##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547645_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2591832 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.293588087499497 31.0 31.0 33.0 30.0 34.0 2 31.701336737874986 31.0 31.0 34.0 30.0 34.0 3 31.694852521305393 31.0 31.0 34.0 30.0 34.0 4 35.55454172955655 37.0 35.0 37.0 33.0 37.0 5 35.487430126644014 37.0 35.0 37.0 33.0 37.0 6 35.538857070983 37.0 35.0 37.0 33.0 37.0 7 35.92122367499128 37.0 35.0 37.0 35.0 37.0 8 35.965753953188326 37.0 35.0 37.0 35.0 37.0 9 37.792083746168736 39.0 38.0 39.0 35.0 39.0 10 37.16100271931205 39.0 37.0 39.0 33.0 39.0 11 36.84928035459088 39.0 37.0 39.0 32.0 39.0 12 36.471915617987584 39.0 35.0 39.0 32.0 39.0 13 36.353387873905405 39.0 35.0 39.0 32.0 39.0 14 37.420332027693156 40.0 36.0 41.0 32.0 41.0 15 37.60711689646551 40.0 36.0 41.0 32.0 41.0 16 37.64728076511132 40.0 36.0 41.0 33.0 41.0 17 37.54213621870554 39.0 35.0 41.0 32.0 41.0 18 37.380190151213505 39.0 36.0 41.0 32.0 41.0 19 37.274494643171316 39.0 36.0 41.0 32.0 41.0 20 37.06376532120909 39.0 35.0 41.0 32.0 41.0 21 36.90572537108887 39.0 35.0 41.0 31.0 41.0 22 36.86280013519395 38.0 35.0 41.0 31.0 41.0 23 36.78715364267437 38.0 35.0 41.0 31.0 41.0 24 36.68014400624732 38.0 35.0 40.0 31.0 41.0 25 36.5752606650431 38.0 35.0 40.0 31.0 41.0 26 36.47821039326623 38.0 35.0 40.0 31.0 41.0 27 36.40414579340019 38.0 35.0 40.0 31.0 41.0 28 36.388125079094635 38.0 35.0 40.0 30.0 41.0 29 36.388112346787906 38.0 35.0 40.0 30.0 41.0 30 36.345412819966725 38.0 35.0 40.0 30.0 41.0 31 36.21985182681593 38.0 35.0 40.0 30.0 41.0 32 36.013950749894285 38.0 35.0 41.0 30.0 41.0 33 35.77732738850358 38.0 35.0 41.0 29.0 41.0 34 35.54604735183453 38.0 35.0 41.0 27.0 41.0 35 35.27469064352936 38.0 34.0 41.0 25.0 41.0 36 35.166297043944205 38.0 34.0 40.0 24.0 41.0 37 35.117996459647074 38.0 34.0 40.0 24.0 41.0 38 35.00985519123153 38.0 34.0 40.0 24.0 41.0 39 34.938695872263324 38.0 34.0 40.0 23.0 41.0 40 34.8734879421197 38.0 34.0 40.0 23.0 41.0 41 34.7731338296618 38.0 34.0 40.0 23.0 41.0 42 34.7298343411147 38.0 34.0 40.0 23.0 41.0 43 34.683089799030185 38.0 34.0 40.0 23.0 41.0 44 34.5557871806506 38.0 34.0 40.0 23.0 41.0 45 34.48072676006778 38.0 34.0 40.0 23.0 41.0 46 34.456336290315114 38.0 34.0 40.0 23.0 41.0 47 34.42037871281781 37.0 33.0 40.0 23.0 41.0 48 34.28008798409773 37.0 33.0 40.0 23.0 41.0 49 34.21541403918155 37.0 33.0 40.0 22.0 41.0 50 34.144862012661314 37.0 33.0 40.0 22.0 41.0 51 33.75453887443322 36.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 0.0 11 2.0 12 7.0 13 7.0 14 23.0 15 71.0 16 176.0 17 546.0 18 1169.0 19 2297.0 20 4233.0 21 6496.0 22 10386.0 23 15581.0 24 23777.0 25 36529.0 26 49604.0 27 55888.0 28 56391.0 29 58573.0 30 64705.0 31 75455.0 32 92060.0 33 117173.0 34 179190.0 35 258852.0 36 188740.0 37 239109.0 38 371207.0 39 683327.0 40 253.