##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547658_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2405682 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.491127671903435 31.0 31.0 33.0 30.0 34.0 2 31.912036171031748 31.0 31.0 34.0 30.0 34.0 3 31.95788512363646 31.0 31.0 34.0 30.0 34.0 4 35.70785914347782 37.0 35.0 37.0 33.0 37.0 5 35.626293500138424 37.0 35.0 37.0 33.0 37.0 6 35.67970330243149 37.0 35.0 37.0 33.0 37.0 7 36.05428273562341 37.0 35.0 37.0 35.0 37.0 8 36.06441042498551 37.0 35.0 37.0 35.0 37.0 9 37.811209045917124 39.0 38.0 39.0 35.0 39.0 10 37.2382800386751 39.0 37.0 39.0 34.0 39.0 11 37.01585122223137 39.0 37.0 39.0 33.0 39.0 12 36.69103688683708 39.0 35.0 39.0 32.0 39.0 13 36.615085451859386 39.0 35.0 39.0 32.0 39.0 14 37.768204608921714 40.0 36.0 41.0 33.0 41.0 15 37.844962468023624 40.0 36.0 41.0 33.0 41.0 16 37.86311781856455 40.0 36.0 41.0 33.0 41.0 17 37.75992920095008 40.0 36.0 41.0 33.0 41.0 18 37.52195427325806 39.0 36.0 41.0 32.0 41.0 19 37.369363864384404 39.0 36.0 41.0 32.0 41.0 20 37.15751125876155 39.0 35.0 41.0 32.0 41.0 21 37.04791406345477 39.0 35.0 41.0 32.0 41.0 22 36.96357373917251 38.0 35.0 41.0 32.0 41.0 23 36.84673784814452 38.0 35.0 41.0 32.0 41.0 24 36.70547354139076 38.0 35.0 40.0 31.0 41.0 25 36.580115326963416 38.0 35.0 40.0 31.0 41.0 26 36.41914891494387 38.0 35.0 40.0 31.0 41.0 27 36.367741039755046 38.0 35.0 40.0 31.0 41.0 28 36.35225935930019 38.0 35.0 40.0 31.0 41.0 29 36.237528484645935 38.0 35.0 40.0 30.0 41.0 30 36.19067399598118 38.0 35.0 40.0 30.0 41.0 31 35.988075315025014 38.0 35.0 40.0 30.0 41.0 32 35.62135145044108 38.0 35.0 40.0 28.0 41.0 33 35.21802964814136 38.0 34.0 40.0 25.0 41.0 34 34.73944685955999 38.0 34.0 40.0 23.0 41.0 35 34.425171323558146 38.0 34.0 40.0 21.0 41.0 36 34.23242972263167 38.0 33.0 40.0 20.0 41.0 37 33.979216704452206 37.0 33.0 40.0 18.0 41.0 38 34.00386418487564 37.0 33.0 40.0 18.0 41.0 39 33.86684690661526 37.0 33.0 40.0 18.0 41.0 40 33.72987867889439 37.0 33.0 40.0 18.0 41.0 41 33.62979437847562 37.0 33.0 40.0 18.0 41.0 42 33.56094654239421 37.0 33.0 40.0 17.0 41.0 43 33.46857730988551 36.0 33.0 40.0 17.0 41.0 44 33.30485325990717 36.0 33.0 40.0 16.0 41.0 45 33.23199408733158 36.0 33.0 40.0 17.0 41.0 46 33.04375765375474 35.0 32.0 40.0 15.0 41.0 47 33.04988065754327 35.0 32.0 40.0 16.0 41.0 48 32.87336148335483 35.0 32.0 40.0 15.0 41.0 49 32.826997915767755 35.0 32.0 40.0 15.0 41.0 50 32.71565693221299 35.0 32.0 40.0 15.0 41.0 51 32.05566737415835 35.0 31.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 4.0 13 11.0 14 41.0 15 90.0 16 247.0 17 527.0 18 1320.0 19 2657.0 20 4587.0 21 7351.0 22 11466.0 23 17483.0 24 27123.0 25 42453.0 26 60390.0 27 66070.0 28 61570.0 29 58171.0 30 61455.0 31 70551.0 32 84553.0 33 107172.0 34 165458.0 35 229844.0 36 205449.0 37 249646.0 38 339317.0 39 530351.0 40 321.