##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547648_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1342354 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.225935185502482 31.0 31.0 33.0 30.0 34.0 2 31.594778277563147 31.0 31.0 34.0 30.0 34.0 3 31.489510218615955 31.0 31.0 34.0 30.0 34.0 4 35.40479933013199 37.0 35.0 37.0 33.0 37.0 5 35.35642460930574 37.0 35.0 37.0 33.0 37.0 6 35.418238408050335 37.0 35.0 37.0 33.0 37.0 7 35.87918388145005 37.0 35.0 37.0 35.0 37.0 8 35.92393288208625 37.0 35.0 37.0 35.0 37.0 9 37.74453534611585 39.0 37.0 39.0 35.0 39.0 10 37.10839465595514 39.0 37.0 39.0 33.0 39.0 11 36.79280875238573 39.0 35.0 39.0 32.0 39.0 12 36.09841219231291 38.0 35.0 39.0 32.0 39.0 13 35.84938995227787 38.0 35.0 39.0 31.0 39.0 14 36.871362546690364 39.0 35.0 41.0 31.0 41.0 15 37.136572766945235 39.0 35.0 41.0 32.0 41.0 16 37.25024173951134 39.0 35.0 41.0 32.0 41.0 17 37.16804360101732 39.0 35.0 41.0 32.0 41.0 18 36.98055356485696 38.0 35.0 40.0 32.0 41.0 19 36.83598886731816 38.0 35.0 40.0 32.0 41.0 20 36.556090271269724 38.0 35.0 40.0 32.0 41.0 21 36.353013437588 37.0 35.0 40.0 31.0 41.0 22 36.279602846939035 37.0 35.0 40.0 31.0 41.0 23 36.220023928114344 37.0 35.0 40.0 31.0 41.0 24 36.07855230438469 37.0 35.0 40.0 31.0 41.0 25 35.943119326198605 36.0 35.0 40.0 31.0 41.0 26 35.80853932718195 36.0 35.0 40.0 31.0 41.0 27 35.722391410909495 36.0 35.0 40.0 30.0 41.0 28 35.655775600177 36.0 35.0 40.0 30.0 41.0 29 35.63370616096797 36.0 35.0 40.0 30.0 41.0 30 35.50643570920934 36.0 34.0 40.0 30.0 41.0 31 35.30529279161831 36.0 34.0 40.0 29.0 41.0 32 35.01276935890235 35.0 34.0 40.0 27.0 41.0 33 34.75590641514832 35.0 34.0 40.0 25.0 41.0 34 34.540464735829744 35.0 34.0 40.0 24.0 41.0 35 34.26524970313345 35.0 33.0 40.0 23.0 41.0 36 34.08501781199296 35.0 33.0 40.0 22.0 41.0 37 33.98753011500692 35.0 33.0 40.0 22.0 41.0 38 33.893589917413735 35.0 33.0 40.0 22.0 41.0 39 33.84694424868552 35.0 33.0 40.0 22.0 41.0 40 33.717724981636735 35.0 33.0 40.0 21.0 41.0 41 33.641855278115905 35.0 33.0 40.0 21.0 41.0 42 33.57587491824064 35.0 33.0 40.0 21.0 41.0 43 33.494403115720594 35.0 33.0 40.0 20.0 41.0 44 33.35965252087006 35.0 33.0 40.0 19.0 41.0 45 33.270482301985915 35.0 33.0 40.0 20.0 41.0 46 33.216394483124425 35.0 33.0 40.0 20.0 41.0 47 33.16645013163443 35.0 33.0 40.0 20.0 41.0 48 33.03231189388194 35.0 33.0 40.0 18.0 41.0 49 32.98741092141119 35.0 32.0 39.0 18.0 41.0 50 32.87303274695051 35.0 32.0 39.0 18.0 41.0 51 32.48329129275884 35.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 5.0 12 0.0 13 4.0 14 9.0 15 33.0 16 120.0 17 288.0 18 726.0 19 1447.0 20 2602.0 21 4314.0 22 6796.0 23 10443.0 24 16323.0 25 23115.0 26 29961.0 27 32081.0 28 32141.0 29 33339.0 30 38115.0 31 44967.0 32 55097.0 33 70571.0 34 116673.0 35 196063.0 36 118569.0 37 112101.0 38 145011.0 39 251325.0 40 113.