##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547641_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1627766 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30156914445934 31.0 31.0 33.0 30.0 34.0 2 31.693237234344494 31.0 31.0 34.0 30.0 34.0 3 31.607209512915247 31.0 31.0 34.0 30.0 34.0 4 35.53172384728518 37.0 35.0 37.0 33.0 37.0 5 35.50032989999791 37.0 35.0 37.0 33.0 37.0 6 35.56275349159523 37.0 35.0 37.0 33.0 37.0 7 35.91341814486849 37.0 35.0 37.0 35.0 37.0 8 35.943061840583965 37.0 35.0 37.0 35.0 37.0 9 37.75458819019441 39.0 37.0 39.0 35.0 39.0 10 37.15992716397812 39.0 37.0 39.0 33.0 39.0 11 36.89209566977072 39.0 37.0 39.0 33.0 39.0 12 36.43624513597163 39.0 35.0 39.0 32.0 39.0 13 36.293757825141945 39.0 35.0 39.0 32.0 39.0 14 37.36965325482901 39.0 35.0 41.0 32.0 41.0 15 37.54119203865912 40.0 35.0 41.0 32.0 41.0 16 37.59141854541746 40.0 35.0 41.0 33.0 41.0 17 37.48393995205699 39.0 35.0 41.0 32.0 41.0 18 37.278434369559264 39.0 36.0 41.0 32.0 41.0 19 37.11626363985978 38.0 35.0 41.0 32.0 41.0 20 36.870638040111416 38.0 35.0 41.0 32.0 41.0 21 36.71110282436173 38.0 35.0 41.0 31.0 41.0 22 36.6631905323001 38.0 35.0 40.0 31.0 41.0 23 36.59035573909272 38.0 35.0 40.0 31.0 41.0 24 36.467545089404744 38.0 35.0 40.0 31.0 41.0 25 36.348805663713335 38.0 35.0 40.0 31.0 41.0 26 36.22156870213532 38.0 35.0 40.0 31.0 41.0 27 36.13652085127715 38.0 35.0 40.0 31.0 41.0 28 36.0860412368854 38.0 35.0 40.0 30.0 41.0 29 36.04619644346915 38.0 35.0 40.0 30.0 41.0 30 35.94573482920764 38.0 35.0 40.0 30.0 41.0 31 35.7928406171403 38.0 35.0 40.0 30.0 41.0 32 35.50674912733157 38.0 34.0 40.0 28.0 41.0 33 35.19189920418537 38.0 34.0 40.0 26.0 41.0 34 34.8710244592896 38.0 34.0 40.0 24.0 41.0 35 34.548612638425915 37.0 34.0 40.0 23.0 41.0 36 34.40830684508707 37.0 34.0 40.0 22.0 41.0 37 34.34602270842369 37.0 33.0 40.0 22.0 41.0 38 34.23828240668499 37.0 33.0 40.0 21.0 41.0 39 34.1466138253287 37.0 33.0 40.0 21.0 41.0 40 34.07419801126206 37.0 33.0 40.0 21.0 41.0 41 33.958957245697476 37.0 33.0 40.0 20.0 41.0 42 33.90352605964248 37.0 33.0 40.0 20.0 41.0 43 33.84064355687488 37.0 33.0 40.0 19.0 41.0 44 33.692118523178394 36.0 33.0 40.0 18.0 41.0 45 33.6066596795854 36.0 33.0 40.0 19.0 41.0 46 33.568406638300594 36.0 33.0 40.0 19.0 41.0 47 33.51552373006931 36.0 33.0 40.0 19.0 41.0 48 33.362423100126186 36.0 33.0 40.0 18.0 41.0 49 33.30251461205112 36.0 33.0 40.0 18.0 41.0 50 33.229347461490164 35.0 32.0 40.0 18.0 41.0 51 32.83432508112345 35.0 32.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 2.0 12 6.0 13 8.0 14 16.0 15 39.0 16 119.0 17 345.0 18 819.0 19 1535.0 20 2899.0 21 4650.0 22 7396.0 23 11255.0 24 17208.0 25 26790.0 26 37453.0 27 41857.0 28 40870.0 29 40560.0 30 43383.0 31 50651.0 32 60720.0 33 78207.0 34 121921.0 35 175068.0 36 134170.0 37 151555.0 38 214793.0 39 363373.0 40 93.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.926537352420436 22.70363184880382 27.26995157780664 20.099879220969108 2 36.7235216855494 23.778172046842112 27.405843346033766 12.092462921574723 3 27.053335676012402 24.055668935215504 36.27192114837145 12.619074240400646 4 24.055177464082675 25.921907694349187 36.23278775941996 13.790127082148171 5 21.760990216038422 29.817369327040865 35.118008362381325 13.303632094539386 6 19.954035162302198 38.08243936782068 32.085324303370385 9.878201166506734 7 81.65442698766284 3.325170816935604 13.281823063020115 1.7385791323814355 8 82.25236305464053 2.709296053609671 13.055193436894491 1.9831474548553047 9 77.34723541344395 5.229437154971906 14.626119479089747 2.7972079524944 10 38.67638223184414 29.954981244232894 20.822587521793672 10.546049002129298 11 30.976749729383705 23.411350280077112 30.87010049355989 