##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547643_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1501924 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.345480197400136 31.0 31.0 33.0 30.0 34.0 2 31.75860163363792 31.0 31.0 34.0 30.0 34.0 3 31.90236789611192 31.0 31.0 34.0 30.0 34.0 4 35.67204066251022 37.0 35.0 37.0 33.0 37.0 5 35.58803508033695 37.0 35.0 37.0 33.0 37.0 6 35.624753316412814 37.0 35.0 37.0 33.0 37.0 7 35.91787866762899 37.0 35.0 37.0 35.0 37.0 8 35.93149054146548 37.0 35.0 37.0 35.0 37.0 9 37.74115401311917 39.0 37.0 39.0 35.0 39.0 10 37.17817812352689 39.0 37.0 39.0 33.0 39.0 11 36.89933844854999 39.0 37.0 39.0 33.0 39.0 12 36.350756762659096 38.0 35.0 39.0 32.0 39.0 13 36.162652038318846 38.0 35.0 39.0 32.0 39.0 14 37.19260894692408 39.0 35.0 41.0 32.0 41.0 15 37.395221063116374 39.0 35.0 41.0 32.0 41.0 16 37.48463570726614 39.0 35.0 41.0 33.0 41.0 17 37.39134470186241 39.0 35.0 41.0 32.0 41.0 18 37.299484527845614 39.0 35.0 41.0 32.0 41.0 19 37.270435787696314 39.0 35.0 41.0 32.0 41.0 20 37.12802711721765 39.0 35.0 41.0 32.0 41.0 21 36.94697268303855 39.0 35.0 41.0 32.0 41.0 22 36.88528514092591 39.0 35.0 41.0 31.0 41.0 23 36.827192321315856 38.0 35.0 41.0 31.0 41.0 24 36.74125455082947 38.0 35.0 41.0 31.0 41.0 25 36.63616334781254 38.0 35.0 40.0 31.0 41.0 26 36.52952080131884 38.0 35.0 40.0 31.0 41.0 27 36.44843281018214 38.0 35.0 40.0 31.0 41.0 28 36.46234762877482 38.0 35.0 40.0 31.0 41.0 29 36.466989008764756 38.0 35.0 40.0 31.0 41.0 30 36.47881517307134 38.0 35.0 40.0 31.0 41.0 31 36.414715391724215 38.0 35.0 41.0 30.0 41.0 32 36.3010438610742 38.0 35.0 41.0 30.0 41.0 33 36.18907081849681 38.0 35.0 41.0 30.0 41.0 34 36.093763066573274 38.0 35.0 41.0 30.0 41.0 35 35.92782191375862 38.0 35.0 41.0 29.0 41.0 36 35.829722409389554 38.0 35.0 41.0 29.0 41.0 37 35.80242808557557 38.0 35.0 41.0 29.0 41.0 38 35.715311160884305 38.0 35.0 40.0 29.0 41.0 39 35.66078310220757 38.0 35.0 40.0 29.0 41.0 40 35.58380983325388 38.0 35.0 40.0 28.0 41.0 41 35.49789936108618 38.0 34.0 40.0 28.0 41.0 42 35.46784990452247 38.0 34.0 40.0 27.0 41.0 43 35.42727461575952 38.0 34.0 40.0 27.0 41.0 44 35.29270322599545 38.0 34.0 40.0 27.0 41.0 45 35.197539289604535 38.0 34.0 40.0 27.0 41.0 46 35.16793326426637 37.0 34.0 40.0 27.0 41.0 47 35.132219739480824 37.0 34.0 40.0 27.0 41.0 48 35.015452845816434 37.0 34.0 40.0 26.0 41.0 49 34.956648938295146 37.0 34.0 40.0 26.0 41.0 50 34.866918698948815 37.0 34.0 40.0 26.0 41.0 51 34.443036398646 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 3.0 13 5.0 14 22.0 15 34.0 16 77.0 17 220.0 18 512.0 19 1054.0 20 1757.0 21 3011.0 22 4589.0 23 6928.0 24 10326.0 25 14896.0 26 19898.0 27 23325.0 28 25808.0 29 29822.0 30 34985.0 31 43519.0 32 53986.0 33 70862.0 34 117173.0 35 175505.0 36 108699.0 37 140553.0 38 216706.0 39 397507.0 40 138.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.688522188872405 24.17951907020595 28.62601569719906 13.505943043722585 2 31.30584503610036 26.119697135141323 29.157800261531207 13.416657567227103 3 29.301748956671574 24.82921905502542 31.918326093730442 13.950705894572563 4 25.69990225870284 28.482865977239864 30.974070592120505 14.843161171936794 5 23.151304593308318 32.82090172338947 29.686255762608493 14.341537920693723 6 22.323166818028074 40.36036443921264 27.43960413443024 9.87686460832905 7 88.19327742282566 3.6360028869636545 6.432549183580527 1.7381705066301625 8 88.20093426831185 3.361288587172187 6.468769391793459 1.969007752722508 9 82.69526287615085 6.182270208079769 8.195554502091984 2.92691241367739 10 42.38809686775096 32.45397237143823 14.36011409365587 10.79781666715493 11 34.52511578482 24.033972424703247 26.349868568582696 15.09104322189405 12 