##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547657_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2949680 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.401215047055953 31.0 31.0 33.0 30.0 34.0 2 31.81354079086545 31.0 31.0 34.0 30.0 34.0 3 31.964688033956225 31.0 31.0 34.0 30.0 34.0 4 35.662846817281874 37.0 35.0 37.0 33.0 37.0 5 35.54116446529793 37.0 35.0 37.0 33.0 37.0 6 35.5879532695072 37.0 35.0 37.0 33.0 37.0 7 35.986653467494776 37.0 35.0 37.0 35.0 37.0 8 35.9976366927938 37.0 35.0 37.0 35.0 37.0 9 37.74764415122996 39.0 37.0 39.0 35.0 39.0 10 37.116701472702125 39.0 37.0 39.0 33.0 39.0 11 36.857438773019446 39.0 37.0 39.0 32.0 39.0 12 36.38906389845678 38.0 35.0 39.0 32.0 39.0 13 36.21171618616257 39.0 35.0 39.0 32.0 39.0 14 37.26807450299694 39.0 35.0 41.0 32.0 41.0 15 37.41798161156464 39.0 35.0 41.0 32.0 41.0 16 37.48097725855008 39.0 35.0 41.0 32.0 41.0 17 37.392387648829704 39.0 35.0 41.0 32.0 41.0 18 37.281184399663694 39.0 35.0 41.0 32.0 41.0 19 37.25146287054867 39.0 35.0 41.0 32.0 41.0 20 37.15841616717746 39.0 35.0 41.0 32.0 41.0 21 37.04848525941797 39.0 35.0 41.0 32.0 41.0 22 36.94888292967373 39.0 35.0 41.0 31.0 41.0 23 36.84798859537306 38.0 35.0 41.0 31.0 41.0 24 36.728579710341464 38.0 35.0 41.0 31.0 41.0 25 36.58713012936997 38.0 35.0 40.0 31.0 41.0 26 36.418571506061674 38.0 35.0 40.0 31.0 41.0 27 36.392694122752296 38.0 35.0 40.0 30.0 41.0 28 36.40677870141846 38.0 35.0 40.0 30.0 41.0 29 36.394864866697404 38.0 35.0 41.0 30.0 41.0 30 36.40228363754712 38.0 35.0 40.0 30.0 41.0 31 36.28660668275881 38.0 35.0 41.0 30.0 41.0 32 36.09638401453717 38.0 35.0 41.0 30.0 41.0 33 35.98686637194543 38.0 35.0 41.0 30.0 41.0 34 35.77872921808467 38.0 35.0 40.0 29.0 41.0 35 35.68167767351035 38.0 35.0 40.0 28.0 41.0 36 35.53269202082938 38.0 35.0 40.0 27.0 41.0 37 35.290147066800465 38.0 34.0 40.0 26.0 41.0 38 35.34957893737626 38.0 34.0 40.0 27.0 41.0 39 35.23831703778037 38.0 34.0 40.0 26.0 41.0 40 35.09749464348675 38.0 34.0 40.0 26.0 41.0 41 35.04012977678935 37.0 34.0 40.0 26.0 41.0 42 34.99548256082016 37.0 34.0 40.0 26.0 41.0 43 34.91152192780234 37.0 34.0 40.0 26.0 41.0 44 34.75221244338369 37.0 34.0 40.0 25.0 41.0 45 34.68226349976947 37.0 34.0 40.0 25.0 41.0 46 34.49817675137642 36.0 34.0 40.0 24.0 41.0 47 34.51488398741559 36.0 33.0 40.0 24.0 41.0 48 34.338862859700036 36.0 33.0 40.0 24.0 41.0 49 34.30944271921022 36.0 33.0 40.0 24.0 41.0 50 34.16178534620705 36.0 33.0 40.0 24.0 41.0 51 33.45931660383499 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 4.0 12 5.0 13 15.0 14 43.0 15 111.0 16 255.0 17 658.0 18 1384.0 19 2734.0 20 4711.0 21 7479.0 22 11357.0 23 16533.0 24 23528.0 25 32597.0 26 42293.0 27 50115.0 28 56300.0 29 64168.0 30 74544.0 31 89411.0 32 109352.0 33 140269.0 34 223639.0 35 323685.0 36 233797.0 37 297384.0 38 430514.0 39 712427.0 40 365.