##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547638_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1777324 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.291373998213043 31.0 31.0 33.0 30.0 34.0 2 31.69358710060743 31.0 31.0 34.0 30.0 34.0 3 31.83584028573293 31.0 31.0 34.0 30.0 34.0 4 35.592458099930006 37.0 35.0 37.0 33.0 37.0 5 35.477242753712886 37.0 35.0 37.0 33.0 37.0 6 35.52503764085783 37.0 35.0 37.0 33.0 37.0 7 35.873001208558485 37.0 35.0 37.0 35.0 37.0 8 35.90644136915948 37.0 35.0 37.0 35.0 37.0 9 37.728508701846145 39.0 37.0 39.0 35.0 39.0 10 37.140452162914585 39.0 37.0 39.0 33.0 39.0 11 36.78710803432576 39.0 35.0 39.0 32.0 39.0 12 35.80504342483419 37.0 35.0 39.0 32.0 39.0 13 35.42635613990471 37.0 35.0 39.0 30.0 39.0 14 36.34833941363533 38.0 35.0 41.0 31.0 41.0 15 36.67436213093392 38.0 35.0 41.0 32.0 41.0 16 36.83839637567489 38.0 35.0 41.0 32.0 41.0 17 36.75908388116066 38.0 35.0 41.0 32.0 41.0 18 36.704558651095695 38.0 35.0 40.0 32.0 41.0 19 36.64324512581837 38.0 35.0 40.0 31.0 41.0 20 36.46095759692662 37.0 35.0 40.0 31.0 41.0 21 36.2437349633494 37.0 35.0 40.0 31.0 41.0 22 36.13687656274264 37.0 35.0 40.0 31.0 41.0 23 36.147524593152404 37.0 35.0 40.0 31.0 41.0 24 36.06255865559684 37.0 35.0 40.0 31.0 41.0 25 35.95467117981865 37.0 35.0 40.0 30.0 41.0 26 35.810618097769456 36.0 34.0 40.0 30.0 41.0 27 35.73394665238302 36.0 34.0 40.0 30.0 41.0 28 35.77592492983834 36.0 35.0 40.0 30.0 41.0 29 35.86885565040477 36.0 35.0 40.0 30.0 41.0 30 35.91066569741927 36.0 35.0 40.0 30.0 41.0 31 35.78263445494463 36.0 35.0 40.0 30.0 41.0 32 35.62219268968404 36.0 34.0 40.0 30.0 41.0 33 35.51454940123467 36.0 34.0 40.0 29.0 41.0 34 35.45178650600566 36.0 34.0 40.0 29.0 41.0 35 35.29394302895814 36.0 34.0 40.0 29.0 41.0 36 35.144913364136194 36.0 34.0 40.0 27.0 41.0 37 35.084665485865266 36.0 34.0 40.0 27.0 41.0 38 35.03819281121506 36.0 34.0 40.0 27.0 41.0 39 35.01920358921615 36.0 34.0 40.0 27.0 41.0 40 34.919301714262566 36.0 34.0 40.0 27.0 41.0 41 34.880862465144226 36.0 34.0 40.0 27.0 41.0 42 34.825528153561194 36.0 34.0 40.0 27.0 41.0 43 34.770921902815694 36.0 34.0 40.0 27.0 41.0 44 34.62483936524798 35.0 34.0 40.0 26.0 41.0 45 34.5495897202761 35.0 34.0 40.0 26.0 41.0 46 34.52875165135901 35.0 34.0 40.0 26.0 41.0 47 34.483751415048694 35.0 33.0 40.0 26.0 41.0 48 34.391504869117846 35.0 34.0 40.0 26.0 41.0 49 34.36052683697514 36.0 34.0 40.0 25.0 41.0 50 34.24816240595412 35.0 34.0 40.0 24.0 41.0 51 33.80671616430094 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 2.0 12 4.0 13 9.0 14 15.0 15 39.0 16 127.0 17 319.0 18 720.0 19 1472.0 20 2624.0 21 4280.0 22 6435.0 23 9514.0 24 13984.0 25 19786.0 26 26355.0 27 31640.0 28 35479.0 29 40344.0 30 48207.0 31 58555.0 32 73021.0 33 95355.0 34 173458.0 35 288744.0 36 115429.0 37 141914.0 38 210107.0 39 379233.0 40 151.