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.770984405007916 23.75140983674947 27.431959080838585 19.045646677404022 2 34.264731955952 25.78336265992428 27.930486294971374 12.021419089152339 3 25.604423274337467 24.370918550546282 37.24658324108246 12.778074934033794 4 23.261449662309644 26.558865992130244 36.86710063068311 13.312583714876999 5 21.468479998569677 30.56436677657309 35.66629964971982 12.300853575137408 6 19.329252939239574 38.308821667011834 32.23583346866773 10.126091925080866 7 82.05048742731053 3.1694322064075497 12.830296628162168 1.9497837381197507 8 81.81366465179826 3.227017612343689 12.406563395348767 2.5527543405092845 9 77.60881257850015 5.5855608878134975 14.231938817927311 2.573687715759032 10 41.236439866085995 30.03462573955901 18.69231216206753 10.03662223228746 11 35.573105157059906 22.77476731175234 28.19092430163727 13.461203229550476 12 34.30712017843282 23.028724166650527 27.552195620529307 15.111960034387353 13 18.447890794827593 38.44023260630207 29.11564311649535 13.996233482374992 14 12.976532270921085 40.38852642447522 30.706505139478857 15.928436165124849 15 11.500319587828546 28.629854717906007 45.31531920789896 14.554506486366487 16 12.98390737465676 26.359738191266985 45.00824670690444 15.64810772717182 17 13.435129630484955 28.335595528452256 30.82465579124434 27.40461904981845 18 16.691051689792708 30.89967326055571 35.76202700628895 16.64724804336263 19 21.361801730393026 33.267901015678426 27.579386659554782 17.790910594373766 20 23.94576989378361 29.829389266914692 29.170099690543626 17.054741148758076 21 17.204776087380825 34.35695800064663 31.161973667154864 17.276292244817686 22 17.931335549340936 29.79832443602805 29.403197666189396 22.867142348441618 23 14.619541492035633 34.3293944816345 29.04137060715728 22.00969341917259 24 15.751880651452597 29.887943120816118 39.17431616399251 15.185860063738776 25 13.587101465038284 32.21929535726045 35.13134389289264 19.06225928480863 26 13.8988672138646 38.23842294953492 30.415747261899618 17.446962574700862 27 14.008376329939793 38.79982478541428 31.001211304916588 16.19058757972934 28 12.448355649850933 33.705937479979205 37.97254673506392 15.873160135105941 29 13.003350829959906 28.749867769604737 38.22344925407158 20.023332146363774 30 14.880500970682844 35.976277494610216 33.36668270813809 15.776538826568848 31 21.806840818442826 32.57709963243675 27.992466964749983 17.623592584370442 32 21.82248497788214 32.269654651455575 29.085174253587354 16.82268611707493 33 20.499585057294873 32.761402729831325 28.217593868681433 18.521418344192366 34 14.254213121129004 32.96947005037419 30.28895507444385 22.487361754052955 35 14.65202174687154 32.199106941984006 32.33260376919948 20.81626754194497 36 22.35684476673068 31.079581094107812 29.507045086467503 17.056529052694 37 15.443169238516816 36.0988979062155 30.980352425664172 17.477580429603517 38 15.222065118441186 37.48653484848259 28.018689555810166 