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.33980301635877 22.236604838045928 25.791438768715068 20.632153376880236 2 38.474079283961885 23.618583004736287 25.42189699220429 12.485440719097536 3 27.135548256170182 24.029817739834275 36.00567323528214 12.828960768713404 4 23.69864346160465 26.781345165321103 35.429079986465375 14.09093138660887 5 21.61748726556544 30.043039770011166 34.42711879624988 13.912354168173517 6 20.214267721170128 38.425943246031686 31.565477066378683 9.794311966419501 7 81.2313098738736 3.6455774287707188 13.49280578231038 1.630306915045297 8 81.16758574075875 3.3815774487234807 13.454604557044531 1.9962322534732353 9 75.81126682578994 5.5038862160501685 15.458734778744656 3.2261121794152343 10 38.79082937811398 25.100283412354585 22.757953877528287 13.350933332003148 11 30.604585310943012 25.938340977735212 27.821923263340707 15.635150447981072 12 26.25716948457859 22.808750283703333 33.302406552486985 17.631673679231085 13 22.39963552955046 25.824776508283303 34.323946390254406 17.451641571911832 14 20.29328897169285 27.674314394005524 34.2105481938178 17.82184844048382 15 19.80020634481199 23.927435130661493 38.85056295886156 17.421795565664954 16 22.100011555974564 22.580997820992135 37.45607274776965 17.862917875263644 17 22.163901962104717 23.227633577505255 33.24030358127134 21.368160879118687 18 23.992198470121988 23.47093256714728 33.99460111519311 18.542267847537623 19 25.680950350046267 25.57557482659803 30.45589566700836 18.28757915634735 20 27.26233143033867 24.307161129359574 30.214300975773188 18.21620646452856 21 24.81919887998497 25.544523340990207 31.351649968699103 18.28462781032572 22 24.297392589710526 23.9334209592124 31.297819079994778 20.471367371082298 23 22.557511757580595 26.338476989061732 30.818453976876413 20.285557276481264 24 22.370288342349486 25.11329427580204 33.665172703624165 18.851244678224305 25 22.06833654655935 25.89178453345039 32.272553063954426 19.767325856035836 26 20.80790395405544 27.39767766479526 31.358550298834174 20.43586808231512 27 20.921385286999694 26.24519782747678 32.23559888630334 20.59781799922018 28 20.719779255944886 26.883145818940324 33.6976790781159 18.699395846998897 29 21.753373887321768 24.99802550794328 33.33657565713174 19.912024947603214 30 22.304070114005093 25.332982497271043 33.39306691408092 18.96988047464295 31 24.58949270934396 25.732578121297827 30.162714772775455 19.515214396582756 32 24.941201704963497 26.050367421795567 30.014482379632884 18.99394849360805 33 24.41661034168273 26.60692477226832 29.184987874540358 19.791477011508587 34 22.577298246401647 27.65934982262826 30.425135159177312 19.33821677179278 35 22.990154143398836 27.745229835032227 29.32469877564865 19.939917245920284 36 24.77330752776136 28.411236397828144 27.320693258710005 19.494762815700494 37 23.646392166545706 28.64023590815411 28.154427725692756 