##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547644_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1340582 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.259403751504944 31.0 31.0 33.0 30.0 34.0 2 31.64574565375337 31.0 31.0 34.0 30.0 34.0 3 31.71829250280848 31.0 31.0 34.0 30.0 34.0 4 35.5060212653907 37.0 35.0 37.0 33.0 37.0 5 35.41079471453443 37.0 35.0 37.0 33.0 37.0 6 35.462713209635815 37.0 35.0 37.0 33.0 37.0 7 35.862690234539926 37.0 35.0 37.0 35.0 37.0 8 35.90367318075284 37.0 35.0 37.0 35.0 37.0 9 37.758492207116014 39.0 37.0 39.0 35.0 39.0 10 37.14842732484846 39.0 37.0 39.0 33.0 39.0 11 36.71212055659408 39.0 35.0 39.0 32.0 39.0 12 35.38713782521323 35.0 35.0 39.0 31.0 39.0 13 34.83020658191741 35.0 34.0 39.0 29.0 39.0 14 35.66781890253636 36.0 34.0 40.0 29.0 41.0 15 36.124378068629895 36.0 35.0 40.0 31.0 41.0 16 36.37900404451201 36.0 35.0 40.0 32.0 41.0 17 36.32125077018787 36.0 35.0 40.0 32.0 41.0 18 36.243231671020496 36.0 35.0 40.0 31.0 41.0 19 36.130753657739696 36.0 35.0 40.0 31.0 41.0 20 35.889757582900565 36.0 35.0 40.0 31.0 41.0 21 35.64406653229717 35.0 34.0 40.0 30.0 41.0 22 35.56593479548435 35.0 34.0 40.0 30.0 41.0 23 35.611405344842765 35.0 34.0 40.0 31.0 41.0 24 35.47414704956504 35.0 34.0 40.0 30.0 41.0 25 35.390701948855046 35.0 34.0 40.0 30.0 41.0 26 35.25361223707315 35.0 34.0 40.0 30.0 41.0 27 35.224426405844625 35.0 34.0 40.0 30.0 41.0 28 35.255810536020924 35.0 34.0 40.0 30.0 41.0 29 35.35128101078487 36.0 34.0 40.0 30.0 41.0 30 35.376787096947446 36.0 34.0 40.0 30.0 41.0 31 35.14560392426573 35.0 34.0 40.0 30.0 41.0 32 34.9166265099785 35.0 34.0 40.0 29.0 41.0 33 34.7413593498943 35.0 34.0 40.0 27.0 41.0 34 34.61586385614606 35.0 34.0 40.0 27.0 41.0 35 34.44066756080568 35.0 34.0 40.0 27.0 41.0 36 34.25470131629397 35.0 33.0 40.0 24.0 41.0 37 34.19496606697688 35.0 33.0 40.0 24.0 41.0 38 34.16612635407606 35.0 33.0 40.0 24.0 41.0 39 34.17167319865551 35.0 33.0 40.0 24.0 41.0 40 34.017179105791364 35.0 33.0 40.0 23.0 41.0 41 34.0065687887798 35.0 34.0 40.0 23.0 41.0 42 33.95831288201691 35.0 33.0 40.0 23.0 41.0 43 33.87349225933214 35.0 33.0 40.0 23.0 41.0 44 33.74724037768671 35.0 33.0 40.0 23.0 41.0 45 33.63582608150788 35.0 33.0 39.0 23.0 41.0 46 33.59770980066867 35.0 33.0 39.0 23.0 41.0 47 33.55619275807075 35.0 33.0 39.0 23.0 41.0 48 33.49867147253954 35.0 33.0 39.0 23.0 41.0 49 33.515580546359715 35.0 33.0 39.0 23.0 41.0 50 33.37592030923882 35.0 33.0 39.0 23.0 41.0 51 32.91773125403743 35.0 32.0 38.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 2.0 13 4.0 14 9.0 15 27.0 16 102.0 17 305.0 18 761.0 19 1480.0 20 2513.0 21 4134.0 22 6240.0 23 9420.0 24 13577.0 25 19603.0 26 25749.0 27 29341.0 28 30874.0 29 34189.0 30 39894.0 31 47782.0 32 59491.0 33 78156.0 34 150121.0 35 265041.0 36 75197.0 37 86937.0 38 128744.0 39 230749.0 40 137.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.2069817437501 24.378963763499733 29.093259494756758 14.320794997993408 2 29.837936060606513 26.072258168467126 30.793341996237455 13.296463774688904 3 27.739892076724885 24.75797825123715 33.42757101020303 14.074558661834935 4 24.84458242763218 28.250192826697656 31.924865468878444 14.980359276791722 5 22.548788511258543 32.17498071733023 31.54682070921436 13.729410062196868 6 21.224065368623478 39.54349677975685 28.601308983710062 10.63112886790961 7 86.48310957479661 4.0998611051021125 7.855841716508204 1.5611876035930663 8 87.13424467880368 3.0586715322151123 7.146597522568555 2.6604862664126476 9 83.74056939448687 4.883998144089657 8.962674420512881 2.4127580409105893 10 56.67613021806947 22.010887808429473 12.641524352855699 8.671457620645363 11 52.19889570350787 16.745637342587024 20.499156336576206 10.556310617328892 12 48.625298564354885 