19.272710477266056 39 16.196100283531766 36.07863499494172 29.53870588533278 18.18655883619373 40 19.871583799802437 33.15429461975008 27.761380381032126 19.212741199415355 41 14.738735087763736 30.854975662157674 30.064871114475018 24.341418135603572 42 18.74803516807042 31.218516129128382 26.27563221028134 23.757816492519858 43 18.683372642387923 31.907902088420787 27.461682983773283 21.947042285418007 44 16.26247621715285 35.50509031149756 28.54172595306454 19.69070751828504 45 14.36923494100662 40.638311503522914 25.021939071213705 19.97051448425676 46 18.823201629376456 37.24211348124265 26.294330705611184 17.640354183769706 47 17.33991182653756 33.24309384856752 27.913054231596135 21.503940093298787 48 18.478061673746268 30.111356616808976 31.677485968678905 19.733095740765847 49 17.26802318911405 29.275735014757657 31.095523237536447 22.360718558591845 50 15.664869326571083 35.00805301731138 30.521457082110974 18.80562057400656 51 14.639506419320089 36.07595313903784 27.521950245613304 21.762590196028768 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2031.0 1 2078.5 2 2126.0 3 22691.5 4 43257.0 5 27523.5 6 11790.0 7 12440.5 8 13091.0 9 16606.5 10 20122.0 11 23572.5 12 27023.0 13 27910.5 14 28798.0 15 26322.5 16 23847.0 17 21386.0 18 18925.0 19 17072.5 20 15220.0 21 14180.5 22 13141.0 23 12118.5 24 11096.0 25 12143.0 26 13730.0 27 14270.0 28 16686.0 29 19102.0 30 22358.5 31 25615.0 32 29813.0 33 34011.0 34 39240.5 35 44470.0 36 46085.0 37 47700.0 38 53050.0 39 58400.0 40 72398.5 41 86397.0 42 98934.5 43 111472.0 44 118575.0 45 125678.0 46 127780.0 47 129882.0 48 127665.0 49 125448.0 50 109162.5 51 92877.0 52 78060.0 53 63243.0 54 51444.0 55 39645.0 56 33141.5 57 26638.0 58 23264.5 59 19891.0 60 16217.0 61 12543.0 62 9868.5 63 7194.0 64 6374.5 65 5555.0 66 4307.5 67 3060.0 68 2608.0 69 2156.0 70 1664.0 71 1172.0 72 962.5 73 753.0 74 617.0 75 451.5 76 422.0 77 362.5 78 303.0 79 235.5 80 168.0 81 144.0 82 120.0 83 66.5 84 13.0 85 10.0 86 7.0 87 6.5 88 6.0 89 4.0 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1342354.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.58029973862968 #Duplication Level Percentage of deduplicated Percentage of total 1 76.08018842458074 20.222342124967806 2 9.033142469680655 4.802072688517148 3 3.8583223847416424 3.07666096424092 4 2.243599478444963 2.3854218652200134 5 1.4784983991821534 1.9649465306672897 6 0.9782802772739373 1.5601789798998607 7 0.7161217717922186 1.3324311940517015 8 0.5023145612702814 1.0681337281313876 9 0.3912016211074298 0.9358430712545992 >10 3.183489680056166 18.325952897174144 >50 0.9503835776973892 18.357466897673895 >100 0.5782216307044273 21.231337719110588 >500 0.003401303709838546 0.613717414170815 >1k 0.0025509777823789093 1.2907201988183654 >5k 0.0 0.0 >10k+ 2.8344197581987884E-4 2.8327737261014794 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 37600 