##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547652_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1607981 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.40602221046144 31.0 31.0 33.0 30.0 34.0 2 31.820748503869137 31.0 31.0 34.0 30.0 34.0 3 31.904121379543664 31.0 31.0 34.0 30.0 34.0 4 35.63950320308511 37.0 35.0 37.0 33.0 37.0 5 35.538078497196175 37.0 35.0 37.0 33.0 37.0 6 35.584744471483184 37.0 35.0 37.0 33.0 37.0 7 36.00508712478568 37.0 35.0 37.0 35.0 37.0 8 36.026370958363316 37.0 35.0 37.0 35.0 37.0 9 37.78213299784015 39.0 38.0 39.0 35.0 39.0 10 37.11459774711268 39.0 37.0 39.0 33.0 39.0 11 36.884804609009684 39.0 37.0 39.0 32.0 39.0 12 36.421113806692986 39.0 35.0 39.0 32.0 39.0 13 36.25671509800178 39.0 35.0 39.0 32.0 39.0 14 37.33840138658355 39.0 35.0 41.0 32.0 41.0 15 37.474854491439885 39.0 35.0 41.0 32.0 41.0 16 37.53241798255079 39.0 35.0 41.0 32.0 41.0 17 37.44026577428465 39.0 35.0 41.0 32.0 41.0 18 37.273612685722036 39.0 35.0 41.0 32.0 41.0 19 37.16232281351583 38.0 35.0 41.0 32.0 41.0 20 36.985217487022545 38.0 35.0 41.0 32.0 41.0 21 36.89068900689747 38.0 35.0 41.0 32.0 41.0 22 36.799691041125485 38.0 35.0 41.0 31.0 41.0 23 36.696534349597414 38.0 35.0 40.0 31.0 41.0 24 36.57832959469049 38.0 35.0 40.0 31.0 41.0 25 36.449086774035266 38.0 35.0 40.0 31.0 41.0 26 36.2682811550634 38.0 35.0 40.0 31.0 41.0 27 36.23556994765485 38.0 35.0 40.0 30.0 41.0 28 36.241717408352464 38.0 35.0 40.0 30.0 41.0 29 36.17763767109189 38.0 35.0 40.0 30.0 41.0 30 36.1151829530324 38.0 35.0 40.0 30.0 41.0 31 35.94567659692496 38.0 35.0 40.0 30.0 41.0 32 35.63382465340076 38.0 34.0 40.0 29.0 41.0 33 35.37892487535611 38.0 34.0 40.0 27.0 41.0 34 35.012492684926 38.0 34.0 40.0 24.0 41.0 35 34.80954563517852 38.0 34.0 40.0 23.0 41.0 36 34.618072601604126 38.0 34.0 40.0 23.0 41.0 37 34.37976505941302 37.0 33.0 40.0 22.0 41.0 38 34.43935842525502 37.0 34.0 40.0 23.0 41.0 39 34.320883766661424 37.0 33.0 40.0 22.0 41.0 40 34.1892043500514 37.0 33.0 40.0 21.0 41.0 41 34.12441689298568 37.0 33.0 40.0 21.0 41.0 42 34.077002153632414 37.0 33.0 40.0 21.0 41.0 43 33.991030988550236 37.0 33.0 40.0 21.0 41.0 44 33.82570689579043 36.0 33.0 40.0 20.0 41.0 45 33.76482993269199 36.0 33.0 40.0 20.0 41.0 46 33.57811193042704 36.0 33.0 40.0 20.0 41.0 47 33.59380676761728 36.0 33.0 40.0 20.0 41.0 48 33.40819325601484 35.0 33.0 40.0 20.0 41.0 49 33.388706707355375 35.0 33.0 40.0 20.0 41.0 50 33.2519924053829 35.0 33.0 40.0 19.0 41.0 51 32.58117539946056 35.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 2.0 13 13.0 14 22.0 15 54.0 16 125.0 17 366.0 18 792.0 19 1725.0 20 3001.0 21 4800.0 22 7398.0 23 10926.0 24 16446.0 25 25331.0 26 34926.0 27 38183.0 28 37095.0 29 37665.0 30 41864.0 31 49707.0 32 60467.0 33 76403.0 34 121733.0 35 172101.0 36 129755.0 37 156474.0 38 221821.0 39 358569.0 40 212.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.110504415164108 23.454754751455397 27.360273535570386 18.074467297810113 2 34.89406902195984 24.770566318880633 27.379365800964067 12.955998858195464 3 26.43059837149817 25.2175243364194 34.893136175116496 13.458741116965934 4 23.33790013687973 28.457612372285496 34.14088848064747 14.063599010187309 5 21.51580149267933 31.731034135353593 33.41382765094861 13.33933672101847 6 19.656762113482685 40.04705279477805 30.124734060912413 10.171451030826857 7 84.30335930586244 3.5142828180183723 10.605224812979754 1.5771330631394278 8 85.14578219518762 2.8025206765502824 10.00639932934531 2.045297798916778 9 79.83657767100482 4.702543127064312 12.319672931458767 3.1412062704721015 10 41.164665502888404 22.9413158488813 21.015484635701544 