19.558944199607428 38 23.637205582450214 28.942062999182767 27.24420767167065 20.17652374669636 39 23.394280707092623 28.796324701269743 26.7600206511085 21.049373940529133 40 24.273033592968645 27.188589348051824 27.576836838784182 20.961540220195353 41 21.680587874872906 27.45674615348163 27.953237377176205 22.90942859446926 42 23.00337284811542 28.278966214154654 26.709182676679628 22.008478261050296 43 22.998343089402507 27.117008814963906 27.8555104124319 22.029137683201686 44 22.63345695732021 28.40283961055534 27.69501538441074 21.268688047713706 45 21.615990808427714 29.17085466823961 27.31977875712584 21.893375766206837 46 23.02823066390321 28.72037950153013 27.200935119438064 21.0504547151286 47 22.356071999541086 28.648092308127175 28.128156589274894 20.867679103056847 48 23.040451730527973 27.313959201590237 28.534694111690573 21.110894956191217 49 22.588355401919287 27.054282319940874 28.371330874155436 21.9860314039844 50 21.672315792361584 28.323984633047928 28.634582625633815 21.36911694895668 51 21.388570891747122 28.955697386437606 27.553392343626466 22.102339378188805 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1746.0 1 2363.0 2 2980.0 3 31241.5 4 59503.0 5 41121.5 6 22740.0 7 23716.5 8 24693.0 9 26378.0 10 28063.0 11 29454.0 12 30845.0 13 31255.0 14 31665.0 15 30748.0 16 29831.0 17 28453.0 18 27075.0 19 25665.0 20 24255.0 21 23361.0 22 22467.0 23 21651.5 24 20836.0 25 20783.0 26 22805.0 27 24880.0 28 26361.5 29 27843.0 30 31634.5 31 35426.0 32 38965.0 33 42504.0 34 49480.0 35 56456.0 36 61072.5 37 65689.0 38 72998.5 39 80308.0 40 90624.0 41 100940.0 42 111516.5 43 122093.0 44 127345.0 45 132597.0 46 137129.5 47 141662.0 48 148114.5 49 154567.0 50 158084.0 51 161601.0 52 157554.0 53 153507.0 54 143856.0 55 134205.0 56 123865.0 57 113525.0 58 111529.5 59 109534.0 60 102254.5 61 94975.0 62 88832.0 63 82689.0 64 73727.0 65 64765.0 66 56904.5 67 49044.0 68 41955.5 69 34867.0 70 30375.5 71 25884.0 72 21714.0 73 17544.0 74 15427.0 75 11100.5 76 8891.0 77 6786.5 78 4682.0 79 3528.5 80 2375.0 81 1692.0 82 1009.0 83 785.0 84 561.0 85 349.5 86 138.0 87 118.0 88 98.0 89 68.0 90 38.0 91 31.0 92 24.0 93 20.0 94 16.0 95 10.5 96 5.0 97 3.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2405682.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.558614501342312 #Duplication Level Percentage of deduplicated Percentage of total 1 76.55701936576132 22.629194228043364 2 6.86195340949187 4.056596711146835 3 3.1056342579543363 2.7539473743910357 4 1.760777989494945 2.0818463125571856 5 1.271246999290487 1.8788149994007846 6 0.9847428865160742 1.7464581219280633 7 0.7978170366669513 1.6507656360609186 8 0.659596506374022 1.5597407086673516 9 0.5872511254866976 1.5622496670366628 >10 6.766500100629156 44.37651836947574 >50 0.5925180270599656 11.233515471275043 >100 0.052807790657093706 2.360732819194212 >500 0.0015653033858534227 