19.45289433992102 20.991479819958794 10.930327275765302 13 19.536216359760164 48.876532729814365 20.398677589285846 11.188573321139625 14 11.584446158459535 49.011921687744575 25.595748712126525 13.807883441669363 15 9.742037413600958 23.94773314873689 54.22018198066213 12.090047457000018 16 10.873710075176305 18.4024550531038 53.17750051843154 17.546334353288348 17 12.323677328205212 19.380090139954138 28.198648049876844 40.09758448196381 18 20.307672339327247 23.36306171498648 36.78999121277177 19.53927473291451 19 28.07534339562966 26.932854536313332 24.922459051367245 20.069343016689768 20 31.625816249957104 23.335834734466072 26.25061353949255 18.78773547608427 21 18.19754405176259 30.725311842170044 29.82271878930196 21.254425316765406 22 20.8144671493426 24.828470022721476 26.18280716882667 28.174255659109253 23 16.09099629862254 31.686013984970707 24.580070447014805 27.642919269391953 24 18.057679425801627 22.665155880058062 43.542506165232716 15.734658528907595 25 12.611089810246595 26.4464240158379 38.054143648057334 22.88834252585817 26 13.220452012633318 39.51328602054928 27.80538601890821 19.46087594790919 27 14.399715944268982 38.54490064762916 30.61729905369459 16.438084354407266 28 12.094821502899487 30.393217274288332 42.51526575770822 14.996695465103963 29 11.384160014083436 23.711044904377353 42.509596578202604 22.395198503336612 30 16.031842886149448 33.31418742009068 34.18201945125326 16.471950242506615 31 29.82271878930196 27.800239000672843 24.63594170293201 17.741100507093186 32 29.890972726770908 27.94525064486917 26.5843491856522 15.579427442707718 33 27.427117475842582 28.800103238742576 23.356497401874705 20.416281883540133 34 16.524539341867936 29.931402927982028 28.22632259720032 25.31773513294972 35 16.705580113711807 27.332307908057846 32.43994026475068 23.52217171347967 36 30.14601121005653 23.608999673276234 28.548943667750276 17.696045448916962 37 16.101364929560443 33.03162357841594 33.95241768127574 16.914593810747867 38 16.727436292595304 34.768704935617514 24.831155423539926 23.672703348247254 39 17.372230866892142 33.468224994815685 30.607005017223866 18.552539121068314 40 23.786459910695505 27.557657793406147 25.476322970172653 23.179559325725695 41 14.497360101806528 22.793756741474972 31.486622974200756 31.22226018251774 42 22.05116882070623 22.761382742719206 26.468131005787036 28.719317430787523 43 21.85483618309063 24.908882858340633 27.368710008041287 25.86757095052746 44 16.888261963833617 33.501195749308884 27.84096757975267 21.769574707104823 45 14.82490440719031 42.507806310990304 21.37041971322903 21.29686956859036 46 22.410714152509883 35.50346043733244 24.112288543334166 17.973536866823515 47 19.441481386442604 28.770041668469364 27.631804693782254 24.15667225130578 48 22.106517915353184 23.176053385768274 34.017762434524705 20.69966626435384 49 19.631921061151054 22.441447072987703 34.499568098035034 23.427063767826212 50 17.236991097896286 33.85417676800076 29.219697116625465 19.689135017477483 51 15.27090472645463 35.181510716987106 25.46796838984859 24.079616166709684 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 911.0 1 1130.5 2 1350.0 3 6537.0 4 11724.0 5 8534.5 6 5345.0 7 5991.0 8 6637.0 9 7576.0 10 8515.0 11 8811.0 12 9107.0 13 9006.0 14 8905.0 15 8356.0 16 7807.0 17 7419.5 18 7032.0 19 6543.5 20 6055.0 21 5764.0 22 5473.0 23 5582.5 24 5692.0 25 6545.5 26 8128.5 27 8858.0 28 10702.5 29 12547.0 30 15163.0 31 17779.0 32 22745.0 33 27711.0 34 31781.5 35 35852.0 36 37929.5 37 40007.0 38 47128.5 39 54250.0 40 80989.0 41 107728.0 42 137021.5 43 166315.0 44 171055.5 45 175796.0 46 166895.5 47 157995.0 48 144679.0 49 131363.0 50 114603.5 51 97844.0 52 83625.0 53 69406.0 54 57910.0 55 46414.0 56 38313.0 57 30212.0 58 25374.0 59 20536.0 60 18633.0 61 16730.0 62 14274.0 63 11818.0 64 9928.0 65 8038.0 66 6434.5 67 4831.0 68 3670.0 69 2509.0 70 1901.0 71 1293.0 72 1323.0 73 1353.0 74 961.0 75 517.5 76 466.0 77 321.5 78 177.0 79 158.0 80 139.0 81 100.5 82 62.0 83 41.5 84 21.0 85 12.5 86 4.0 87 3.5 88 3.0 89 3.