##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547661_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 688026 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.384495644059964 31.0 31.0 33.0 30.0 34.0 2 31.78975794519393 31.0 31.0 34.0 30.0 34.0 3 31.925139456939128 31.0 31.0 34.0 30.0 34.0 4 35.625517058948354 37.0 35.0 37.0 33.0 37.0 5 35.50793720004767 37.0 35.0 37.0 33.0 37.0 6 35.56058637318939 37.0 35.0 37.0 33.0 37.0 7 35.963749916427574 37.0 35.0 37.0 35.0 37.0 8 35.9681843418708 37.0 35.0 37.0 35.0 37.0 9 37.69119044919814 39.0 37.0 39.0 35.0 39.0 10 37.068625313578266 39.0 37.0 39.0 33.0 39.0 11 36.79798292506388 39.0 35.0 39.0 32.0 39.0 12 36.1827183856424 38.0 35.0 39.0 32.0 39.0 13 35.9157226616436 38.0 35.0 39.0 31.0 39.0 14 36.98494388293466 39.0 35.0 41.0 31.0 41.0 15 37.183182030911624 39.0 35.0 41.0 32.0 41.0 16 37.27293445305846 39.0 35.0 41.0 32.0 41.0 17 37.18868909023787 39.0 35.0 41.0 32.0 41.0 18 37.10477365680948 39.0 35.0 41.0 32.0 41.0 19 37.055964454831646 38.0 35.0 41.0 32.0 41.0 20 36.948609500222375 38.0 35.0 41.0 32.0 41.0 21 36.80856537398296 38.0 35.0 41.0 31.0 41.0 22 36.6883475333781 38.0 35.0 41.0 31.0 41.0 23 36.59115207855517 38.0 35.0 40.0 31.0 41.0 24 36.45819780066451 38.0 35.0 40.0 31.0 41.0 25 36.32813004159726 38.0 35.0 40.0 31.0 41.0 26 36.130537218070245 38.0 35.0 40.0 30.0 41.0 27 36.108529328833505 38.0 35.0 40.0 30.0 41.0 28 36.133371413289616 38.0 35.0 40.0 30.0 41.0 29 36.13657478060422 38.0 35.0 40.0 30.0 41.0 30 36.168359916631054 38.0 35.0 40.0 30.0 41.0 31 36.04827288503632 38.0 35.0 40.0 30.0 41.0 32 35.83647274957632 38.0 35.0 40.0 30.0 41.0 33 35.736546293308685 38.0 35.0 40.0 29.0 41.0 34 35.5662954597646 38.0 35.0 40.0 29.0 41.0 35 35.449233023170635 38.0 34.0 40.0 28.0 41.0 36 35.285887451927685 37.0 34.0 40.0 27.0 41.0 37 35.01447619712046 37.0 34.0 40.0 26.0 41.0 38 35.08417850488208 37.0 34.0 40.0 27.0 41.0 39 34.99044367509367 37.0 34.0 40.0 26.0 41.0 40 34.825614148302535 37.0 34.0 40.0 25.0 41.0 41 34.776508445901754 37.0 34.0 40.0 25.0 41.0 42 34.74327132986254 36.0 34.0 40.0 25.0 41.0 43 34.6394729268952 36.0 34.0 40.0 25.0 41.0 44 34.48581012926837 36.0 34.0 40.0 24.0 41.0 45 34.41467182926227 36.0 33.0 40.0 24.0 41.0 46 34.21785949949566 35.0 33.0 40.0 23.0 41.0 47 34.21996261769177 35.0 33.0 40.0 24.0 41.0 48 34.05110998712258 35.0 33.0 40.0 23.0 41.0 49 34.03838081700401 35.0 33.0 40.0 24.0 41.0 50 33.87315159601527 35.0 33.0 39.0 24.0 41.0 51 33.165162363050236 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 5.0 14 8.0 15 30.0 16 80.0 17 179.0 18 367.0 19 712.0 20 1226.0 21 1882.0 22 2842.0 23 4149.0 24 5982.0 25 7878.0 26 10126.0 27 12184.0 28 13512.0 29 15321.0 30 17951.0 31 21368.0 32 26736.0 33 34498.0 34 57214.0 35 89124.0 36 54334.0 37 66763.0 38 93574.0 39 149866.0 40 113.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.13562859543099 24.28323929618939 28.143849215000593 13.43728289337903 2 31.46857822233462 26.202207474717525 28.462005796292583 13.86720850665527 3 29.359646292436626 26.14305273347228 30.498702083932876 13.99859889015822 4 25.69321508198818 29.066343423068314 30.02110385363344 15.219337641310066 5 23.424114786359816 33.187263272027515 28.428722170383097 14.959899771229576 6 21.79699604375416 41.74260856421124 25.5782484964231 10.882146895611502 7 87.52808760134064 4.519305956460948 6.181597788455669 1.7710086537427365 8 87.98955272039139 3.701458956492923 5.739172647545296 2.5698156755704 9 82.11114114873565 5.941054553170956 8.487905980297256 3.4598983177961298 10 47.51666361445643 23.766979736230898 14.749587951618107 13.966768697694565 11 39.68890710525474 24.547473496641114 19.961745631705778 15.801873766398364 12 34.67848598744815 22.11369919160032 