14.741799496979297 12 29.24603413512753 21.66066867104977 32.61291856446197 16.480378629360732 13 21.791830029623423 27.85498652754757 33.560843511905276 16.792339930923735 14 16.921904008315693 31.02442242926809 34.576775777353745 17.476897785062473 15 16.603430714242712 26.70248672106433 41.25420975742213 15.439872807270824 16 19.9386152555097 24.918385075004636 39.7829909212995 15.360008748186162 17 19.436638927216812 25.85304030186157 33.239237089360515 21.471083681561108 18 21.49578010598575 26.426279944414617 35.50289169327778 16.575048256321857 19 23.030767321592908 28.69515642911819 31.637594101363465 16.636482147925438 20 25.12719887256522 27.478642507584013 31.483579335113276 15.910579284737485 21 21.839195560049788 28.301672353397233 33.18873843046236 16.670393656090617 22 21.417083290841557 24.96415332424931 33.88460012065616 19.73416326425297 23 19.287723173969724 28.679429352867675 32.8105513937507 19.222296079411905 24 19.63046285522612 26.322948138737384 36.94935267108417 17.09723633495232 25 18.669145319413232 28.36482639396572 34.518659315896755 18.44736897072429 26 17.989440742711178 31.53671965135038 32.487286256132634 17.986553349805806 27 17.626182141659182 30.861868352085004 33.92735810921226 17.584591397043557 28 17.09035573909272 29.098101324146096 36.94892263384295 16.862620302918234 29 17.54834540099744 27.520540421657657 36.49873507617188 18.43237910117302 30 18.55782710782754 29.625265547996456 34.80635423027634 17.01055311389966 31 22.474544867014053 28.02085803487725 31.96245652016322 17.542140577945478 32 22.578798181065338 28.924980617607197 31.44985212862291 17.046369072704554 33 21.755153996336084 29.57912869540216 30.58529297208567 18.080424336176083 34 18.575581502500974 30.045289064890163 31.308185574585046 20.070943858023817 35 18.926307589665836 30.30767321592907 31.671874212878265 19.094144981526828 36 21.607159751463048 30.082087965960707 29.45699811889424 18.853754163682005 37 19.40819503540435 32.30974230939828 30.180259324743236 18.101803330454132 38 19.347866953849632 32.12415052286385 28.51791965184185 20.010062871444667 39 19.561779764413313 31.413790434251602 29.41497733703739 19.609452464297693 40 21.573186809406266 29.652972233109676 28.945376669619588 19.828464287864474 41 18.07575536041421 29.160702459690153 30.36148930497381 22.402052874921825 42 20.025114174887545 29.458841135642345 28.738283021023907 21.777761668446203 43 20.05552395123132 29.485319142923494 29.381495866113433 21.077661039731755 44 19.127687886342386 31.20921557521167 29.43727783968949 20.225818698756456 45 18.460761559093875 32.81380739000569 27.94216121973306 20.783269831167377 46 20.107558457419554 32.28000830586215 28.14016265237141 19.47227058434689 47 19.593356784697555 30.19973386838157 29.75470675760521 20.452202589315664 48 19.92012365413702 28.759170544169127 31.606201382754033 19.714504418939825 49 19.413232614515845 28.60552438126856 30.85719937632313 21.124043627892462 50 18.492645748836132 30.762591183253612 30.81431851998383 19.93044454792642 51 17.635212923724907 31.846960803948477 29.360239739618592 21.157586532708017 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1092.0 1 1715.5 2 2339.0 3 26492.0 4 50645.0 5 34310.5 6 17976.0 7 17616.5 8 17257.0 9 19201.0 10 21145.0 11 22569.5 12 23994.0 13 24046.0 14 24098.0 15 22553.0 16 21008.0 17 19412.5 18 17817.0 19 16424.5 20 15032.0 21 14193.0 22 13354.0 23 13656.5 24 13959.0 25 15113.0 26 18268.5 27 20270.0 28 23240.5 29 26211.0 30 29262.5 31 32314.0 32 37150.5 33 41987.0 34 46840.0 35 51693.0 36 56152.0 37 60611.0 38 66509.0 39 72407.0 40 83289.5 41 94172.0 42 103710.5 43 113249.0 44 116315.5 45 119382.0 46 121939.5 47 124497.0 48 119732.0 49 114967.0 50 109854.5 51 104742.0 52 94812.0 53 84882.0 54 76026.5 55 67171.0 56 62420.0 57 57669.0 58 53555.5 59 49442.0 60 45210.5 61 40979.0 62 36116.5 63 31254.0 64 27155.0 65 23056.0 66 19052.0 67 15048.0 68 12624.5 69 10201.0 70 8388.5 71 6576.0 72 5328.5 73 4081.0 74 3267.0 75 1822.0 76 1191.0 77 970.5 78 750.0 79 512.5 80 275.0 81 221.5 82 168.0 83 107.5 84 47.0 85 34.5 86 22.0 87 15.5 88 9.0 89 6.5 90 4.0 91 3.