##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547646_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1404574 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.167188770402984 31.0 31.0 33.0 30.0 34.0 2 31.544416314127986 31.0 31.0 34.0 30.0 34.0 3 31.58807296731963 31.0 31.0 34.0 30.0 34.0 4 35.42222410495994 37.0 35.0 37.0 33.0 37.0 5 35.33321277483422 37.0 35.0 37.0 33.0 37.0 6 35.37779782339699 37.0 35.0 37.0 33.0 37.0 7 35.82095994942239 37.0 35.0 37.0 35.0 37.0 8 35.872965753317374 37.0 35.0 37.0 35.0 37.0 9 37.715043137634616 39.0 37.0 39.0 35.0 39.0 10 36.950707474294695 39.0 37.0 39.0 32.0 39.0 11 36.63499324350301 39.0 35.0 39.0 32.0 39.0 12 35.73460921247296 37.0 35.0 39.0 31.0 39.0 13 35.40411256366699 37.0 35.0 39.0 30.0 39.0 14 36.29898673903974 38.0 35.0 40.0 31.0 41.0 15 36.63005295555806 38.0 35.0 40.0 31.0 41.0 16 36.79474488350204 38.0 35.0 41.0 32.0 41.0 17 36.723569566288425 38.0 35.0 40.0 32.0 41.0 18 36.63424782175948 38.0 35.0 40.0 32.0 41.0 19 36.538841670143405 37.0 35.0 40.0 31.0 41.0 20 36.30885805945432 37.0 35.0 40.0 31.0 41.0 21 36.096994533573884 37.0 35.0 40.0 31.0 41.0 22 36.02323693874442 37.0 35.0 40.0 31.0 41.0 23 36.02035706199887 36.0 35.0 40.0 31.0 41.0 24 35.92756878598066 36.0 35.0 40.0 31.0 41.0 25 35.8185777324655 36.0 34.0 40.0 30.0 41.0 26 35.67788881183903 36.0 34.0 40.0 30.0 41.0 27 35.615660691426726 36.0 34.0 40.0 30.0 41.0 28 35.63520113571802 36.0 34.0 40.0 30.0 41.0 29 35.67329097648113 36.0 34.0 40.0 30.0 41.0 30 35.65964484605297 36.0 35.0 40.0 30.0 41.0 31 35.47387891275219 36.0 34.0 40.0 30.0 41.0 32 35.213027579892554 36.0 34.0 40.0 29.0 41.0 33 35.02658030121589 36.0 34.0 40.0 27.0 41.0 34 34.86381991977639 36.0 34.0 40.0 27.0 41.0 35 34.65892505485649 36.0 34.0 40.0 25.0 41.0 36 34.50779311022417 36.0 34.0 40.0 24.0 41.0 37 34.43070710407569 36.0 34.0 40.0 24.0 41.0 38 34.3784777448536 35.0 33.0 40.0 24.0 41.0 39 34.35889102318568 36.0 34.0 40.0 24.0 41.0 40 34.26232152951714 36.0 33.0 40.0 23.0 41.0 41 34.22178041171202 36.0 34.0 40.0 23.0 41.0 42 34.15013804897428 36.0 33.0 40.0 23.0 41.0 43 34.06764898111456 35.0 33.0 40.0 23.0 41.0 44 33.93955889828517 35.0 33.0 40.0 23.0 41.0 45 33.84087986820203 35.0 33.0 40.0 23.0 41.0 46 33.787706450496735 35.0 33.0 40.0 23.0 41.0 47 33.73168804206827 35.0 33.0 40.0 23.0 41.0 48 33.62299458768281 35.0 33.0 40.0 23.0 41.0 49 33.613518404868664 35.0 33.0 40.0 23.0 41.0 50 33.49061921977767 35.0 33.0 39.0 22.0 41.0 51 33.04967840783042 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 0.0 10 0.0 11 0.0 12 1.0 13 1.0 14 5.0 15 24.0 16 86.0 17 236.0 18 582.0 19 1242.0 20 2246.0 21 3642.0 22 5871.0 23 9022.0 24 14141.0 25 20669.0 26 27005.0 27 30511.0 28 31403.0 29 34457.0 30 40534.0 31 49422.0 32 60817.0 33 79224.0 34 137101.0 35 227906.0 36 97518.0 37 111068.0 38 157318.0 39 262431.0 40 89.