##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547651_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3825938 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.421771863527322 31.0 31.0 33.0 30.0 34.0 2 31.83310236600802 31.0 31.0 34.0 30.0 34.0 3 31.950280689336836 31.0 31.0 34.0 30.0 34.0 4 35.655601841953526 37.0 35.0 37.0 33.0 37.0 5 35.54758048875858 37.0 35.0 37.0 33.0 37.0 6 35.58760701297303 37.0 35.0 37.0 33.0 37.0 7 35.980189956031694 37.0 35.0 37.0 35.0 37.0 8 35.98375378795997 37.0 35.0 37.0 35.0 37.0 9 37.714323389453774 39.0 37.0 39.0 35.0 39.0 10 37.129463676619956 39.0 37.0 39.0 33.0 39.0 11 36.889153718643634 39.0 37.0 39.0 32.0 39.0 12 36.41514002579237 39.0 35.0 39.0 32.0 39.0 13 36.249831544578086 39.0 35.0 39.0 32.0 39.0 14 37.3083863355862 39.0 35.0 41.0 32.0 41.0 15 37.439847169504574 39.0 35.0 41.0 32.0 41.0 16 37.496228375891086 39.0 35.0 41.0 32.0 41.0 17 37.387894419616835 39.0 35.0 41.0 32.0 41.0 18 37.281632896298895 39.0 35.0 41.0 32.0 41.0 19 37.21704716594989 39.0 35.0 41.0 32.0 41.0 20 37.099555455420344 39.0 35.0 41.0 32.0 41.0 21 36.96265621659316 39.0 35.0 41.0 31.0 41.0 22 36.86800883861683 38.0 35.0 41.0 31.0 41.0 23 36.74299139191487 38.0 35.0 41.0 31.0 41.0 24 36.60886271549617 38.0 35.0 41.0 31.0 41.0 25 36.46663380326602 38.0 35.0 40.0 31.0 41.0 26 36.29803645537382 38.0 35.0 40.0 30.0 41.0 27 36.277640672692556 38.0 35.0 40.0 30.0 41.0 28 36.28325262981261 38.0 35.0 40.0 30.0 41.0 29 36.235390902832194 38.0 35.0 40.0 30.0 41.0 30 36.25022778727726 38.0 35.0 40.0 30.0 41.0 31 36.1057259683769 38.0 35.0 40.0 30.0 41.0 32 35.873630205194125 38.0 35.0 40.0 29.0 41.0 33 35.68778323119716 38.0 35.0 40.0 29.0 41.0 34 35.42458450711956 38.0 34.0 40.0 27.0 41.0 35 35.262118988859726 38.0 34.0 40.0 26.0 41.0 36 35.0748496185772 38.0 34.0 40.0 25.0 41.0 37 34.81322802408194 37.0 34.0 40.0 24.0 41.0 38 34.83360341960586 37.0 34.0 40.0 24.0 41.0 39 34.716287613651865 37.0 34.0 40.0 24.0 41.0 40 34.51980795297781 37.0 33.0 40.0 23.0 41.0 41 34.44345857146666 37.0 33.0 40.0 23.0 41.0 42 34.391195309490115 37.0 33.0 40.0 23.0 41.0 43 34.30178612408251 36.0 33.0 40.0 23.0 41.0 44 34.14167270875796 36.0 33.0 40.0 23.0 41.0 45 34.060325337211424 36.0 33.0 40.0 23.0 41.0 46 33.861796244476515 35.0 33.0 40.0 23.0 41.0 47 33.87042367126702 35.0 33.0 40.0 23.0 41.0 48 33.70088067292256 35.0 33.0 40.0 22.0 41.0 49 33.65654331042479 35.0 33.0 40.0 22.0 41.0 50 33.49283548243594 35.0 33.0 39.0 22.0 41.0 51 32.79511978500436 35.0 32.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 4.0 12 11.0 13 20.0 14 59.0 15 156.0 16 444.0 17 1098.0 18 2378.0 19 4491.0 20 7711.0 21 11691.0 22 17280.0 23 24893.0 24 35415.0 25 50395.0 26 65466.0 27 76157.0 28 81277.0 29 88305.0 30 100666.0 31 118542.0 32 143830.0 33 182812.0 34 290531.0 35 416647.0 36 312967.0 37 394431.0 38 546560.0 39 851205.0 40 492.