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1627766.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.722061285780953 #Duplication Level Percentage of deduplicated Percentage of total 1 75.70432094715088 20.229755039481965 2 7.38551822433138 3.947125412356705 3 3.1636971757376395 2.536215294591399 4 1.8068830014626571 1.9313455320528385 5 1.2209238278525385 1.63128006765729 6 0.8594581748742518 1.3779896412933121 7 0.6796906011002747 1.2713913728579584 8 0.5788344062359204 1.2374118782203913 9 0.5113928714816482 1.2298924487559697 >10 7.171617601155374 45.33646745430215 >50 0.8731901781876096 14.596070872332623 >100 0.04191171912688433 1.7369451030451633 >500 0.0011642142286217433 0.20937167269796664 >1k 0.0011642142286217433 0.5304911980454274 >5k 0.0 0.0 >10k+ 2.3284284572434863E-4 2.1982470123088147 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 35330 2.170459390354633 No Hit CGTTTCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTT 2334 0.14338670300276576 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCT 1751 0.1075707441978761 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1649 0.10130448725431052 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0340343759483857 0.0 2 0.0 0.0 0.0 0.09970720607261732 0.0 3 0.0 0.0 0.0 0.21256126494840166 0.0 4 0.0 0.0 0.0 0.34243251179837886 0.0 5 0.0 0.0 0.0 0.6325847818421075 0.0 6 0.0 0.0 0.0 1.232671035025919 0.0 7 0.0 0.0 0.0 1.6315612932079917 0.0 8 0.0 0.0 0.0 2.2578798181065336 0.0 9 0.0 0.0 0.0 2.618742497385988 0.0 10 0.0 0.0 0.0 3.0330526623605603 0.0 11 0.0 0.0 0.0 3.3364132190990596 0.0 12 0.0 0.0 0.0 3.5727494000980484 0.0 13 0.0 0.0 0.0 3.7120814662549777 0.0 14 0.0 0.0 0.0 3.789303868000683 0.0 15 0.0 0.0 0.0 3.8569425826562296 0.0 16 0.0 0.0 0.0 3.964881930203727 0.0 17 0.0 0.0 0.0 4.089654164050607 0.0 18 0.0 0.0 0.0 4.244037533650414 0.0 19 0.0 0.0 0.0 4.341041648492474 0.0 20 0.0 0.0 0.0 4.440441685107073 0.0 21 0.0 0.0 0.0 4.565091051170746 0.0 22 0.0 0.0 0.0 4.711488014862087 0.0 23 0.0 0.0 0.0 4.869495984066506 0.0 24 0.0 0.0 0.0 4.995251160179043 0.0 25 0.0 0.0 0.0 5.107183710680774 0.0 26 0.0 0.0 0.0 5.210146913008381 0.0 27 0.0 0.0 0.0 5.324045348041426 0.0 28 0.0 0.0 0.0 5.439049593123336 0.0 29 0.0 0.0 0.0 5.569596612780953 0.0 30 0.0 0.0 0.0 5.7469562578405 0.0 31 0.0 0.0 0.0 5.895810577195985 0.0 32 0.0 0.0 0.0 6.04620074384156 0.0 33 0.0 0.0 0.0 6.189526012952721 0.0 34 0.0 0.0 0.0 6.342434969154043 0.0 35 0.0 0.0 0.0 6.513589791161629 0.0 36 0.0 0.0 0.0 6.6662530117965355 0.0 37 0.0 0.0 0.0 6.828499919521602 0.0 38 0.0 0.0 0.0 7.028344368908062 0.0 39 0.0 0.0 0.0 7.282373510688883 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 16430 0.0 43.46622 1 CCGAACC 55 6.184564E-11 40.909092 18 GCGATAC 50 1.0822987E-9 40.5 9 TAACGCG 45 1.9292202E-8 40.000004 1 TACGCGG 80 0.0 39.375 2 TCACGAC 110 0.0 38.863636 25 AATCGGT 35 6.249893E-6 38.571426 26 GGGCGAT 2200 0.0 38.147728 7 TAGGGAC 1540 0.0 37.694805 5 GTTTTTT 19435 0.0 37.636997 2 CGGGACC 365 0.0 37.602737 6 AAGGGCG 485 0.0 37.57732 5 TTACGCG 30 1.1401305E-4 37.500004 1 TAATGCG 60 1.5643309E-10 37.500004 1 AGGGATC 1585 0.0 37.47634 6 GGCACCG 495 0.0 37.272728 8 GACCGAT 750 0.0 37.2 9 TATGGGC 660 0.0 37.159092 4 ATATGCG 85 0.0 37.058823 1 CTCGTAG 55 2.750312E-9 36.81818 1 >>END_MODULE