2.801049499610386 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2732 0.2035230647057334 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2530 0.18847487324506054 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTCCTTCAGTCGTATGCCGTCTT 2522 0.18787890526642004 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTCCTTCAGTCGTATGCCGTCT 1902 0.1416913869217807 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1711 0.12746265143173857 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1552 0.11561778785625848 No Hit CGCTGTCTCTTATACACATCTGACGCTCCTTCAGTCGTATGCCGTCTTCTG 1551 0.11554329185892842 No Hit CGTTCTGTCTCTTATACACATCTGACGCTCCTTCAGTCGTATGCCGTCTTC 1548 0.11531980386693824 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0896931807853964 0.0 2 0.0 0.0 0.0 0.28800152567802534 0.0 3 0.0 0.0 0.0 0.5272081731048591 0.0 4 0.0 0.0 0.0 0.8706347207964517 0.0 5 0.0 0.0 0.0 1.54974023245731 0.0 6 0.0 0.0 0.0 2.722381726429839 0.0 7 0.0 0.0 0.0 3.507644034286038 0.0 8 0.0 0.0 0.0 4.87144225740751 0.0 9 0.0 0.0 0.0 5.4948247630654805 0.0 10 0.0 0.0 0.0 6.23427203256369 0.0 11 0.0 0.0 0.0 6.998377477178151 0.0 12 0.0 0.0 0.0 7.578999280368666 0.0 13 0.0 0.0 0.0 7.856943846407132 0.0 14 0.0 0.0 0.0 7.987162849740083 0.0 15 0.0 0.0 0.0 8.121479132926188 0.0 16 0.0 0.0 0.0 8.402478034855188 0.0 17 0.0 0.0 0.0 8.728919495155525 0.0 18 0.0 0.0 0.0 9.137679032505584 0.0 19 0.0 0.0 0.0 9.356101296677329 0.0 20 0.0 0.0 0.0 9.587113384397856 0.0 21 0.0 0.0 0.0 9.906701212943828 0.0 22 0.0 0.0 0.0 10.22539508952184 0.0 23 0.0 0.0 0.0 10.581113476772893 0.0 24 0.0 0.0 0.0 10.854066810990245 0.0 25 0.0 0.0 0.0 11.078523250945727 0.0 26 0.0 0.0 0.0 11.29195428329636 0.0 27 0.0 0.0 0.0 11.49473238802879 0.0 28 0.0 0.0 0.0 11.707194972414133 0.0 29 0.0 0.0 0.0 11.952435795624702 0.0 30 0.0 0.0 0.0 12.258092872669952 0.0 31 0.0 0.0 0.0 12.519126847314494 0.0 32 0.0 0.0 0.0 12.750585911019002 0.0 33 0.0 0.0 0.0 12.993368366317677 0.0 34 0.0 0.0 0.0 13.232202533757862 0.0 35 0.0 0.0 0.0 13.523258395326419 0.0 36 0.0 0.0 0.0 13.77118107444087 0.0 37 0.0 0.0 0.0 14.01776282560338 0.0 38 0.0 0.0 0.0 14.274997504384089 0.0 39 0.0 0.0 0.0 14.542363638801687 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTAG 30 2.1657743E-6 45.000004 1 CGCATCG 30 2.1657743E-6 45.000004 21 GATCCGC 30 2.1657743E-6 45.000004 9 CGTTCGG 30 2.1657743E-6 45.000004 45 TACATCG 30 2.1657743E-6 45.000004 16 TACGCCT 30 2.1657743E-6 45.000004 34 TCCACGG 35 1.2121382E-7 45.000004 2 TCGAGCG 30 2.1657743E-6 45.000004 1 CGATAGA 65 0.0 45.000004 10 TCCGGAC 20 7.0337113E-4 45.0 16 CGTGGTC 20 7.0337113E-4 45.0 22 AGTCCGC 25 3.891157E-5 45.0 40 GTCGACC 20 7.0337113E-4 45.0 17 GGTCGAC 20 7.0337113E-4 45.0 9 CGTGCCC 20 7.0337113E-4 45.0 20 GAGTCGA 20 7.0337113E-4 45.0 15 ACTTCGA 20 7.0337113E-4 45.0 23 CATCTCG 40 6.8157533E-9 45.0 22 TGCGGTC 20 7.0337113E-4 45.0 29 CGATTAC 25 3.891157E-5 45.0 10 >>END_MODULE