34.32111078856187 22.51179154204873 26.946836191445104 16.22026147794429 13 23.202838492493626 31.997824124256617 27.389801348137453 17.409536035112296 14 18.307584138744705 33.78100356609256 29.39556195919367 18.515850335969063 15 17.16172056642014 27.151706744149507 38.90915918515184 16.777413504278513 16 20.22652278011404 24.88028688535505 37.244094907598516 17.649095426932387 17 20.18757274003212 24.652645539987375 29.396028028049354 25.76375369193115 18 22.645486722364115 25.946585845888343 32.438458936670564 18.96946849507698 19 25.759758816025315 27.944023798807393 26.850626263379507 19.445591121787785 20 27.414369834958357 26.536895342241017 28.76989781107433 17.278837011726292 21 23.728297836641534 27.64314306183269 30.069231199448176 18.5593279020776 22 23.475089285476493 25.245351961883557 28.661902999086504 22.617655753553443 23 21.031423693875322 28.14183673741148 28.775623799872697 22.0511157688405 24 20.505032212016054 25.465070136704654 35.491276522646956 18.53862112863234 25 19.611644796940457 28.389119555982862 32.053685805673254 19.945549841403427 26 18.92133024041163 32.54052801606473 27.720177585550264 20.817964157973375 27 18.11616300158996 32.71217451748557 30.36445252888961 18.807209952034857 28 17.389761399378397 29.266660629965298 34.84623722638429 18.497340744272016 29 18.315307565495992 26.190073532349174 34.62711828294907 20.867500619205764 30 19.544397719192183 30.194736884156587 31.551729648104697 18.709135748546533 31 24.947800288163716 28.46329108530125 27.534881924784475 19.054026701750555 32 25.337700176573513 27.651665463765145 28.35682764241067 18.653806717250674 33 24.240574090300175 28.670025913428375 27.373755263249006 19.715644733022444 34 19.43214170623813 28.274000548629623 29.964432288185023 22.32942545694722 35 20.154548432543855 28.05168570446973 30.649020855915477 21.14474500707093 36 25.00765684548619 27.670907449378262 28.36142174970238 18.960013955433162 37 20.63413328503972 30.992513602552457 29.709359461597256 18.66399365081056 38 19.893949360953016 31.380615796804634 27.80147331023407 20.923961532008278 39 19.87610558190694 30.496216852517172 29.380914080872266 20.24676348470362 40 23.079263664473036 27.553857585337205 28.389918531164028 20.97696021902573 41 18.86140710182406 25.94651926462324 30.769200039416113 24.422873594136586 42 21.211792341023912 26.490022131612516 27.824177521632254 24.474008005731314 43 21.109590099099552 27.339199586663504 28.26794165350577 23.283268660731167 44 19.599726750488042 29.760360710661793 29.135162631398124 21.50474990745204 45 18.650411072730712 33.27578492653423 26.932987288304865 21.140816712430187 46 21.07450177239328 31.427422426168032 27.358707897337016 20.13936790410167 47 19.792612675474924 28.16727078067865 30.236083849782013 21.80403269406441 48 21.080227761191644 27.2554403551711 31.72983453223998 19.934497351397273 49 20.816699113936522 27.423158561951205 30.502808397761804 21.25733392635047 50 19.58214929650235 30.609937653303366 29.923285066354886 19.884627983839394 51 18.625509679584322 30.876795363813347 28.193037730271303 22.304657226331027 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 797.0 1 1492.0 2 2187.0 3 7472.0 4 12757.0 5 9298.5 6 5840.0 7 5874.0 8 5908.0 9 6280.5 10 6653.0 11 6716.5 12 6780.0 13 6516.5 14 6253.0 15 6274.5 16 6296.0 17 6216.5 18 6137.0 19 6257.0 20 6377.0 21 7097.0 22 7817.0 23 8553.0 24 9289.0 25 11088.0 26 15403.0 27 17919.0 28 22280.0 29 26641.0 30 31155.0 31 35669.0 32 40361.0 33 45053.0 34 52646.0 35 60239.0 36 63954.0 37 67669.0 38 73563.0 39 79457.0 40 91834.0 41 104211.0 42 115789.0 43 127367.0 44 128917.5 45 130468.0 46 126961.0 47 123454.0 48 120279.5 49 117105.0 50 109617.5 51 102130.0 52 93650.5 53 85171.0 54 77274.0 55 69377.0 56 61086.0 57 52795.0 58 48158.5 59 43522.0 60 38569.0 61 33616.0 62 29949.0 63 26282.0 64 22769.5 65 19257.0 66 16708.0 67 14159.0 68 11947.0 69 9735.0 70 7673.5 71 5612.0 72 4929.0 73 4246.0 74 3306.5 75 1812.5 76 1258.0 77 917.0 78 576.0 79 489.5 80 403.0 81 248.5 82 94.0 83 72.5 84 51.0 85 34.0 86 17.0 87 11.5 88 6.0 89 5.0 90 4.0 91 9.0 92 14.0 93 7.