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.37795964307993 23.81261696183993 28.577642320522905 14.23178107455724 2 31.118663719454315 25.49683355482629 29.446482330286678 13.938020395432723 3 28.94419055626373 26.134936671096526 30.880163271948142 14.0407095006916 4 25.431470532396734 28.73142171354181 30.681497653982802 15.155610100078654 5 23.087589162214208 32.73748338802853 29.534966504841204 14.639960944916059 6 21.61939600227821 41.3059382712701 26.413475360039058 10.661190366412628 7 88.22177320929728 3.7577296520300507 6.342043882726261 1.6784532559464078 8 88.67704293347074 3.13776409644436 5.927897263431965 2.257295706652925 9 83.12437281332213 4.9603346803721085 8.610188223807329 3.3051042824984402 10 43.99534864798893 25.668920018442677 15.346613869979118 14.989117463589272 11 35.37041306175585 24.787095549347725 23.5034308806379 16.339060508258523 12 31.282240785441136 22.90536600580402 26.66590952238887 19.14648368636598 13 23.511296140598304 29.41234303382062 28.458680263621815 18.61768056195926 14 20.51734425429199 31.078523772070188 29.437566108866047 18.966565864771773 15 19.87168099590464 23.991382116026145 37.71168397927911 18.425252908790107 16 22.447350221040928 21.800534295245587 36.185484527135145 19.56663095657834 17 22.85213989314095 22.440230804697457 28.569878766510264 26.137750535651328 18 25.49137533562963 22.789794147161725 30.22965203005072 21.48917848715793 19 27.23942936182908 25.70248298120474 25.916234981421717 21.141852675544463 20 29.22744162078598 24.614161536166634 25.29037048086572 20.86802636218166 21 26.245660546228745 26.440122318353176 26.88925578367823 20.42496135173985 22 25.62688156003363 23.588016327194815 27.199289414444955 23.585812698326595 23 23.728709554934774 27.15077567736161 26.07526918174175 23.04524558596187 24 23.66487212172168 24.995457134333215 31.126664587345065 20.213006156600038 25 22.738432643540996 25.531074557240107 29.467840579317077 22.26265221990182 26 21.673062840714923 28.924696916275668 27.06764801605598 22.334592226953433 27 22.18491497382767 27.06958042906349 28.133390740690515 22.612113856418322 28 20.95067939573106 27.06893629139432 31.44161400558705 20.53877030728757 29 22.09575275962138 24.974268395215752 30.432453689891787 22.49752515527108 30 22.900145100485474 26.041774022944864 29.744277345339153 21.31380353123051 31 26.70109978031515 26.27932521493857 25.751878169835372 21.267696834910907 32 27.30096146022619 25.8774850153237 25.45201513384503 21.369538390605083 33 26.072828238995417 26.4186962653576 25.1546269425836 22.353848553063383 34 22.769927585365192 27.94370914811098 27.358221908817228 21.9281413577066 35 22.961473786987064 27.29743565403705 27.81098288627919 21.9301076726967 36 26.681233218518617 27.177490439640913 25.690617287298963 20.45065905454151 37 23.719250901792737 27.97340728485802 26.54779501505248 21.759546798296764 38 23.930019527541972 28.609849203981447 25.439403596322315 