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.473951224510174 23.773621004835938 26.6013981407958 15.15102962985809 2 33.815968789875846 25.034383724984565 26.999470456656642 14.150177028482949 3 29.21790682441796 26.10795052089187 30.834033379526797 13.840109275163373 4 25.342830960668994 28.53391769547755 30.59921514671696 15.524036197136493 5 23.501138805699412 31.348364767019227 29.54224558787936 15.608250839401997 6 21.638066272898307 39.929293156344926 27.469028510132677 10.963612060624088 7 85.98714877240562 4.446491291808702 7.821820426781616 1.7445395090040665 8 86.18579286961786 3.584506596813644 7.778850572068863 2.4508499614996375 9 81.0037433957372 5.374499011745616 10.145119967966025 3.476637624551156 10 43.09761423211772 27.08201230652457 15.979323240470702 13.841050220887007 11 35.5605082988799 26.679705734907362 22.465340525643647 15.294445440569085 12 29.622591897725474 24.192995286384672 27.650082149789153 18.534330666100704 13 23.717582459517118 29.874869901185015 29.05250947610756 17.355038163190308 14 20.84994581720875 30.93657032602201 30.36481511200652 17.848668744762723 15 20.45806806069518 23.538593672976404 37.526954174375014 18.4763840919534 16 23.048831423823387 22.165649312665288 35.432801054277405 19.352718209233917 17 22.209795349532584 22.755909792578972 29.206955261690076 25.827339596198367 18 26.145431525550073 22.005479440597313 30.220876553671282 21.62821248018133 19 28.677673292144306 25.02246507915183 25.457260415615725 20.842601213088134 20 30.86108556908136 24.142236492070705 24.852859612466276 20.14381832638166 21 27.078849683397898 26.360097837445352 26.573509555042452 19.987542924114297 22 26.651843286535225 23.21613680096227 25.994906347149378 24.137113565353125 23 24.145765038534343 27.929908953046283 25.571506908893976 22.352819099525398 24 23.638203232775858 24.966740182407555 31.422621067042904 19.972435517773683 25 23.21428104689621 25.458802521107245 29.587463257376363 21.739453174620184 26 21.919748830221504 28.451323570847205 27.206321691569492 22.422605907361802 27 23.126485583404644 26.18829683073798 27.844727227675932 22.840490358181444 28 21.399902455293315 27.237320625687083 30.930401904055948 20.43237501496365 29 22.075553759627052 25.21841702609922 30.48886312323932 22.217166091034407 30 23.68778584493528 25.45616264560482 29.580615263498782 21.27543624596112 31 26.847873645626247 25.789597217728044 25.96970991166088 21.392819224984827 32 27.311341689279857 25.06637587958822 26.53610696252788 21.08617546860404 33 25.751358229014688 25.603525200878842 25.6542578578116 22.990858712294866 34 22.603424310587364 27.80944176303955 28.50197781563632 21.085156110736765 35 23.438801151508468 27.501621824504213 28.02157274895725 21.03800427503007 36 27.092728632821544 27.872458989142007 24.84371152904203 20.191100848994417 37 24.554030933067917 28.341755668805924 25.951073958856625 21.153139439269534 38 24.699877520231638 29.247337515662824 25.05464019542397 20.998144768681563 39 24.942693791692392 28.13375438911974 24.51613173031032 22.40742008887755 40 26.81449620981835 26.32815795760412 25.148159745401 21.70918608717653 41 22.30357627332173 26.07831073059731 25.96077092728633 25.65734206879463 