##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547639_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2772696 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.292171951054137 31.0 31.0 33.0 30.0 34.0 2 31.690339294318598 31.0 31.0 34.0 30.0 34.0 3 31.647867274306307 31.0 31.0 34.0 30.0 34.0 4 35.52211962652956 37.0 35.0 37.0 33.0 37.0 5 35.47093839353467 37.0 35.0 37.0 33.0 37.0 6 35.53121510616382 37.0 35.0 37.0 33.0 37.0 7 35.933575119666926 37.0 35.0 37.0 35.0 37.0 8 35.977587878368205 37.0 35.0 37.0 35.0 37.0 9 37.790530588279424 39.0 38.0 39.0 35.0 39.0 10 37.177295311134 39.0 37.0 39.0 33.0 39.0 11 36.848721605253516 39.0 37.0 39.0 32.0 39.0 12 36.53713317291185 39.0 35.0 39.0 32.0 39.0 13 36.43817930274361 39.0 35.0 39.0 32.0 39.0 14 37.52491329738277 40.0 36.0 41.0 32.0 41.0 15 37.690549919644994 40.0 36.0 41.0 33.0 41.0 16 37.72211089856226 40.0 36.0 41.0 33.0 41.0 17 37.604495047419555 40.0 36.0 41.0 32.0 41.0 18 37.44104979413538 39.0 36.0 41.0 32.0 41.0 19 37.319967641602254 39.0 36.0 41.0 32.0 41.0 20 37.10013430971156 39.0 35.0 41.0 32.0 41.0 21 36.948586502090386 39.0 35.0 41.0 32.0 41.0 22 36.90135305132622 38.0 35.0 41.0 31.0 41.0 23 36.80511386751378 38.0 35.0 41.0 31.0 41.0 24 36.73044430402756 38.0 35.0 40.0 31.0 41.0 25 36.639831773840335 38.0 35.0 40.0 31.0 41.0 26 36.5554377400191 38.0 35.0 40.0 31.0 41.0 27 36.47744577840484 38.0 35.0 40.0 31.0 41.0 28 36.4385670120345 38.0 35.0 40.0 31.0 41.0 29 36.43501234899174 38.0 35.0 40.0 31.0 41.0 30 36.381118954259684 38.0 35.0 40.0 30.0 41.0 31 36.26011614688375 38.0 35.0 40.0 30.0 41.0 32 36.03568187785462 38.0 35.0 41.0 30.0 41.0 33 35.770937744347016 38.0 35.0 41.0 28.0 41.0 34 35.51452485234588 38.0 35.0 41.0 26.0 41.0 35 35.239677195047705 38.0 34.0 41.0 25.0 41.0 36 35.139400064053184 38.0 34.0 40.0 24.0 41.0 37 35.10102225415264 38.0 34.0 40.0 24.0 41.0 38 35.002603242475914 38.0 34.0 40.0 24.0 41.0 39 34.91386938921541 38.0 34.0 40.0 23.0 41.0 40 34.8556246339303 38.0 34.0 40.0 23.0 41.0 41 34.75090669875096 38.0 34.0 40.0 23.0 41.0 42 34.71003348365634 38.0 34.0 40.0 23.0 41.0 43 34.65905097421427 38.0 34.0 40.0 23.0 41.0 44 34.53227183939386 38.0 34.0 40.0 23.0 41.0 45 34.45745368406778 38.0 34.0 40.0 23.0 41.0 46 34.43347810217925 38.0 34.0 40.0 23.0 41.0 47 34.39276970861573 38.0 33.0 40.0 23.0 41.0 48 34.25532117476997 37.0 33.0 40.0 22.0 41.0 49 34.18316757408674 37.0 33.0 40.0 22.0 41.0 50 34.10263043622525 37.0 33.0 40.0 21.0 41.0 51 33.715358625684175 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 5.0 13 7.0 14 15.0 15 48.0 16 168.0 17 488.0 18 1082.0 19 2265.0 20 4164.0 21 6553.0 22 10473.0 23 15651.0 24 25096.0 25 38864.0 26 54222.0 27 60212.0 28 60680.0 29 62789.0 30 69607.0 31 81739.0 32 99401.0 33 124919.0 34 188595.0 35 270332.0 36 209381.0 37 260997.0 38 394021.0 39 730738.0 40 182.