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.80000246929585 23.649989659823632 28.70494692557234 17.845060945308184 2 33.86488784766914 24.835328833041647 28.582369536297104 12.717413782992107 3 26.833375002700794 24.70727269360051 35.36679846533263 13.092553838366067 4 23.923502757894802 27.21908673093009 34.75510758413354 14.102302927041569 5 22.067248185839205 31.04036064065881 33.81006176326243 13.082329410239552 6 20.667041690973797 39.08447769762855 30.224104031434134 10.024376579963516 7 86.0122106679754 2.6390985218177723 10.018782081554669 1.3299087286521656 8 86.839849187756 2.0459659422369967 9.614280555221171 1.4999043147858349 9 82.19815173205671 4.76400476574099 10.918608922183228 2.119234580019075 10 38.19456662314533 37.01181249401967 15.9740291809037 8.819591701931298 11 27.30377586201575 23.53188786927548 32.59833199065372 16.56600427805506 12 28.71115874794354 22.21351538216983 31.78809429006201 17.28723157982462 13 22.26733831513771 28.066325286515486 31.975645026375165 17.69069137197164 14 16.429961509850948 31.3705132122761 33.03157766398439 19.167947613888554 15 16.12052787372021 27.069192756320625 40.2624861487936 16.54779322116557 16 19.699039135252594 25.090399377737445 38.65119344155023 16.559368045459735 17 19.765478626701114 25.21305393250797 32.00898052034237 23.012486920448545 18 20.827623086681545 25.73469268069844 35.065698702693695 18.37198552992632 19 23.136067461162607 27.653219807456658 30.90968087437766 18.30103185700308 20 24.516095179008516 26.53624926306952 31.619834927572466 17.327820630349496 21 21.964540911602295 26.660447127745933 33.55892665882666 17.81608530182512 22 22.04274814108322 23.71959293657922 33.13424635547366 21.103412566863902 23 18.92368023853398 27.587899215689905 32.74579525216141 20.74262529361471 24 18.868699823136684 26.324352812990963 37.09082996120119 17.71611740267116 25 18.74048935270496 27.911106892730704 33.93503128289179 19.413372471672545 26 18.0303738822578 31.315880041607635 31.2955083508499 19.358237725284663 27 17.655195244136195 30.301616771457407 33.45926742165387 18.583920562752525 28 16.70127539130623 28.29890208933295 36.85296732195605 18.146855197404772 29 17.543575355192775 25.719182416144253 36.535817136295876 20.2014250923671 30 18.8177320134947 28.092908799644423 34.237134196969556 18.85222498989132 31 22.427148055892513 27.229041079823073 31.902106309359556 18.441704554924858 32 22.54254905410536 27.650017439401935 31.176210495124685 18.63122301136802 33 21.973839353785277 28.242262615786828 31.024541714123444 18.75935631630445 34 19.056173393954545 28.41164087795814 31.820658129076268 20.71152759901105 35 19.282422626157867 28.40828417891283 32.045402634121345 20.263890560807955 36 22.38814089802117 28.21440587198553 30.312342775303335 19.085110454689964 37 19.859581948212693 29.93785862663938 31.676242904632705 18.526316520515216 38 19.00802212489081 30.243009577781276 30.420914627182626 