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1340582.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.58874549043267 #Duplication Level Percentage of deduplicated Percentage of total 1 79.84255854124854 14.841730000282402 2 8.658720549743448 3.2190950514392047 3 2.9363606118597483 1.6374978024597604 4 1.3963449398082177 1.0382520281179395 5 0.8129938668094557 0.7556268037701844 6 0.5117054105579544 0.5707176985763504 7 0.3779132861010874 0.4917453724950327 8 0.2859370507238185 0.42521688497519994 9 0.2223127793224678 0.3719264106686469 >10 2.2269807670494655 10.045129215336344 >50 1.144085317478373 15.544173565284872 >100 1.5731173112694605 48.31825641381696 >500 0.008125605946639775 1.017362391156007 >1k 0.0020314014866599436 0.6389951148074364 >5k 8.125605946639774E-4 1.0842752468136585 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8250 0.6154043542282381 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6107 0.4555484110632546 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2419 0.18044401610643734 No Hit GAGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCT 1885 0.14061057063275503 No Hit AAGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCT 1751 0.13061491203074485 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08227769729863596 0.0 2 0.0 0.0 0.0 0.3250826879668681 0.0 3 0.0 0.0 0.0 0.4950834786682202 0.0 4 0.0 0.0 0.0 1.0296274304742268 0.0 5 0.0 0.0 0.0 1.6253388453671613 0.0 6 0.0 0.0 0.0 2.386799166332235 0.0 7 0.0 0.0 0.0 2.704422407581185 0.0 8 0.0 0.0 0.0 3.6082835663913135 0.0 9 0.0 0.0 0.0 3.85795124804003 0.0 10 0.0 0.0 0.0 4.338637994542669 0.0 11 0.0 0.0 0.0 4.917938626656183 0.0 12 0.0 0.0 0.0 5.380797295502998 0.0 13 0.0 0.0 0.0 5.563777523493528 0.0 14 0.0 0.0 0.0 5.635313617518362 0.0 15 0.0 0.0 0.0 5.74735450722149 0.0 16 0.0 0.0 0.0 6.010300004028101 0.0 17 0.0 0.0 0.0 6.293087629104374 0.0 18 0.0 0.0 0.0 6.68291831458277 0.0 19 0.0 0.0 0.0 6.860303957534862 0.0 20 0.0 0.0 0.0 7.044999858270512 0.0 21 0.0 0.0 0.0 7.313092373312487 0.0 22 0.0 0.0 0.0 7.551869262753043 0.0 23 0.0 0.0 0.0 7.836745532910333 0.0 24 0.0 0.0 0.0 8.03986626703924 0.0 25 0.0 0.0 0.0 8.206361117783171 0.0 26 0.0 0.0 0.0 8.374422452337866 0.0 27 0.0 0.0 0.0 8.527341110055184 0.0 28 0.0 0.0 0.0 8.686376514081198 0.0 29 0.0 0.0 0.0 8.873832410102478 0.0 30 0.0 0.0 0.0 9.110446059994839 0.0 31 0.0 0.0 0.0 9.34512025374054 0.0 32 0.0 0.0 0.0 9.525489675379797 0.0 33 0.0 0.0 0.0 9.704367207675473 0.0 34 0.0 0.0 0.0 9.904131190781317 0.0 35 0.0 0.0 0.0 10.168568576931511 0.0 36 0.0 0.0 0.0 10.37526984548502 0.0 37 0.0 0.0 0.0 10.582344086374425 0.0 38 0.0 0.0 0.0 10.770471332600318 0.0 39 0.0 0.0 0.0 10.97873908496459 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTGATC 90 0.0 45.000004 16 CGGGTAC 25 3.8911538E-5 45.000004 6 CCTTATG 25 3.8911538E-5 45.000004 27 TCGTTAG 25 3.8911538E-5 45.000004 1 ATTAGAC 25 3.8911538E-5 45.000004 38 ACGTTAG 50 2.1827873E-11 45.000004 1 CCGGATA 50 2.1827873E-11 45.000004 20 CCGTGTA 25 3.8911538E-5 45.000004 31 CACGCAT 25 3.8911538E-5 45.000004 33 GTTAGCG 115 0.0 45.000004 1 TTCCGTA 25 3.8911538E-5 45.000004 28 TGACGTG 25 3.8911538E-5 45.000004 29 TCTAGTT 25 3.8911538E-5 45.000004 28 AGGCGAT 45 3.8562575E-10 45.000004 6 AGGCGAC 25 3.8911538E-5 45.000004 22 CTGACGT 25 3.8911538E-5 45.000004 28 AACGGTC 25 3.8911538E-5 45.000004 26 CACCTAG 25 3.8911538E-5 45.000004 1 CCCGTAT 25 3.8911538E-5 45.000004 42 AGTGCCG 25 3.8911538E-5 45.000004 15 >>END_MODULE