SRR1547638_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547638_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1777324
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8956	0.5039036213993622	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3889	0.21881210178898164	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGGTG	40	6.8193913E-9	45.0	32
CGTATAT	20	7.0343283E-4	45.0	27
CGAGTGT	50	2.1827873E-11	45.0	28
CGACGGT	105	0.0	45.0	28
GACACGT	20	7.0343283E-4	45.0	12
CGTTGCA	20	7.0343283E-4	45.0	11
ATAGCCG	20	7.0343283E-4	45.0	1
CCTCGAA	20	7.0343283E-4	45.0	13
AAACGTC	25	3.8916693E-5	45.0	36
CGTACTC	20	7.0343283E-4	45.0	15
TACTCGC	100	0.0	45.0	45
ACCGTTA	25	3.8916693E-5	45.0	40
CCGCGTA	25	3.8916693E-5	45.0	27
CCAACGA	20	7.0343283E-4	45.0	33
CGATCCA	20	7.0343283E-4	45.0	24
GCGTATT	25	3.8916693E-5	45.0	29
GTAACGT	25	3.8916693E-5	45.0	31
TCGAAAC	20	7.0343283E-4	45.0	23
GTACGGA	35	1.2124292E-7	45.0	18
TGCGTAA	25	3.8916693E-5	45.0	22