SRR1547656_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547656_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3891675
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	135177	3.473491491452909	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTT	9757	0.25071466656388314	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCT	7788	0.20011948582551214	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTC	6056	0.1556142278067927	No Hit
CGCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTCTG	4357	0.11195693371106272	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	69440	44.22559	1
GTTTTTT	75750	40.559406	2
TACGCGG	285	38.68421	2
AGGGCGA	4435	38.049606	6
GCGATAA	405	37.77778	9
TAGGGTA	2145	37.657345	5
GCGATAC	320	37.26563	9
CGTAAGG	395	37.02532	2
CGGGTAT	530	36.933964	6
TAGGGCG	1780	36.783707	5
TACGGGT	405	36.666668	4
GTTGATC	1360	36.5625	16
CGTTCGG	765	36.47059	45
AGGGTAC	1760	36.434658	6
CGTTTTC	1155	36.23377	1
GGGCGAT	9065	36.039715	7
ACGGGTA	550	35.999996	5
TAGGGTC	1045	35.956936	5
CGTTAGG	495	35.909092	2
TAGGGAC	2965	35.89376	5