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.55506593057878 24.47229655369533 29.274459805865447 13.698177709860444 2 29.631007064553227 27.02984936905145 30.18352309426981 13.15562047212551 3 29.255836302216142 25.86568346570462 31.496395705003703 13.382084527075536 4 26.598020394705753 27.361246458158444 31.141367584075834 14.899365563059972 5 23.696129687102633 32.75559211488733 29.571535634470695 13.976742563539343 6 21.804578118564763 41.804251785268185 26.132995447087872 10.258174649079177 7 88.13092041743656 4.18961314875622 6.2911433143309825 1.3883231194762462 8 88.84772838266967 3.2302495211902835 5.603367759620643 2.318654336519397 9 84.03307444225139 5.681969072605782 7.6504340232844426 2.6345224618583893 10 50.564669131795895 27.863012033821633 12.202670981768096 9.36964785261438 11 45.41321672356869 18.78667029759346 22.198935028165938 13.601177950671909 12 42.583288134296275 20.049748948419083 23.22896669374858 14.137996223536057 13 21.760523123527282 40.28421379557132 23.058260621023514 14.897002459877884 14 15.828965343403903 40.936374009465915 26.806986233236035 16.42767441389415 15 14.551426751678365 25.14195498400967 45.90524856469614 14.401369699615826 16 16.709615129261742 21.07331021243172 44.762969497964356 17.454105160342177 17 17.426816945025216 21.504745336247076 27.09534108581215 33.97309663291555 18 21.70048904982997 25.13632854786184 33.78387958526414 19.37930281704405 19 28.52687523490371 26.21930497759553 25.706511587082602 19.547308200418158 20 31.12330672404131 23.486938791126434 26.30538945065728 19.084365034174976 21 22.298466683620994 29.748712108765762 28.255455955132547 19.697365252480694 22 22.118251933806103 23.910046789443005 27.4108153606208 26.560885916130093 23 19.518163261172415 30.184085737884597 25.929262194175063 24.368488806767928 24 19.92152246861011 23.887034665598396 38.50654129466547 17.68490157112603 25 17.49174601817114 26.031213217173683 34.83489785767817 21.642142906977003 26 16.798231498590017 36.181529085299026 26.68748072945619 20.33275868665477 27 17.245983287234065 35.64060351404696 29.04478868231116 18.068624516407812 28 14.290528907503642 29.397847550587286 38.87270975916603 17.438913782743047 29 15.462234235288557 24.341706970704273 38.51177388028294 21.684284913724227 30 17.328748162968598 31.85946962962296 32.42948387575929 18.382298331649153 31 29.031847879171156 26.63273550573784 25.92678656227002 18.408630052820982 32 27.874152377394328 27.39264197186332 27.033168966378668 17.700036684363685 33 26.401376451339203 29.232542856564137 25.008946033475045 19.357134658621614 34 18.337736957358366 27.937618577141816 28.363033414278995 25.361611051220823 35 19.59822744755599 26.66756314549289 31.76955917998069 21.964650226970434 36 28.660165507245722 25.724291125309733 27.270435778732523 18.34510758871202 37 19.003738204176614 32.565587366175215 30.494890070690545 17.935784358957623 38 19.617582387904513 32.0551008144829 25.863095305076623 