42 25.471348464089065 26.171621181524635 24.9618786295021 23.395151724884197 43 24.582494541207932 25.568213598861245 26.259129133822867 23.59016272610795 44 24.030446912626395 27.532699170765447 26.642329279774007 21.794524636834154 45 22.367011697523587 28.32505388221137 25.1276941759119 24.18024024435315 46 23.939933161488764 27.69156217377281 25.681937344515255 22.686567320223173 47 23.406207837136932 27.221533647434953 27.400417884450817 21.971840630977294 48 25.050719588242153 25.306264764353216 27.50682316336543 22.136192484039206 49 24.282803328229573 25.451614741273904 27.201303314376762 23.06427861611976 50 22.577522165806137 28.491261489339347 26.882688637400815 22.0485277074537 51 22.912551118183305 28.29387198642529 25.365178421605368 23.428398473786036 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2665.0 1 3554.0 2 4443.0 3 22341.5 4 40240.0 5 28838.0 6 17436.0 7 18523.0 8 19610.0 9 20806.5 10 22003.0 11 22797.0 12 23591.0 13 23883.5 14 24176.0 15 23574.0 16 22972.0 17 22355.5 18 21739.0 19 22118.0 20 22497.0 21 22578.5 22 22660.0 23 23246.0 24 23832.0 25 24062.5 26 27830.0 27 31367.0 28 34498.5 29 37630.0 30 42296.5 31 46963.0 32 55641.5 33 64320.0 34 73868.0 35 83416.0 36 92235.0 37 101054.0 38 113774.0 39 126494.0 40 146257.5 41 166021.0 42 195472.5 43 224924.0 44 234678.5 45 244433.0 46 254724.5 47 265016.0 48 270246.0 49 275476.0 50 273620.5 51 271765.0 52 266548.0 53 261331.0 54 245454.5 55 229578.0 56 213593.0 57 197608.0 58 189636.5 59 181665.0 60 173112.5 61 164560.0 62 150710.5 63 136861.0 64 125506.5 65 114152.0 66 101549.0 67 88946.0 68 77765.5 69 66585.0 70 57127.5 71 47670.0 72 43458.5 73 39247.0 74 34697.5 75 24274.0 76 18400.0 77 14266.0 78 10132.0 79 7314.5 80 4497.0 81 3251.5 82 2006.0 83 1411.5 84 817.0 85 639.0 86 461.0 87 291.5 88 122.0 89 89.0 90 56.0 91 47.0 92 38.0 93 26.0 94 14.0 95 9.5 96 5.0 97 3.5 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3825938.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.84803668644208 #Duplication Level Percentage of deduplicated Percentage of total 1 81.07309075482473 16.90214770339834 2 5.974687940019355 2.491210267271331 3 1.989010407661106 1.2440088584590157 4 1.092067261510297 0.9106983332811603 5 0.7637726219078335 0.7961579820817282 6 0.551832526055607 0.6902774848787578 7 0.3882572428556287 0.5666080869981699 8 0.33753012568643526 0.5629472354472166 9 0.30851772428513474 0.57887899508827 >10 4.819529242494747 25.799411697046803 >50 2.0934683920102697 30.946400876529705 >100 0.6019977745857766 16.68047030387555 >500 0.0044557043594358504 0.6233364769088503 >1k 0.0016549759049332947 0.5778986821175667 >5k 0.0 0.0 >10k+ 1.2730583884102266E-4 0.629547016617465 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23720 0.6199786823518834 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4479 0.11706933044916044 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5682428727282043E-4 0.0 0.0 0.02017805829576956 0.0 2 1.5682428727282043E-4 0.0 0.0 0.06244220371579466 0.0 3 1.5682428727282043E-4 