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.042009890543326 24.8272429932492 29.948795862660138 14.18195125354734 2 30.937138235507707 26.075308242926326 29.61438841954927 13.373165102016696 3 27.079527315755524 25.18970164619308 34.28270778186126 13.448063256190132 4 23.700638058229757 27.931102241676125 33.562062233816086 14.806197466278032 5 22.0916804668177 31.411659335855568 32.751852163004585 13.744808034322151 6 19.314397105456884 39.86639365387655 30.19791054084726 10.621298699819306 7 85.81028838637195 3.2216173729543622 9.191327762011827 1.7767664786618576 8 86.37672347629957 2.306678039035323 8.263573154565014 3.0530253301000876 9 82.67083115592342 3.773813270073346 10.868562282941305 2.6867932910619166 10 48.624493974685564 20.561180827781232 17.77862896508123 13.035696232451974 11 41.52134383806051 21.76061923401686 23.245055084317382 13.47298184360525 12 38.86865341377528 19.9132975549882 25.62955031205191 15.588498719184607 13 19.552903585001573 39.98158872369843 26.83197894877735 13.633528742522644 14 14.216267708216158 41.43590868120868 29.212060026741206 15.135763583833958 15 12.773908672665163 26.324351725149402 47.646190232768085 13.255549369417347 16 13.515699422031163 20.9933403295234 47.64497990137935 17.845980347066085 17 14.119227609225288 23.524072067402642 29.432696319311052 32.92400400406102 18 19.75275065607081 25.03015149077229 35.79441168639032 19.422686166766578 19 24.872381234452583 30.443394224868182 26.311038079873327 18.37318646080591 20 28.287366845748245 24.658579754430882 28.037540207920692 19.016513191900177 21 18.74091361508899 31.06201595643946 30.26376680758721 19.93330362088434 22 19.514600156346336 24.985582817281255 28.925069095683103 26.57474793068931 23 16.122753233364705 31.823314399953297 26.325206076717922 25.728726289964076 24 17.99741416258595 24.558051053201897 40.08510765541723 17.359427128794923 25 14.709157367287162 27.52201023228395 35.819757449589694 21.949074950839186 26 14.183659956684375 37.55615581663906 29.18108978238242 19.079094444294142 27 15.828286726082071 36.255975121282326 29.96153994022387 17.954198212411736 28 13.690912689541454 30.840169332480883 39.06266241579298 16.40625556218469 29 13.618933569893791 25.418596670591935 39.04493462074622 21.917535138768056 30 16.212887323843386 33.55081327149726 32.71710853255151 17.519190872107842 31 25.820640279543834 28.911114686730638 26.728460017058552 18.539785016666976 32 25.141288390643712 28.857717713698243 28.590448064680107 17.410545830977934 33 24.67374449477208 29.75927220637716 25.46793547367387 20.099047825176886 34 16.052696404746207 29.80590556282545 29.114521556002032 25.026876476426303 35 16.120759746371498 28.27796897849455 31.099393837562133 24.50187743757182 36 26.006604137624645 25.589395788331554 29.75542762431883 18.64857244972497 37 16.57563076064344 31.926334959923793 32.621705940733634 18.876328338699135 38 16.231327078530573 32.67659802901093 27.264708018231865 23.827366874226634 39 16.76152342276021 