20.328053670145287 39 19.494087579750538 30.24169776436127 30.795591689584818 19.46862296630337 40 22.314949425734383 27.540133774102642 30.239459964997735 19.905456835165243 41 18.511655076409273 27.113408585124343 31.5102213415067 22.864714996959677 42 20.190814836764112 27.405287071075595 29.864281326876124 22.53961676528417 43 20.603148660869994 28.13643013899049 29.905449118615714 21.3549720815238 44 19.21405399732699 30.278042712644954 29.866249047006132 20.64165424302192 45 18.20160411631618 31.913140975186664 28.62785859577318 21.257396312723973 46 20.309572534022266 30.788453881270083 29.21366045330099 19.688313131406666 47 19.635609098120558 28.666672839906287 30.898954870531732 20.79876319144142 48 20.229860577383104 26.901319221307553 32.25818648739579 20.610633713913558 49 19.855067766737967 26.938088579815357 31.7062216995546 21.500621953892075 50 18.45250772426608 29.535170489445306 31.977921408486353 20.034400377802264 51 18.068377888690314 29.812310365795312 30.593765336642193 21.525546408872177 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1491.0 1 2201.5 2 2912.0 3 26918.5 4 50925.0 5 36030.0 6 21135.0 7 20651.5 8 20168.0 9 20557.5 10 20947.0 11 21027.0 12 21107.0 13 20769.0 14 20431.0 15 19503.0 16 18575.0 17 17748.5 18 16922.0 19 16456.5 20 15991.0 21 15965.5 22 15940.0 23 18000.0 24 20060.0 25 22587.5 26 30296.0 27 35477.0 28 41206.0 29 46935.0 30 54714.0 31 62493.0 32 70407.5 33 78322.0 34 89292.0 35 100262.0 36 106971.0 37 113680.0 38 124593.5 39 135507.0 40 152021.0 41 168535.0 42 187837.0 43 207139.0 44 211350.5 45 215562.0 46 218219.5 47 220877.0 48 212500.5 49 204124.0 50 189368.0 51 174612.0 52 160160.5 53 145709.0 54 127983.5 55 110258.0 56 99274.5 57 88291.0 58 78347.5 59 68404.0 60 59913.5 61 51423.0 62 43127.0 63 34831.0 64 29136.5 65 23442.0 66 18739.5 67 14037.0 68 11286.0 69 8535.0 70 6902.0 71 5269.0 72 3973.0 73 2677.0 74 2228.0 75 1380.5 76 982.0 77 757.5 78 533.0 79 364.0 80 195.0 81 171.0 82 147.0 83 88.0 84 29.0 85 30.5 86 32.0 87 20.5 88 9.0 89 5.5 90 2.0 91 1.5 92 1.0 93 2.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2591832.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.721593302386406 #Duplication Level Percentage of deduplicated Percentage of total 1 77.44561226920665 16.822420927660136 2 7.2072327172143815 3.131051558379682 3 2.7326509453440444 1.7807259741643524 4 1.5376740364858306 1.3360292020873636 5 1.0224310882851524 1.1104416139723206 6 0.7324023494232981 0.9545367580731108 7 0.5463646242113958 0.8307537113351783 8 0.44474108333054363 0.772838794957505 9 0.3852034225691308 0.7530508875360556 >10 5.5856287390837425 30.283324046471687 >50 1.9808891626059082 30.189424804196673 >100 0.37664182064208795 10.244035493983242 >500 0.001624976741533665 0.26512031911190653 >1k 7.222118851260733E-4 0.28347480274273085 >5k 0.0 0.0 >10k+ 1.8055297128151832E-4 1.2427711053281205 