25.41037693342984 17.797437887521692 13 22.241019961454946 33.87633606869508 26.621523023839217 17.26112094601076 14 18.79492926139419 35.276137820373066 27.851418405699786 18.077514512532957 15 18.313261417446434 23.730643900085173 40.2913552685509 17.664739413917495 16 19.812623360163713 20.370451116672918 39.462462174394574 20.354463348768796 17 19.70492394182778 22.078671445555837 28.261868010801916 29.954536601814468 18 24.467970687154263 23.216564490295426 30.413094853973544 21.902369968576767 19 28.510841160072438 26.0740146447954 24.412885559557342 21.00225863557482 20 30.787353966274527 23.33981564650173 23.894009819396363 21.978820567827377 21 25.21416341824291 27.57541139433684 25.288724554013946 21.921700633406296 22 25.14643341966728 24.464482446884276 25.110678956899886 25.278405176548564 23 23.600997636717217 28.75719812914047 24.15504646626726 23.48675776787505 24 23.12441680982986 24.886704862897624 32.260554106966886 19.72832422030563 25 21.668803213832035 25.77824093856918 29.833610939121485 22.719344908477296 26 21.066645737225045 30.86729280579513 26.11238528776529 21.953676169214535 27 22.418920215224425 29.140468528805595 26.78081932950208 21.659791926467893 28 20.37423004363207 28.138180824561864 32.01143561435178 19.476153517454282 29 20.759680593465944 25.62810126361504 30.806539287759477 22.805678855159545 30 22.62923203483589 27.392133436817794 28.508515666559113 21.4701188617872 31 27.815082569554058 26.434756826050176 23.521640170574948 22.228520433820815 32 28.537148305441946 26.716141541162692 24.870717094993502 19.875993058401864 33 26.33141770805173 27.41001066820149 23.96639080499865 22.29218081874813 34 22.272414123884854 28.369712772482437 26.766139651699213 22.5917334519335 35 22.587809181629765 26.855380465273115 28.29587835343432 22.2609319996628 36 28.353288974544565 26.47690639597922 25.054867112580048 20.114937516896163 37 23.205082366073377 29.790007935746615 27.116707798833183 19.88820189934683 38 22.98154430210486 29.587980686776373 25.10733605997448 22.32313895114429 39 23.415975559063178 28.575809635101002 26.296825992041 21.711388813794827 40 24.885978146174708 26.04959696290547 25.91239284561921 23.152032045300615 41 19.713644542502752 25.450201009845557 27.285596765238523 27.550557682413164 42 23.89851546307843 26.4966730908425 24.58003040582769 25.024781040251387 43 23.94749617020287 25.761962483975896 26.83343362024109 23.457107725580137 44 23.123690093106948 28.891059349501326 26.09363599631409 21.89161456107763 45 21.383784915104954 30.460476784307573 24.102577518872835 24.053160781714645 46 23.96639080499865 28.887425765886753 25.336978544415473 21.809204884699124 47 23.979762392700277 26.468040451959663 26.671230447686572 22.880966707653492 48 24.86010703083895 23.867121300648524 27.9932735100127 23.279498158499823 49 22.848409798466918 24.78874344864874 28.103007735172795 24.259839017711542 50 21.28466075409941 29.030007586922586 27.289957065576008 22.395374593401993 51 21.362564786795847 29.782014051794555 24.438029958170183 24.417391203239415 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 522.0 1 659.5 2 797.0 3 2829.0 4 4861.0 5 3568.5 6 2276.0 7 2403.0 8 2530.0 9 2735.5 10 2941.0 11 3171.5 12 3402.0 13 3344.5 14 3287.0 15 3274.0 16 3261.0 17 3157.0 18 3053.0 19 3099.0 20 3145.0 21 3224.0 22 3303.0 23 3328.0 24 3353.0 25 3428.5 26 4047.0 27 4590.0 28 5600.5 29 6611.0 30 7660.0 31 8709.0 32 9982.0 33 11255.0 34 12358.5 35 13462.0 36 15216.5 37 16971.0 38 19561.5 39 22152.0 40 28881.5 41 35611.0 42 43610.0 43 51609.0 44 55878.5 45 60148.0 46 58535.5 47 56923.0 48 53680.5 49 50438.0 50 49575.0 51 48712.0 52 46160.0 53 43608.0 54 40843.5 55 38079.0 56 36155.0 57 34231.0 58 33373.0 59 32515.0 60 30309.5 61 28104.0 62 25650.0 63 23196.0 64 20320.5 65 17445.0 66 14938.5 67 12432.0 68 11137.5 69 9843.0 70 8743.5 71 7644.0 72 6318.0 73 4992.0 74 4287.0 75 2964.0 76 2346.0 77 1844.5 78 1343.0 79 968.5 80 594.0 81 486.5 82 379.0 83 250.0 84 121.0 85 93.5 86 66.0 87 58.5 88 51.0 89 37.0 90 23.0 91 12.5 92 2.0 93 2.5 94 3.0 95 1.