31.301234395624583 31.30415343015035 20.633088751464857 40 21.56753577953173 27.705126251803037 27.83569964985825 22.891638318806983 41 14.994581987136312 24.98280617468357 31.192233374674455 28.830378463505664 42 20.530993739026922 25.734493163051575 27.487266601830875 26.247246496090632 43 20.63828605684001 26.20901426339944 28.574072992950178 24.578626686810377 44 17.42179479329676 31.69551764449577 28.738037298141645 22.14465026406583 45 15.762786439162339 38.033453559584615 24.408539528711195 21.79522047254185 46 21.270007845795238 34.14181096901979 25.26089761023627 19.3272835749487 47 18.538574685278242 29.34939704138052 27.792483699684034 24.319544573657208 48 20.733403864801712 24.739956741332247 32.81607092257154 21.7105684712945 49 19.337179813950705 23.75253991601724 33.280624587953355 23.629655682078692 50 16.728346103516085 31.617985239652736 30.35924059536913 21.29442806146205 51 15.829924233255067 33.69206606415895 25.39659711770259 25.081412584883388 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1064.0 1 1272.0 2 1480.0 3 8116.5 4 14753.0 5 10994.0 6 7235.0 7 7657.0 8 8079.0 9 9248.5 10 10418.0 11 11059.0 12 11700.0 13 11684.5 14 11669.0 15 11095.0 16 10521.0 17 9679.0 18 8837.0 19 8559.5 20 8282.0 21 8466.0 22 8650.0 23 8670.5 24 8691.0 25 8655.5 26 10663.0 27 12706.0 28 14222.0 29 15738.0 30 17738.5 31 19739.0 32 24619.5 33 29500.0 34 35094.5 35 40689.0 36 41637.0 37 42585.0 38 53284.5 39 63984.0 40 82457.5 41 100931.0 42 124692.0 43 148453.0 44 152590.0 45 156727.0 46 161710.5 47 166694.0 48 158520.0 49 150346.0 50 133774.0 51 117202.0 52 99233.5 53 81265.0 54 65394.5 55 49524.0 56 40729.0 57 31934.0 58 26518.0 59 21102.0 60 18082.5 61 15063.0 62 12283.0 63 9503.0 64 7268.0 65 5033.0 66 3644.5 67 2256.0 68 1857.0 69 1458.0 70 1185.0 71 912.0 72 710.5 73 509.0 74 372.5 75 303.5 76 371.0 77 214.5 78 58.0 79 43.5 80 29.0 81 23.0 82 17.0 83 10.0 84 3.0 85 2.5 86 2.0 87 3.0 88 4.0 89 2.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1404574.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.322384598618083 #Duplication Level Percentage of deduplicated Percentage of total 1 77.1626493034897 21.854302302217253 2 10.11942737346642 5.732126279781992 3 3.5497222890195497 3.016097996636958 4 1.823501777620837 2.0658367464816436 5 1.056606179402119 1.4962803291151638 6 0.7252572499889193 1.2324608860273363 7 0.5481615845578436 1.0867670254024608 8 0.3931177579231816 0.8907225865957432 9 0.34315746752690585 0.874713399586634 >10 2.844868983335339 17.578655698672605 >50 0.8056317229997831 16.65386170849875 >100 0.6230604891373976 25.33929017210258 >500 0.002036977487163644 0.39309927253158244 >1k 0.0025462218589545555 1.0806443953193472 >5k 2.546221858954555E-4 0.7051412010298684 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9778 0.696154136414315 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3465 0.24669401540965444 No Hit GAGCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCT 1582 0.11263201511632707 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1358789212957096E-4 0.0 0.0 0.1117776635478088 0.0 2 2.1358789212957096E-4 0.0 0.0 0.3717141282694967 0.0 3 2.1358789212957096E-4 0.0 0.0 0.6193336912117126 0.0 4 2.1358789212957096E-4 0.0 0.0 1.1753029744249859 0.0 5 2.1358789212957096E-4 0.0 0.0 2.007726186017967 0.0 6 2.1358789212957096E-4 0.0 0.0 3.2305168684597607 0.0 7 2.1358789212957096E-4 0.0 0.0 3.7667648696330702 0.0 8 2.1358789212957096E-4 0.0 0.0 5.214463602487302 0.0 9 2.1358789212957096E-4 0.0 0.0 5.704007051248279 0.0 10 2.1358789212957096E-4 0.0 0.0 6.596804440349885 0.0 11 2.1358789212957096E-4 0.0 0.0 7.6726466530065345 0.0 12 2.1358789212957096E-4 0.0 0.0 8.454093554344592 0.0 13 2.1358789212957096E-4 0.0 0.0 8.840901226991244 0.0 14 2.1358789212957096E-4 0.0 0.0 8.982438803509107 0.0 15 2.1358789212957096E-4 0.0 0.0 9.184848929283897 0.0 16 2.1358789212957096E-4 0.0 0.0 9.664780922899043 0.0 17 2.1358789212957096E-4 0.0 0.0 10.24246497514549 0.0 18 2.1358789212957096E-4 0.0 0.0 10.91975218108836 0.0 19 2.1358789212957096E-4 0.0 0.0 11.297446770337483 0.0 20 2.1358789212957096E-4 0.0 0.0 11.650080380243406 0.0 21 2.1358789212957096E-4 0.0 0.0 12.207687170629672 0.0 22 2.1358789212957096E-4 0.0 0.0 12.758672736359921 0.0 23 2.1358789212957096E-4 0.0 0.0 13.490994422508177 0.0 24 2.1358789212957096E-4 0.0 0.0 13.945367065031817 0.0 25 2.8478385617276126E-4 0.0 0.0 14.348336221516275 0.0 26 2.8478385617276126E-4 0.0 0.0 14.710937266388243 0.0 27 2.8478385617276126E-4 0.0 0.0 15.07909159645558 0.0 28 2.8478385617276126E-4 0.0 0.0 15.48725805831519 0.0 29 2.8478385617276126E-4 0.0 0.0 15.905320759176805 0.0 30 2.8478385617276126E-4 0.0 0.0 16.401770216449968 0.0 31 2.8478385617276126E-4 0.0 0.0 16.861126576456634 0.0 32 2.8478385617276126E-4 0.0 0.0 17.279046885390162 0.0 33 2.8478385617276126E-4 0.0 0.0 17.715620536903003 0.0 34 2.8478385617276126E-4 0.0 0.0 18.103496149010304 0.0 35 2.8478385617276126E-4 0.0 0.0 18.568121010356165 0.0 36 2.8478385617276126E-4 0.0 0.0 18.99444244304679 0.0 37 2.8478385617276126E-4 0.0 0.0 19.427669884249603 0.0 38 2.8478385617276126E-4 0.0 0.0 19.85833427074686 0.0 39 2.8478385617276126E-4 0.0 0.0 20.28750354199921 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 30 2.165847E-6 45.000004 1 ATGTACG 30 2.165847E-6 45.000004 1 TCGTAAT 30 2.165847E-6 45.000004 30 CAATACG 30 2.165847E-6 45.000004 1 CTTAACG 20 7.033823E-4 45.0 1 CTCGTTG 35 1.2121927E-7 45.0 1 CGTATCG 20 7.033823E-4 45.0 33 CACGGTA 20 7.033823E-4 45.0 37 CTCCGAC 25 3.891249E-5 45.0 13 CGACGGT 100 0.0 45.0 28 CGGTTTA 20 7.033823E-4 45.0 37 TCTTACG 25 3.891249E-5 45.0 17 TTCACCG 20 7.033823E-4 45.0 29 CGTCTAC 20 7.033823E-4 45.0 17 CGACATC 20 7.033823E-4 45.0 21 ATCGTTA 20 7.033823E-4 45.0 19 ATACTCG 80 0.0 45.0 44 CCCGTTC 25 3.891249E-5 45.0 35 ACTACGC 25 3.891249E-5 45.0 21 GAACGCG 25 3.891249E-5 45.0 1 >>END_MODULE