22.46422149253597 39 19.66928933610304 31.76432659436321 28.88274732125375 19.683636748279998 40 23.654887910139063 27.099673441645983 26.649220963650972 22.596217684563985 41 16.703932428752438 24.631637225401786 29.466546335952255 29.197884009893528 42 21.54199234354569 25.41281162016605 25.910469897441324 27.134726138846943 43 22.902127017921327 25.44398207642501 26.714768944773155 24.939121960880513 44 18.60848106479179 30.30010285125278 29.09666442359412 21.99475166036131 45 17.197595936362756 37.30585982071924 23.961191094026752 21.535353148891254 46 21.492198383637422 33.49484956035028 25.615419585849285 19.39753247016301 47 20.65549106409411 27.444067598254456 28.219109177617586 23.68133216003385 48 22.508220223211975 23.628556188967234 32.63991258768801 21.22331100013278 49 20.37878293434399 24.052789474513368 33.37821353900583 22.19021405213681 50 18.17614571119278 31.46983892638596 29.794680092093508 20.55933527032775 51 17.728000072018382 33.00613731655005 25.881099900749664 23.3847627106819 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 853.0 1 1619.5 2 2386.0 3 8393.0 4 14400.0 5 10326.0 6 6252.0 7 6196.0 8 6140.0 9 6637.5 10 7135.0 11 7230.0 12 7325.0 13 7285.5 14 7246.0 15 6900.5 16 6555.0 17 6175.0 18 5795.0 19 5965.0 20 6135.0 21 6147.5 22 6160.0 23 6218.5 24 6277.0 25 8302.0 26 12947.5 27 15568.0 28 19849.0 29 24130.0 30 28157.5 31 32185.0 32 36556.0 33 40927.0 34 46966.5 35 53006.0 36 54381.0 37 55756.0 38 65187.0 39 74618.0 40 104241.5 41 133865.0 42 161276.0 43 188687.0 44 187518.5 45 186350.0 46 184678.5 47 183007.0 48 171523.5 49 160040.0 50 145681.5 51 131323.0 52 116296.5 53 101270.0 54 89503.0 55 77736.0 56 67903.5 57 58071.0 58 52766.5 59 47462.0 60 41287.0 61 35112.0 62 31714.5 63 28317.0 64 23961.5 65 19606.0 66 16684.5 67 13763.0 68 11593.0 69 9423.0 70 7896.0 71 6369.0 72 5105.5 73 3842.0 74 2774.5 75 1409.5 76 1112.0 77 885.5 78 659.0 79 451.5 80 244.0 81 171.0 82 98.0 83 60.0 84 22.0 85 24.5 86 27.0 87 28.5 88 30.0 89 17.0 90 4.0 91 2.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1777324.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.94356224916656 #Duplication Level Percentage of deduplicated Percentage of total 1 79.22952021865771 13.424303077964275 2 8.255964812882736 2.797709074680148 3 2.775199262923084 1.4106528439553532 4 1.2264667478724534 0.8312286275643912 5 0.7147447751285347 0.6055161294828443 6 0.4902412392117793 0.4983859772216002 7 0.336957656353461 0.39964841180306976 8 0.2644721155071051 0.35848798018107236 9 0.21258029836393202 0.32416807664481134 >10 3.1971271095249185 13.965814714109861 >50 1.6465106481675276 20.12039290281867 >100 1.6384278645824375 43.03889052435731 >500 0.008082686279543226 0.8308269552487457 >1k 0.0033677859498096774 0.8829248268244396 >5k 3.3677859498096774E-4 0.5110498771433906 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8956 0.5039036213993622 