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 688026.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.826732756276133 #Duplication Level Percentage of deduplicated Percentage of total 1 75.4608144144801 20.998279162826876 2 5.964540884083357 3.3194737039054116 3 2.579562372625146 2.1534237831355663 4 1.7839262408764192 1.985633550471056 5 1.3223375415445817 1.8398166691076134 6 1.0621991933770356 1.7734519852820911 7 0.9018257999078745 1.7566405868725967 8 0.7976781886250968 1.7757422224304795 9 0.7107648678693212 1.7800437627674568 >10 9.059300801650405 55.1300526240872 >50 0.33184618708109553 5.702261624511232 >100 0.024153361717919136 1.2306902827079584 >500 5.25073080824329E-4 0.13339905355720835 >1k 5.25073080824329E-4 0.4210909883372119 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2882 0.4188795190879414 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 913 0.13269847360419518 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.028051265504501283 0.0 2 0.0 0.0 0.0 0.10726338830218625 0.0 3 0.0 0.0 0.0 0.17659216366823347 0.0 4 0.0 0.0 0.0 0.33501640926360343 0.0 5 0.0 0.0 0.0 0.5739608677579044 0.0 6 0.0 0.0 0.0 1.1703046105815769 0.0 7 0.0 0.0 0.0 1.4483464287686802 0.0 8 0.0 0.0 0.0 2.223171798740164 0.0 9 0.0 0.0 0.0 2.624900803167322 0.0 10 0.0 0.0 0.0 3.1895596968719206 0.0 11 0.0 0.0 0.0 3.5728300965370496 0.0 12 0.0 0.0 0.0 3.902759488740251 0.0 13 0.0 0.0 0.0 4.076735472205992 0.0 14 0.0 0.0 0.0 4.156674311726592 0.0 15 0.0 0.0 0.0 4.235014374456779 0.0 16 0.0 0.0 0.0 4.3707650582972155 0.0 17 0.0 0.0 0.0 4.501283381732667 0.0 18 0.0 0.0 0.0 4.71232191806705 0.0 19 0.0 0.0 0.0 4.804469598532614 0.0 20 1.453433445829082E-4 0.0 0.0 4.904029789571906 0.0 21 1.453433445829082E-4 0.0 0.0 5.026844915744463 0.0 22 1.453433445829082E-4 0.0 0.0 5.172914977050286 0.0 23 1.453433445829082E-4 0.0 0.0 5.3202931284573545 0.0 24 1.453433445829082E-4 0.0 0.0 5.453136945406133 0.0 25 1.453433445829082E-4 0.0 0.0 5.565487350768721 0.0 26 1.453433445829082E-4 0.0 0.0 5.672460052381742 0.0 27 1.453433445829082E-4 0.0 0.0 5.769113376529376 0.0 28 1.453433445829082E-4 0.0 0.0 5.8808824085136315 0.0 29 1.453433445829082E-4 0.0 0.0 5.999046547659536 0.0 30 1.453433445829082E-4 0.0 0.0 6.15369186629575 0.0 31 1.453433445829082E-4 0.0 0.0 6.2831927863191215 0.0 32 1.453433445829082E-4 0.0 0.0 6.425774607354954 0.0 33 1.453433445829082E-4 0.0 0.0 6.553240720554165 0.0 34 1.453433445829082E-4 0.0 0.0 6.675038443314643 0.0 35 1.453433445829082E-4 0.0 0.0 6.8168935476275605 0.0 36 1.453433445829082E-4 0.0 0.0 6.941743480624279 0.0 37 1.453433445829082E-4 0.0 0.0 7.0750233276068055 0.0 38 1.453433445829082E-4 0.0 0.0 7.227924526108025 0.0 39 1.453433445829082E-4 0.0 0.0 7.364692613360542 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 30 2.1642263E-6 45.000004 1 TATCTCG 25 3.8891667E-5 45.000004 1 GCGTATG 25 3.8891667E-5 45.000004 1 AATACCG 25 3.8891667E-5 45.000004 1 TGCGTAG 25 3.8891667E-5 45.000004 1 CGGGTAT 45 3.8380676E-10 45.0 6 CGTTCGA 35 1.210974E-7 45.0 14 ACGGGTA 35 1.210974E-7 45.0 5 TAGTCGG 35 1.210974E-7 45.0 2 CATACGA 120 0.0 43.125004 18 ACATACG 125 0.0 41.399998 17 CGTATGG 60 3.6379788E-12 41.250004 2 AGCAACG 170 0.0 41.02941 10 TACGGGA 160 0.0 40.78125 4 CGGCTAC 135 0.0 40.000004 25 AAGTACG 45 1.9263098E-8 40.0 1 TCGTAAG 45 1.9263098E-8 40.0 1 GCGATCT 85 0.0 39.705883 9 GTTCGAA 40 3.455516E-7 39.375 15 GGCGATA 315 0.0 39.285713 8 >>END_MODULE