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.743794487387003 23.67075222094308 28.275728749202944 18.30972454246697 2 34.70946688710194 24.700363833611764 28.37400854619475 12.216160733091547 3 27.00032747910337 24.50596819846099 35.955077657269314 12.538626665166323 4 23.467845014383112 27.548891043230128 35.520843251477984 13.462420690908777 5 21.72791391483235 31.022441695735846 34.06886294061808 13.180781448813716 6 20.708400776716957 38.84883160649418 30.471245315029126 9.971522301759732 7 84.63459391148542 2.682804029002819 11.20674606952944 1.4758559899823132 8 85.2919324729433 1.992537227305121 10.797180794432567 1.9183495053190107 9 80.13933009605093 5.095293533802479 12.419140071612611 2.34623629853399 10 36.72634865127659 38.22146387487124 16.572281995573984 8.47990547827818 11 25.13380478783105 24.055107375637284 34.91356427101998 15.89752356551169 12 26.354097239654113 22.753161543854787 33.725190211981406 17.16755100450969 13 20.84061866140392 27.39965001572477 35.05487078280489 16.70486054006642 14 15.866326492338143 30.936604662032906 34.933472692282166 18.26359615334678 15 15.171226849247086 28.038270333278515 41.2528456058652 15.537657211609208 16 19.192150888521496 26.39820593386365 39.05191914295689 15.357724034657966 17 18.96017450164028 26.190213424046487 33.85362116871089 20.995990905602348 18 19.896483422632702 26.91070351744295 35.761295143787855 17.431517916136496 19 21.87434179585501 28.582614177681215 32.6725324377429 16.87051158872087 20 23.24870811657679 27.835218862796353 32.653201072169466 16.262871948457384 21 21.722504017750232 27.50041836537435 34.36211542844943 16.414962188425992 22 20.648062391261067 24.61160545548448 34.71675221517253 20.023579938081927 23 17.55367339225072 28.673392250719154 34.42021772311137 19.352716633918757 24 17.74990839240941 27.351826525518845 37.52769867306044 17.3705664090113 25 17.972687954251025 28.96177583117659 34.796061306396375 18.269474908176015 26 17.401042162573898 31.991065735298786 32.56238693315098 18.04550516897633 27 17.12665218256888 30.89083693271819 34.47637245482375 17.506138429889177 28 16.225074800843657 29.44570915816231 37.14821242574015 17.18100361525389 29 16.823265154203707 27.40661074997043 36.80165441865967 18.968469677166194 30 17.804151627152777 29.057350679627337 34.98295521759328 18.15554247562661 31 20.63446551659468 28.051867207944902 32.93354193896482 18.3801253364956 32 20.8968455250774 28.796846102133088 32.05086313104646 18.255445241743054 33 20.03173084968565 28.819351273994698 32.00862986782539 19.14028800849426 34 17.55100450969021 29.55480874931835 31.6411535920274 21.25303314896404 35 17.247473217402845 29.70816129860612 32.46219563919016 20.582169844800873 36 20.19345070646043 29.094895365377237 31.12984618580616 19.581807742356176 37 17.487023460199026 31.222102964046545 32.606748089224354 18.68412548653008 38 17.783666150201825 30.627591340702338 30.773261836133496 20.815480672962344 39 