14.878534012528755 11 34.791144920244705 25.21920346073741 23.899971454886593 16.08968016413129 12 28.77577533565384 22.66656135862302 30.004894336438053 18.552768969285086 13 22.647717852387558 29.17671290892119 31.31722327564816 16.858345963043096 14 20.134628456430768 30.801545540650043 31.948076500903927 17.11574950201526 15 19.17199270389389 24.366457066345934 39.22583662369145 17.235713606068728 16 21.176183051914172 22.42234205503672 37.654984729297176 18.746490163751936 17 21.6894353851196 23.49978015909392 30.876048908538102 23.93473554724838 18 24.504580588949747 23.976216136882215 32.22140062600242 19.297802648165618 19 25.968776994255528 27.61008992021672 27.295409585063506 19.125723500464247 20 27.66201839449596 25.62698191085591 27.667677665345547 19.043322029302583 21 24.471060292379075 27.406045220683577 28.863400749138208 19.25949373779914 22 24.112038637272455 24.225535003212105 29.35942651063663 22.30299984887881 23 22.104490040616152 27.865627765502204 28.00232092294623 22.027561270935415 24 22.653625882395374 25.364976327456606 33.06755490270096 18.913842887447053 25 21.88806957296137 26.425685378123248 30.83637182280139 20.849873226113992 26 20.747260073346638 29.155133051945263 29.251340656388354 20.846266218319744 27 20.60273100241856 27.282474108835864 30.29500970471666 21.819785184028916 28 19.571562101791002 27.519728155991892 32.93633444673787 19.97237529547924 29 21.021143906551135 26.082522119353403 31.523133668867974 21.37320030522749 30 21.836016719103025 27.32725075731616 31.16187318133734 19.674859342243472 31 24.775292742886887 26.615115477110734 27.699954166125096 20.909637613877276 32 24.7967482202837 26.85678499932524 27.56836057142466 20.7781062089664 33 23.781499905782468 27.87327710961759 26.751746444765207 21.593476539834736 34 20.62785567739917 28.584106404242338 28.23690080915135 22.551137109207136 35 21.710455533989517 28.34772301414009 28.621669037134147 21.320152414736242 36 24.34058611389065 28.217186645862107 26.385697343438757 21.05652989680848 37 22.34193065714085 29.24275846542963 27.951885003616333 20.463425873813186 38 22.646536246385995 29.168441666910244 26.765614767836187 21.419407318867574 39 22.109092085043294 29.053079607283916 26.80112513767265 22.036703170000145 40 23.475774900325312 27.28421542294343 26.847145581944066 22.39286409478719 41 20.471510546455463 26.514243638450953 27.929185730428408 25.08506008466518 42 22.889698323549844 27.91736967041277 26.07145233681244 23.121479669224946 43 22.378436063610206 26.912755809925613 28.12427510026549 22.58453302619869 44 22.078805657529536 28.905005718351152 27.11953686019922 21.896651763920097 45 21.033333105304106 30.70931808273854 25.47418159791689 22.783167214040464 46 23.04461308933377 29.14487173666853 25.966786920989737 21.843728253007967 47 22.60275463453859 28.74741679161632 27.058528676644812 21.59129989720028 48 22.93746008192883 26.803426159886218 27.815254035961868 22.443859722223085 49 22.55126148878625 25.643648774456913 28.431057332145095 23.374032404611746 50 21.278112116996407 28.30543395724203 28.1707308730638 22.24572305269776 51 20.75248401566934 28.96147404726797 27.129549416317726 23.15649252074496 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1029.0 1 1264.0 2 1499.0 3 14022.5 4 26546.0 5 18198.0 6 9850.0 7 10311.5 8 10773.0 9 11932.0 10 13091.0 11 13922.5 12 14754.0 13 15024.0 14 15294.0 15 14977.0 16 14660.0 17 14050.0 18 13440.0 19 12912.0 20 12384.0 21 12081.0 22 11778.0 23 11309.5 24 10841.0 25 11206.5 26 12659.0 27 13746.0 28 14909.5 29 16073.0 30 18292.0 31 20511.0 32 23398.0 33 26285.0 34 32533.5 35 38782.0 36 