0.0 0.0 0.11492606518976523 0.0 4 1.5682428727282043E-4 0.0 0.0 0.22130520672316176 0.0 5 1.5682428727282043E-4 0.0 0.0 0.37413047467052524 0.0 6 1.5682428727282043E-4 0.0 0.0 0.8783989703962793 0.0 7 1.5682428727282043E-4 0.0 0.0 1.1401125684734044 0.0 8 1.5682428727282043E-4 0.0 0.0 1.8261404131483574 0.0 9 1.5682428727282043E-4 0.0 0.0 2.233360812433448 0.0 10 2.0909904969709388E-4 0.0 0.0 2.7680270825089166 0.0 11 2.0909904969709388E-4 0.0 0.0 3.077153890104858 0.0 12 2.0909904969709388E-4 0.0 0.0 3.3498190509098684 0.0 13 2.0909904969709388E-4 0.0 0.0 3.5143800030214813 0.0 14 2.0909904969709388E-4 0.0 0.0 3.6011299712645632 0.0 15 2.0909904969709388E-4 0.0 0.0 3.6640949226046007 0.0 16 2.0909904969709388E-4 0.0 0.0 3.7523869963391983 0.0 17 2.0909904969709388E-4 0.0 0.0 3.8393983383944015 0.0 18 2.0909904969709388E-4 0.0 0.0 3.976201391658725 2.6137381212136735E-5 19 2.0909904969709388E-4 0.0 0.0 4.054456711007862 2.6137381212136735E-5 20 2.6137381212136735E-4 0.0 0.0 4.132921129406697 2.6137381212136735E-5 21 2.6137381212136735E-4 0.0 0.0 4.2193574490752335 2.6137381212136735E-5 22 2.875111933335041E-4 0.0 0.0 4.30898252925165 2.6137381212136735E-5 23 2.875111933335041E-4 0.0 0.0 4.415492357691107 2.6137381212136735E-5 24 2.875111933335041E-4 0.0 0.0 4.503000309989341 2.6137381212136735E-5 25 2.875111933335041E-4 0.0 0.0 4.580288546233629 2.6137381212136735E-5 26 2.875111933335041E-4 0.0 0.0 4.652453855760339 2.6137381212136735E-5 27 2.875111933335041E-4 0.0 0.0 4.733375187993114 2.6137381212136735E-5 28 2.875111933335041E-4 0.0 0.0 4.812728277353162 2.6137381212136735E-5 29 2.875111933335041E-4 0.0 0.0 4.905829629230793 2.6137381212136735E-5 30 2.875111933335041E-4 0.0 0.0 5.0387120753132955 2.6137381212136735E-5 31 2.875111933335041E-4 0.0 0.0 5.13858300892487 2.6137381212136735E-5 32 2.875111933335041E-4 0.0 0.0 5.271465455007373 2.6137381212136735E-5 33 2.875111933335041E-4 0.0 0.0 5.370160206464401 2.6137381212136735E-5 34 2.875111933335041E-4 0.0 0.0 5.468358347678399 2.6137381212136735E-5 35 2.875111933335041E-4 0.0 0.0 5.578997882349374 2.6137381212136735E-5 36 2.875111933335041E-4 0.0 0.0 5.6752879947348855 2.6137381212136735E-5 37 2.875111933335041E-4 0.0 0.0 5.778765886953735 2.6137381212136735E-5 38 2.875111933335041E-4 0.0 0.0 5.89612272859623 2.6137381212136735E-5 39 2.875111933335041E-4 0.0 0.0 6.087631320737555 2.6137381212136735E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 18730 0.0 40.80753 1 GGGCGAT 10390 0.0 37.247353 7 AGGGCGA 5165 0.0 37.071636 6 CACGACC 4390 0.0 37.004555 27 ACGACCA 4455 0.0 36.666664 28 AGACACG 4385 0.0 36.636257 24 CGACCAA 4460 0.0 36.57511 29 TACGGGA 905 0.0 36.54696 4 GACACGA 4425 0.0 36.406776 25 AACACGT 4040 0.0 36.367577 41 ACACGAC 4430 0.0 36.36569 26 AAACACG 4470 0.0 36.040268 40 GCGATAA 375 0.0 36.0 9 TCAAGCG 4475 0.0 36.0 17 CGTTCGG 515 0.0 35.82524 45 TGGTCAA 4525 0.0 35.801105 14 GACCGAT 3075 0.0 35.560978 9 ACGTGAG 4150 0.0 35.186745 44 ACACGTG 4170 0.0 35.179855 42 GCGAGAC 4580 0.0 35.12555 21 >>END_MODULE