0.3016686598277685 >1k 4.2690092341456977E-4 0.16294818574634348 >5k 0.0 0.0 >10k+ 1.423003078048566E-4 1.6450027352487728 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 39109 1.6256928388706404 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02814170784002208 0.0 2 0.0 0.0 0.0 0.08866508541029114 0.0 3 0.0 0.0 0.0 0.16993102163960158 0.0 4 0.0 0.0 0.0 0.24130371345838728 0.0 5 0.0 0.0 0.0 0.38176284313554326 0.0 6 0.0 0.0 0.0 0.7735436354430885 0.0 7 0.0 0.0 0.0 0.9987188664170908 0.0 8 0.0 0.0 0.0 1.504853924999231 0.0 9 4.156825382573424E-5 0.0 0.0 1.887281860195986 0.0 10 8.313650765146848E-5 0.0 0.0 2.3876804997501746 0.0 11 8.313650765146848E-5 0.0 0.0 2.715820295450521 0.0 12 8.313650765146848E-5 0.0 0.0 3.0134074245889524 0.0 13 8.313650765146848E-5 0.0 0.0 3.242739480945528 0.0 14 8.313650765146848E-5 0.0 0.0 3.3854848645830997 0.0 15 8.313650765146848E-5 0.0 0.0 3.4845004451959984 0.0 16 8.313650765146848E-5 0.0 0.0 3.604217016214113 0.0 17 8.313650765146848E-5 0.0 0.0 3.717033257097156 0.0 18 8.313650765146848E-5 0.0 0.0 3.8858003676296367 0.0 19 8.313650765146848E-5 0.0 0.0 3.9825296942821202 0.0 20 1.6627301530293696E-4 0.0 0.0 4.086491897100282 0.0 21 1.6627301530293696E-4 0.0 0.0 4.195068176093099 0.0 22 2.078412691286712E-4 0.0 0.0 4.307260893168756 0.0 23 2.078412691286712E-4 0.0 0.0 4.430510765762058 0.0 24 2.078412691286712E-4 0.0 0.0 4.549645381226613 0.0 25 2.078412691286712E-4 0.0 0.0 4.651778580876441 0.0 26 2.078412691286712E-4 0.0 0.0 4.75129298053525 0.0 27 2.078412691286712E-4 0.0 0.0 4.868764865846774 0.0 28 2.078412691286712E-4 0.0 0.0 4.975470573417434 0.0 29 2.078412691286712E-4 0.0 0.0 5.0860421285938875 0.0 30 2.4940952295440544E-4 0.0 0.0 5.235355296335925 0.0 31 2.4940952295440544E-4 0.0 0.0 5.357358121314455 0.0 32 2.4940952295440544E-4 0.0 0.0 5.505673650964675 0.0 33 2.4940952295440544E-4 0.0 0.0 5.6253070854751375 0.0 34 2.4940952295440544E-4 0.0 0.0 5.751092621551809 0.0 35 2.4940952295440544E-4 0.0 0.0 5.885981605216317 0.0 36 2.4940952295440544E-4 0.0 0.0 6.0160902396908655 0.0 37 2.4940952295440544E-4 0.0 0.0 6.148069445587572 0.0 38 2.4940952295440544E-4 0.0 0.0 6.297299476821958 0.0 39 2.4940952295440544E-4 0.0 0.0 6.481613114285263 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATGCG 70 0.0 45.0 1 CGTTTTT 26165 0.0 43.38334 1 TCTAGCG 130 0.0 39.807693 1 GTTTTTT 30155 0.0 38.329468 2 TTCGTAG 90 0.0 37.500004 1 GTATGCG 90 0.0 37.500004 1 TTACGCG 60 1.5643309E-10 37.499996 1 TATGGGC 950 0.0 37.42105 4 AGGGCGA 3070 0.0 37.30456 6 GGGCGAT 5910 0.0 36.73858 7 TATCGCG 105 0.0 36.42857 1 TCGCGAT 25 0.002107566 35.999996 22 GGCGATT 1585 0.0 35.77287 8 TTACGGG 775 0.0 35.70968 3 GCGATAT 300 0.0 35.25 9 ACGGGTA 390 0.0 35.192307 5 TACGGGA 570 0.0 35.13158 4 CGTAGGT 45 8.705174E-7 35.000004 3 ATACTAT 1245 0.0 34.879517 45 AAGGGCG 1130 0.0 34.64602 5 >>END_MODULE