42570.5 37 46359.0 38 51743.5 39 57128.0 40 67417.5 41 77707.0 42 88563.0 43 99419.0 44 106401.0 45 113383.0 46 119262.5 47 125142.0 48 126385.5 49 127629.0 50 123270.5 51 118912.0 52 110684.0 53 102456.0 54 95177.5 55 87899.0 56 83006.0 57 78113.0 58 73589.0 59 69065.0 60 63682.0 61 58299.0 62 53124.5 63 47950.0 64 42729.5 65 37509.0 66 31981.5 67 26454.0 68 22098.0 69 17742.0 70 14945.0 71 12148.0 72 10289.0 73 8430.0 74 7094.0 75 4639.5 76 3521.0 77 2906.0 78 2291.0 79 1647.5 80 1004.0 81 685.0 82 366.0 83 248.5 84 131.0 85 157.0 86 183.0 87 110.5 88 38.0 89 29.0 90 20.0 91 14.0 92 8.0 93 7.0 94 6.0 95 4.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1607981.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.235777193604218 #Duplication Level Percentage of deduplicated Percentage of total 1 75.86445422524484 22.93820734868889 2 6.8758923412087825 4.157958976719969 3 2.8929726852815123 2.624138326180641 4 1.8359721320165576 2.220481772692766 5 1.3235046647823387 2.000859607952732 6 1.0690742530971828 1.9394574552039163 7 0.8822763229124108 1.867341722594044 8 0.7894604782569844 1.909596089898753 9 0.677723074797872 1.8442335499697542 >10 7.333223102635245 47.288980055716436 >50 0.4233462004695108 8.110630489042686 >100 0.029599183291513276 1.4423883738117511 >500 0.002084446671072031 0.4522034072251224 >1k 2.0844466710720312E-4 0.08716338845886332 >5k 0.0 0.0 >10k+ 2.0844466710720312E-4 1.1163594358437063 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17713 1.1015677424049166 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.043781611847403666 0.0 2 0.0 0.0 0.0 0.1407976835547186 0.0 3 0.0 0.0 0.0 0.24795069095965686 0.0 4 0.0 0.0 0.0 0.38731800935458816 0.0 5 0.0 0.0 0.0 0.6491370233852266 0.0 6 0.0 0.0 0.0 1.3880761028892754 0.0 7 0.0 0.0 0.0 1.7974714875362334 0.0 8 0.0 0.0 0.0 2.6258394844217685 0.0 9 0.0 0.0 0.0 3.1466167821634707 0.0 10 0.0 0.0 0.0 3.7822586212150515 0.0 11 0.0 0.0 0.0 4.17791006237014 0.0 12 0.0 0.0 0.0 4.5414715721143475 0.0 13 0.0 0.0 0.0 4.782270437275067 0.0 14 0.0 0.0 0.0 4.926115420518029 0.0 15 0.0 0.0 0.0 5.033454997291635 0.0 16 0.0 0.0 0.0 5.169775015998323 0.0 17 0.0 0.0 0.0 5.3136199992412845 0.0 18 0.0 0.0 0.0 5.5460854326015046 0.0 19 0.0 0.0 0.0 5.663997273599626 0.0 20 0.0 0.0 0.0 5.798886927146527 0.0 21 0.0 0.0 0.0 5.935828843748776 0.0 22 0.0 0.0 0.0 6.09012171163714 0.0 23 0.0 0.0 0.0 6.262263049128068 0.0 24 0.0 0.0 0.0 6.420162924810679 0.0 25 0.0 0.0 0.0 6.553373454039569 0.0 26 0.0 0.0 0.0 6.686459603689347 0.0 27 0.0 0.0 0.0 6.820043271655573 0.0 28 0.0 0.0 0.0 6.961338473526739 0.0 29 0.0 0.0 0.0 7.110096450144622 0.0 30 0.0 0.0 0.0 7.319489471579577 0.0 31 0.0 0.0 0.0 7.471419127464815 0.0 32 0.0 0.0 0.0 7.656806890131165 0.0 33 0.0 0.0 0.0 7.817194357396014 0.0 34 0.0 0.0 0.0 7.981126642665554 0.0 35 0.0 0.0 0.0 8.141451920140847 0.0 36 0.0 0.0 0.0 8.297548291926335 0.0 37 0.0 0.0 0.0 8.460734299721203 0.0 38 0.0 0.0 0.0 8.652900749449154 0.0 39 0.0 0.0 0.0 8.903090272832825 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTACCG 25 3.8915023E-5 45.0 1 CGTTTTT 12555 0.0 43.351254 1 CATACGA 230 0.0 41.08696 18 TACGGGA 365 0.0 40.68493 4 TATTACG 50 1.0822987E-9 40.5 1 TCGTAAG 50 1.0822987E-9 40.5 1 GCGATTT 260 0.0 38.942307 9 AGGGCGA 1965 0.0 38.587784 6 ATACCGG 70 0.0 38.571426 2 GTTTTTT 14450 0.0 38.444637 2 GGGCGAT 3915 0.0 37.47126 7 GGCGATT 900 0.0 37.250004 8 GACCGAT 1145 0.0 37.13974 9 CGAGGGT 340 0.0 37.058826 4 AGTACGG 195 0.0 36.923077 2 CGAATAT 135 0.0 36.666668 14 GGCGATA 755 0.0 36.65563 8 CGTAAGG 210 0.0 36.42857 2 AAGGGAC 1470 0.0 36.42857 5 ACGGGTA 235 0.0 36.38298 5 >>END_MODULE