22.020727672154266 39 23.190922405142253 27.558107998155734 25.65603726505926 23.594932331642752 40 24.585616066827587 26.2145724281956 26.263018361313765 22.936793143663042 41 21.465887825120014 25.114520897182068 27.192678527840307 26.22691274985761 42 24.248291340077568 26.387574245341867 25.277826747308186 24.086307667272383 43 23.59069458381926 25.66641127173117 26.822638387892923 23.920255756556642 44 22.802439586667028 27.693648124542324 26.735442488676735 22.768469800113913 45 21.71940685091264 28.872657373003175 25.67695478831602 23.730980987768167 46 23.76895120826666 27.725007458436167 26.22247159013859 22.28356974315858 47 22.89183911475143 27.172133926392018 27.280823682568954 22.655203276287597 48 24.12404057389276 25.600777033440913 27.66225488866589 22.612927504000435 49 23.16705540940034 24.73814108649074 28.170445607659133 23.924357896449784 50 22.201120121504704 27.890415231482734 27.446367063545875 22.46209758346668 51 21.62621030077839 28.65402348729354 25.65603726505926 24.063728946868814 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1759.0 1 2389.0 2 3019.0 3 14544.0 4 26069.0 5 18358.0 6 10647.0 7 11346.0 8 12045.0 9 12871.0 10 13697.0 11 13893.0 12 14089.0 13 14328.5 14 14568.0 15 14450.0 16 14332.0 17 13615.5 18 12899.0 19 12414.5 20 11930.0 21 12557.5 22 13185.0 23 14306.5 24 15428.0 25 15836.5 26 18392.5 27 20540.0 28 24684.0 29 28828.0 30 32597.0 31 36366.0 32 44594.5 33 52823.0 34 58890.0 35 64957.0 36 75004.5 37 85052.0 38 91552.5 39 98053.0 40 122192.0 41 146331.0 42 165873.5 43 185416.0 44 193204.0 45 200992.0 46 204613.5 47 208235.0 48 217349.0 49 226463.0 50 229815.0 51 233167.0 52 226926.5 53 220686.0 54 205007.0 55 189328.0 56 175164.0 57 161000.0 58 151215.5 59 141431.0 60 132026.5 61 122622.0 62 112650.0 63 102678.0 64 87887.5 65 73097.0 66 64628.0 67 56159.0 68 46621.0 69 37083.0 70 31740.0 71 26397.0 72 23026.5 73 19656.0 74 17173.5 75 11482.5 76 8274.0 77 6368.0 78 4462.0 79 3528.0 80 2594.0 81 2004.5 82 1415.0 83 999.5 84 584.0 85 404.0 86 224.0 87 154.0 88 84.0 89 73.0 90 62.0 91 34.5 92 7.0 93 7.5 94 8.0 95 4.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2949680.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.263746117956984 #Duplication Level Percentage of deduplicated Percentage of total 1 79.74778966038764 16.1598896314633 2 6.204382470311696 2.5144806239419797 3 2.2249421085764673 1.3525698604603624 4 1.1827273967608594 0.9586595077885691 5 0.821392426239748 0.832224379426748 6 0.588260259167564 0.7152213925833056 7 0.46140931847089606 0.6544916900167657 8 0.40713275369116597 0.6600027805682 9 0.3452565493933965 0.6296571956222695 >10 5.208576363321715 26.139045657211728 >50 2.1378850430820604 31.01792024980115 >100 0.6678629460840282 17.379356186353604 >500 0.0013615454358808204 0.1767140207160167 >1k 8.509658974255127E-4 0.2707269833373792 >5k 0.0 0.0 >10k+ 1.7019317948510255E-4 0.5390398407086926 