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31688 1.2226101074452358 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1574824294167214E-4 0.0 0.0 0.028898477987770812 0.0 2 1.1574824294167214E-4 0.0 0.0 0.08565369977683739 0.0 3 1.1574824294167214E-4 0.0 0.0 0.1654042391636495 0.0 4 1.1574824294167214E-4 0.0 0.0 0.28130681309591055 0.0 5 1.1574824294167214E-4 0.0 0.0 0.5000324095080236 0.0 6 1.1574824294167214E-4 0.0 0.0 0.928378073887505 0.0 7 1.1574824294167214E-4 0.0 0.0 1.166896619842644 0.0 8 1.1574824294167214E-4 0.0 0.0 1.679005429364249 0.0 9 1.1574824294167214E-4 0.0 0.0 1.9527886066689508 0.0 10 1.1574824294167214E-4 0.0 0.0 2.303660113772806 0.0 11 1.1574824294167214E-4 0.0 0.0 2.6006315224134897 0.0 12 1.543309905888962E-4 0.0 0.0 2.853464267745749 0.0 13 1.543309905888962E-4 0.0 0.0 2.9866133298763193 0.0 14 1.543309905888962E-4 0.0 0.0 3.066363869263131 0.0 15 1.543309905888962E-4 0.0 0.0 3.136738800971668 0.0 16 1.543309905888962E-4 0.0 0.0 3.2518697199509843 0.0 17 1.543309905888962E-4 0.0 0.0 3.3913077699480523 0.0 18 1.543309905888962E-4 0.0 0.0 3.563155327968788 0.0 19 1.543309905888962E-4 0.0 0.0 3.6802153843304657 0.0 20 1.543309905888962E-4 0.0 0.0 3.800902218970983 0.0 21 1.543309905888962E-4 0.0 0.0 3.964724565481096 0.0 22 1.543309905888962E-4 0.0 0.0 4.13923433308949 0.0 23 1.543309905888962E-4 0.0 0.0 4.334463036184444 0.0 24 1.543309905888962E-4 0.0 0.0 4.479611332833301 0.0 25 1.543309905888962E-4 0.0 0.0 4.610754092086215 0.0 26 1.543309905888962E-4 0.0 0.0 4.733871639828507 0.0 27 1.543309905888962E-4 0.0 0.0 4.86281518246553 0.0 28 1.543309905888962E-4 0.0 0.0 5.000131181342001 0.0 29 1.543309905888962E-4 0.0 0.0 5.162024390469752 0.0 30 1.543309905888962E-4 0.0 0.0 5.3771232086030265 0.0 31 1.9291373823612025E-4 0.0 0.0 5.55344636535084 0.0 32 1.9291373823612025E-4 0.0 0.0 5.733512048620435 0.0 33 1.9291373823612025E-4 0.0 0.0 5.907134413032943 0.0 34 1.9291373823612025E-4 0.0 0.0 6.089862305890197 0.0 35 2.3149648588334428E-4 0.0 0.0 6.299791035838743 0.0 36 2.3149648588334428E-4 0.0 0.0 6.4929362705607465 0.0 37 2.3149648588334428E-4 0.0 0.0 6.691676003691597 0.0 38 2.3149648588334428E-4 0.0 0.0 6.915764602026675 0.0 39 2.3149648588334428E-4 0.0 0.0 7.2002737831773045 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCACG 35 1.2127202E-7 45.000004 14 CGTTAAC 20 7.034928E-4 45.0 13 CGTTTTT 18745 0.0 43.667645 1 CGACGGT 220 0.0 41.93182 28 CGCATCG 70 0.0 41.785717 21 ACGGGTA 185 0.0 41.351353 5 TACGGGA 1025 0.0 39.95122 4 ATAGGGA 4540 0.0 38.854626 4 TAGGGAT 5340 0.0 38.679775 5 TAGGGAC 3330 0.0 38.58108 5 TCGCGCG 35 6.2513245E-6 38.57143 1 GGGCGAT 3705 0.0 38.441296 7 CGCATTA 65 9.094947E-12 38.07692 27 GTTAGCG 130 0.0 38.07692 1 CGGTCTA 245 0.0 37.65306 31 TTAGGGA 4190 0.0 37.5895 4 CTACGGG 450 0.0 37.5 3 TCGACGG 150 0.0 37.5 2 AGTCCGC 30 1.1403173E-4 37.499996 11 TCGCGCA 295 0.0 37.372883 34 >>END_MODULE