17.855401385510707 30.12941195140037 31.489640407747547 20.52554625534137 40 19.903408090897813 29.101134780011943 31.206991318197165 19.78846581089308 41 17.22302048259167 28.714002544815585 32.368099495941856 21.694877476650884 42 19.253463055452166 28.724137085349422 30.79248500376529 21.229914855433123 43 19.3782874141269 28.916368761667343 30.852643059318442 20.852700764887317 44 18.70111256336793 30.86750224330399 30.136553015548767 20.294832177779316 45 17.646831820004792 32.105935883342426 29.652114764835382 20.595117531817408 46 19.53373179028642 31.2071716480999 29.49032277609951 19.76877378551417 47 18.29205221199872 30.262567551581565 30.979523178884378 20.465857057535338 48 19.256853257623625 28.433120688312023 32.11495237847928 20.195073675585064 49 19.017447278749636 27.810730062004634 31.983672209286556 21.188150449959174 50 17.252883114484963 30.6174568001685 31.74296785511286 20.38669223023368 51 16.980188235565674 30.654352298268545 30.748628771419583 21.6168306947462 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1557.0 1 2173.0 2 2789.0 3 34993.0 4 67197.0 5 45967.5 6 24738.0 7 23939.0 8 23140.0 9 24302.0 10 25464.0 11 26517.0 12 27570.0 13 27605.5 14 27641.0 15 26977.0 16 26313.0 17 25140.5 18 23968.0 19 23228.5 20 22489.0 21 22324.0 22 22159.0 23 23899.5 24 25640.0 25 28682.0 26 37563.0 27 43402.0 28 49857.5 29 56313.0 30 65235.0 31 74157.0 32 85882.0 33 97607.0 34 104484.0 35 111361.0 36 119905.0 37 128449.0 38 140926.5 39 153404.0 40 170347.5 41 187291.0 42 201485.5 43 215680.0 44 221151.0 45 226622.0 46 232216.5 47 237811.0 48 233078.0 49 228345.0 50 208810.5 51 189276.0 52 166117.5 53 142959.0 54 121768.0 55 100577.0 56 87503.0 57 74429.0 58 65102.0 59 55775.0 60 47366.5 61 38958.0 62 32120.5 63 25283.0 64 20185.5 65 15088.0 66 11586.5 67 8085.0 68 6186.5 69 4288.0 70 3215.0 71 2142.0 72 1873.5 73 1605.0 74 1156.5 75 532.0 76 356.0 77 234.0 78 112.0 79 99.5 80 87.0 81 76.0 82 65.0 83 47.5 84 30.0 85 21.0 86 12.0 87 13.5 88 15.0 89 12.5 90 10.0 91 7.0 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2772696.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.570269991689592 #Duplication Level Percentage of deduplicated Percentage of total 1 76.40810650548873 18.009596998881435 2 7.974596245862117 3.759267731793687 3 3.2158426902505775 2.2739484138002255 4 1.8148184493063146 1.7110304334419708 5 1.140033020957946 1.3435443051710152 6 0.8255562308679851 1.1675149952928021 7 0.6031326944618903 0.9951200314497387 8 0.5191946821039218 0.9790047068351109 9 0.40096460939042833 0.8505759690400275 >10 5.127705873662696 28.424102858988242 >50 1.5824722679190661 26.332953901841506 >100 0.3839899323063184 11.462264408213981 >500 0.0017154248540207535 0.28527338384946993 >1k 0.0017154248540207535 0.7330140214825577 >5k 0.0 0.0 >10k+ 1.559477140018867E-4 1.6727878399182488 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 45509 