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15630 0.5298879878495294 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0170594776382523E-4 0.0 0.0 0.022477014455805376 0.0 2 1.0170594776382523E-4 0.0 0.0 0.07665238263133628 0.0 3 1.0170594776382523E-4 0.0 0.0 0.12781047435654036 0.0 4 1.0170594776382523E-4 0.0 0.0 0.2576211656857693 0.0 5 1.0170594776382523E-4 0.0 0.0 0.4323180819614331 0.0 6 1.0170594776382523E-4 0.0 0.0 0.957866616039706 0.0 7 1.0170594776382523E-4 0.0 0.0 1.219115293862385 0.0 8 1.0170594776382523E-4 0.0 0.0 1.950584470179816 0.0 9 1.0170594776382523E-4 0.0 0.0 2.3540180629763228 0.0 10 1.0170594776382523E-4 0.0 0.0 2.886889425293591 0.0 11 1.0170594776382523E-4 0.0 0.0 3.218213501125546 0.0 12 1.0170594776382523E-4 0.0 0.0 3.500854329961216 0.0 13 1.0170594776382523E-4 0.0 0.0 3.6716864202218544 0.0 14 1.0170594776382523E-4 0.0 0.0 3.761085948306257 0.0 15 1.0170594776382523E-4 0.0 0.0 3.829805267012015 0.0 16 1.0170594776382523E-4 0.0 0.0 3.9365965121640314 0.0 17 1.0170594776382523E-4 0.0 0.0 4.045625288166852 0.0 18 1.0170594776382523E-4 0.0 0.0 4.211914512760706 0.0 19 1.0170594776382523E-4 0.0 0.0 4.296635567247972 0.0 20 1.0170594776382523E-4 0.0 0.0 4.389391391608581 0.0 21 1.0170594776382523E-4 0.0 0.0 4.493877301944618 0.0 22 1.3560793035176697E-4 0.0 0.0 4.608330395161509 0.0 23 1.3560793035176697E-4 0.0 0.0 4.738988636055437 0.0 24 1.3560793035176697E-4 0.0 0.0 4.846525724824388 0.0 25 1.3560793035176697E-4 0.0 0.0 4.939790078923815 0.0 26 1.6950991293970873E-4 0.0 0.0 5.032715413197364 0.0 27 1.6950991293970873E-4 0.0 0.0 5.130590436928752 0.0 28 1.6950991293970873E-4 0.0 0.0 5.22927910824225 0.0 29 1.6950991293970873E-4 0.0 0.0 5.34013859130482 0.0 30 1.6950991293970873E-4 0.0 0.0 5.501512028423422 0.0 31 1.6950991293970873E-4 0.0 0.0 5.624576225217651 0.0 32 1.6950991293970873E-4 0.0 0.0 5.761167313064468 0.0 33 1.6950991293970873E-4 0.0 0.0 5.882909332537767 0.0 34 1.6950991293970873E-4 0.0 0.0 6.002379919177674 0.0 35 1.6950991293970873E-4 0.0 0.0 6.127410430962002 0.0 36 1.6950991293970873E-4 0.0 0.0 6.254203845840904 0.0 37 1.6950991293970873E-4 0.0 0.0 6.386896205690109 0.0 38 1.6950991293970873E-4 0.0 0.0 6.5379634401019775 0.0 39 1.6950991293970873E-4 0.0 0.0 6.760563857774403 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 10630 0.0 40.87253 1 AGGGCGA 3510 0.0 40.51282 6 GGGCGAT 7490 0.0 37.82043 7 CGTTAGG 595 0.0 37.436974 2 TAGGGCG 1405 0.0 37.313168 5 GGCGATA 1510 0.0 37.251656 8 ATAGGGC 1515 0.0 36.980198 4 TAAGGGA 2870 0.0 36.925087 4 CGTTGAT 250 0.0 36.9 25 TACGGGA 765 0.0 36.764706 4 CACGACC 1345 0.0 36.4684 27 TAACGGG 865 0.0 36.416187 3 TATGGGC 1310 0.0 36.412212 4 AGGGTAC 1305 0.0 36.37931 6 AAGGGAT 3055 0.0 36.08838 5 TCGTTAG 145 0.0 35.689655 1 GGCACCG 1700 0.0 35.60294 8 GTAGGGC 2005 0.0 35.573566 4 ATAGGGA 3210 0.0 35.537384 4 AACACGT 1235 0.0 35.526318 41 >>END_MODULE