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1501924.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.565209688235154 #Duplication Level Percentage of deduplicated Percentage of total 1 77.21016247499749 15.106330188860309 2 6.594159287934091 2.580322183721078 3 2.332330354990268 1.3689759737286158 4 1.285651510416868 1.0061616554920905 5 0.8903515510253139 0.8709957396027833 6 0.6814602756992002 0.7999747912954432 7 0.525555866376097 0.7197827509971302 8 0.4546685645020535 0.7116548642505238 9 0.4118277895429387 0.7251747352064973 >10 6.888391715232337 33.73198967020451 >50 2.3565322044499237 32.64031383357533 >100 0.3678740822030225 8.972767771076468 >500 0.0 0.0 >1k 6.895484202488529E-4 0.2768385915520293 >5k 3.4477421012442643E-4 0.4887172504372446 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7245 0.48238126562995204 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2471 0.16452230605543292 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1633 0.10872720590389394 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.024568486820904387 0.0 2 0.0 0.0 0.0 0.0786990553450108 0.0 3 0.0 0.0 0.0 0.12623807862448433 0.0 4 0.0 0.0 0.0 0.22411253831751807 0.0 5 0.0 0.0 0.0 0.38184355533302616 0.0 6 0.0 0.0 0.0 0.6094849007007013 0.0 7 0.0 0.0 0.0 0.7237383516076712 0.0 8 0.0 0.0 0.0 1.0051773591739661 0.0 9 0.0 0.0 0.0 1.11563567797039 0.0 10 0.0 0.0 0.0 1.3185087927218688 0.0 11 0.0 0.0 0.0 1.5444856064621113 0.0 12 0.0 0.0 0.0 1.7383702504254543 0.0 13 0.0 0.0 0.0 1.8213305067366925 0.0 14 0.0 0.0 0.0 1.8566185772382624 0.0 15 0.0 0.0 0.0 1.9126800024501907 0.0 16 0.0 0.0 0.0 2.02966328522615 0.0 17 0.0 0.0 0.0 2.1664212037360078 0.0 18 0.0 0.0 0.0 2.327481284006381 0.0 19 0.0 0.0 0.0 2.421627192853966 0.0 20 0.0 0.0 0.0 2.5289561921908166 0.0 21 0.0 0.0 0.0 2.667112317267718 0.0 22 0.0 0.0 0.0 2.8163209323507714 0.0 23 0.0 0.0 0.0 2.9793784505740635 0.0 24 0.0 0.0 0.0 3.1059494355240345 0.0 25 0.0 0.0 0.0 3.218804679863961 0.0 26 0.0 0.0 0.0 3.332192574324666 0.0 27 0.0 0.0 0.0 3.4494421821610146 0.0 28 6.658126509730186E-5 0.0 0.0 3.5613652887895793 0.0 29 6.658126509730186E-5 0.0 0.0 3.693196193682237 0.0 30 6.658126509730186E-5 0.0 0.0 3.8668401330560003 0.0 31 6.658126509730186E-5 0.0 0.0 4.017380373441 0.0 32 6.658126509730186E-5 0.0 0.0 4.162727275148409 0.0 33 6.658126509730186E-5 0.0 0.0 4.308007595590722 0.0 34 6.658126509730186E-5 0.0 0.0 4.471398020139501 0.0 35 6.658126509730186E-5 0.0 0.0 4.655095730542957 0.0 36 6.658126509730186E-5 0.0 0.0 4.819817780393682 0.0 37 6.658126509730186E-5 0.0 0.0 4.986004618076547 0.0 38 6.658126509730186E-5 0.0 0.0 5.170368141130976 0.0 39 6.658126509730186E-5 0.0 0.0 5.427704730732048 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTAG 40 6.8175723E-9 45.0 1 GTTACGC 20 7.0339796E-4 45.0 37 CGACGGT 180 0.0 41.25 28 CGTTTTT 4615 0.0 40.173347 1 CACGACG 185 0.0 40.135136 26 GACGGTC 185 0.0 40.135136 29 ACGGGAC 495 0.0 40.0 5 GGGCGTA 40 3.4591721E-7 39.375 7 TCACGAC 190 0.0 39.078945 25 TACGGGA 445 0.0 38.426964 4 GGCGATA 510 0.0 38.382355 8 TCGTCCC 805 0.0 38.291927 38 GGGCGAT 2190 0.0 38.116436 7 GCTACGA 390 0.0 38.076923 10 TAGGGAC 1390 0.0 38.03957 5 CTACGGG 255 0.0 37.941177 3 TATGGGA 1830 0.0 37.745903 4 AACCCGC 60 1.5643309E-10 37.499996 21 CGTGATA 30 1.14008886E-4 37.499996 43 CGCGACG 30 1.14008886E-4 37.499996 15 >>END_MODULE