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3889 0.21881210178898164 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.626436147826733E-5 0.0 0.0 0.04129804132504822 0.0 2 5.626436147826733E-5 0.0 0.0 0.15770900522358333 0.0 3 5.626436147826733E-5 0.0 0.0 0.2469442825281153 0.0 4 5.626436147826733E-5 0.0 0.0 0.543007352626758 0.0 5 5.626436147826733E-5 0.0 0.0 0.8928028879371459 0.0 6 5.626436147826733E-5 0.0 0.0 1.3452808829453717 0.0 7 5.626436147826733E-5 0.0 0.0 1.5459758603383513 0.0 8 5.626436147826733E-5 0.0 0.0 2.1374830925593757 0.0 9 5.626436147826733E-5 0.0 0.0 2.3099896248517435 0.0 10 5.626436147826733E-5 0.0 0.0 2.638292174077433 0.0 11 5.626436147826733E-5 0.0 0.0 3.038331784187914 0.0 12 5.626436147826733E-5 0.0 0.0 3.3765368610337787 0.0 13 5.626436147826733E-5 0.0 0.0 3.509770869014316 0.0 14 5.626436147826733E-5 0.0 0.0 3.558833392223365 0.0 15 5.626436147826733E-5 0.0 0.0 3.6401353945594614 0.0 16 5.626436147826733E-5 0.0 0.0 3.8234446842556564 0.0 17 5.626436147826733E-5 0.0 0.0 4.0308913850260275 0.0 18 5.626436147826733E-5 0.0 0.0 4.310243939765625 0.0 19 5.626436147826733E-5 0.0 0.0 4.452198923775294 0.0 20 5.626436147826733E-5 0.0 0.0 4.606419538587224 0.0 21 5.626436147826733E-5 0.0 0.0 4.805201527689943 0.0 22 5.626436147826733E-5 0.0 0.0 5.010341389639706 0.0 23 5.626436147826733E-5 0.0 0.0 5.2324730887559046 0.0 24 5.626436147826733E-5 0.0 0.0 5.404191919987577 0.0 25 5.626436147826733E-5 0.0 0.0 5.547497248672724 0.0 26 5.626436147826733E-5 0.0 0.0 5.684557233233783 0.0 27 5.626436147826733E-5 0.0 0.0 5.815540666755189 0.0 28 5.626436147826733E-5 0.0 0.0 5.953557145461379 0.0 29 5.626436147826733E-5 0.0 0.0 6.106483679959309 0.0 30 5.626436147826733E-5 0.0 0.0 6.304140381832463 0.0 31 5.626436147826733E-5 0.0 0.0 6.484974039623614 0.0 32 5.626436147826733E-5 0.0 0.0 6.6565803421323295 0.0 33 5.626436147826733E-5 0.0 0.0 6.825598484013044 0.0 34 5.626436147826733E-5 0.0 0.0 6.997035993437325 0.0 35 5.626436147826733E-5 0.0 0.0 7.220799359036394 0.0 36 5.626436147826733E-5 0.0 0.0 7.413279739653547 0.0 37 5.626436147826733E-5 0.0 0.0 7.600077419761394 0.0 38 5.626436147826733E-5 0.0 0.0 7.784962111578981 0.0 39 5.626436147826733E-5 0.0 0.0 7.969284159781784 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTG 40 6.8193913E-9 45.0 32 CGTATAT 20 7.0343283E-4 45.0 27 CGAGTGT 50 2.1827873E-11 45.0 28 CGACGGT 105 0.0 45.0 28 GACACGT 20 7.0343283E-4 45.0 12 CGTTGCA 20 7.0343283E-4 45.0 11 ATAGCCG 20 7.0343283E-4 45.0 1 CCTCGAA 20 7.0343283E-4 45.0 13 AAACGTC 25 3.8916693E-5 45.0 36 CGTACTC 20 7.0343283E-4 45.0 15 TACTCGC 100 0.0 45.0 45 ACCGTTA 25 3.8916693E-5 45.0 40 CCGCGTA 25 3.8916693E-5 45.0 27 CCAACGA 20 7.0343283E-4 45.0 33 CGATCCA 20 7.0343283E-4 45.0 24 GCGTATT 25 3.8916693E-5 45.0 29 GTAACGT 25 3.8916693E-5 45.0 31 TCGAAAC 20 7.0343283E-4 45.0 23 GTACGGA 35 1.2124292E-7 45.0 18 TGCGTAA 25 3.8916693E-5 45.0 22 >>END_MODULE