1.6413267087340262 No Hit CGTTTCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTT 3260 0.11757509658469589 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.213196109490546E-5 0.0 0.0 0.05727277710935494 0.0 2 7.213196109490546E-5 0.0 0.0 0.17308064064722567 0.0 3 7.213196109490546E-5 0.0 0.0 0.3280922250401775 0.0 4 7.213196109490546E-5 0.0 0.0 0.5498258734459169 0.0 5 7.213196109490546E-5 0.0 0.0 0.9890373845527962 0.0 6 7.213196109490546E-5 0.0 0.0 1.764852692109052 0.0 7 7.213196109490546E-5 0.0 0.0 2.227038232824659 0.0 8 7.213196109490546E-5 0.0 0.0 3.1132875728172147 0.0 9 7.213196109490546E-5 0.0 0.0 3.5609745893527456 0.0 10 7.213196109490546E-5 0.0 0.0 4.085410012493256 0.0 11 7.213196109490546E-5 0.0 0.0 4.561372757777989 0.0 12 7.213196109490546E-5 0.0 0.0 4.958711665469276 0.0 13 7.213196109490546E-5 0.0 0.0 5.1659828556754865 0.0 14 7.213196109490546E-5 0.0 0.0 5.296325309373981 0.0 15 7.213196109490546E-5 0.0 0.0 5.417290608130138 0.0 16 7.213196109490546E-5 0.0 0.0 5.60230908833857 0.0 17 7.213196109490546E-5 0.0 0.0 5.836665829935918 0.0 18 7.213196109490546E-5 0.0 0.0 6.101606523037506 0.0 19 7.213196109490546E-5 0.0 0.0 6.287057795012507 0.0 20 7.213196109490546E-5 0.0 0.0 6.4766566547504665 0.0 21 7.213196109490546E-5 0.0 0.0 6.702177231113689 0.0 22 7.213196109490546E-5 0.0 0.0 6.965026097343524 0.0 23 7.213196109490546E-5 0.0 0.0 7.229750394561827 0.0 24 7.213196109490546E-5 0.0 0.0 7.433378920732745 0.0 25 7.213196109490546E-5 0.0 0.0 7.617531817408039 0.0 26 7.213196109490546E-5 0.0 0.0 7.797645324262018 0.0 27 7.213196109490546E-5 0.0 0.0 7.980391647695961 0.0 28 7.213196109490546E-5 0.0 0.0 8.171757740480745 0.0 29 7.213196109490546E-5 0.0 0.0 8.385160147380024 0.0 30 7.213196109490546E-5 0.0 0.0 8.666691191533438 0.0 31 7.213196109490546E-5 0.0 0.0 8.909703768462176 0.0 32 7.213196109490546E-5 0.0 0.0 9.13320464991474 0.0 33 7.213196109490546E-5 0.0 0.0 9.344911955728287 0.0 34 7.213196109490546E-5 0.0 0.0 9.57082925787753 0.0 35 7.213196109490546E-5 0.0 0.0 9.823543583573533 0.0 36 7.213196109490546E-5 0.0 0.0 10.069621768848803 0.0 37 7.213196109490546E-5 0.0 0.0 10.322155764642067 0.0 38 7.213196109490546E-5 0.0 0.0 10.599575287013073 0.0 39 7.213196109490546E-5 0.0 0.0 10.958792453265703 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGAA 20 7.035013E-4 45.0 18 CTACGCG 45 3.8562575E-10 45.0 1 TCGTACT 20 7.035013E-4 45.0 34 CGTTTTT 22385 0.0 43.743576 1 GCGATCG 100 0.0 42.75 9 TAACGCG 140 0.0 41.785713 1 CGTTAGG 345 0.0 39.782608 2 CAGCGCG 125 0.0 39.6 1 GTGCGTA 40 3.4605728E-7 39.375 23 TAGGGAC 3555 0.0 39.177216 5 TACGGGA 1505 0.0 39.169437 4 TCGTCCC 455 0.0 39.065933 38 TGGGCGA 1110 0.0 38.91892 6 CGGGATC 860 0.0 38.720932 6 ACGGGAT 1685 0.0 38.456974 5 GGGCGAT 3865 0.0 38.421738 7 TAGCGGA 100 0.0 38.25 3 TAGGGAT 5665 0.0 38.12886 5 TCGCGAG 65 9.094947E-12 38.07692 1 AGGGCGA 1780 0.0 38.047752 6 >>END_MODULE