0 44.11907 1 GTTTTTT 69550 0.0 39.681522 2 TTACGAG 165 0.0 39.545452 1 AGGGCGA 5165 0.0 38.596317 6 CGTTAGG 535 0.0 38.271027 2 TACGGGA 1060 0.0 38.207546 4 GTTACGG 605 0.0 37.190083 2 ACGTGCG 135 0.0 36.666664 1 TGTTACG 350 0.0 36.642857 1 ACGGGAC 970 0.0 36.417526 5 TGATTCG 235 0.0 36.38298 15 ACGGGAA 1510 0.0 36.357613 5 GGGCGAT 10155 0.0 36.314625 7 GACCGAT 2680 0.0 36.184704 9 ACGGGAT 1070 0.0 36.168224 5 TGGGCGA 2740 0.0 36.131386 6 TCGCAAG 75 1.8189894E-12 36.000004 1 TTACGGG 1535 0.0 35.912052 3 ACGGGTA 665 0.0 35.86466 5 TTAACGG 580 0.0 35.689655 2 >>END_MODULE