##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547635_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1517480 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.266354087039037 31.0 31.0 33.0 30.0 34.0 2 31.664789651263938 31.0 31.0 34.0 30.0 34.0 3 31.809039987347443 31.0 31.0 34.0 30.0 34.0 4 35.58374937396209 37.0 35.0 37.0 33.0 37.0 5 35.47623823707726 37.0 35.0 37.0 33.0 37.0 6 35.528557872261906 37.0 35.0 37.0 33.0 37.0 7 35.83041885230777 37.0 35.0 37.0 35.0 37.0 8 35.833567493476025 37.0 35.0 37.0 35.0 37.0 9 37.66361072304083 39.0 37.0 39.0 35.0 39.0 10 37.07371431583942 39.0 37.0 39.0 33.0 39.0 11 36.78505153280439 39.0 35.0 39.0 32.0 39.0 12 36.24687837730975 38.0 35.0 39.0 32.0 39.0 13 36.055703534807705 38.0 35.0 39.0 32.0 39.0 14 37.06231581305849 39.0 35.0 41.0 31.0 41.0 15 37.26214249940691 39.0 35.0 41.0 32.0 41.0 16 37.36431056751984 39.0 35.0 41.0 32.0 41.0 17 37.24847773941008 39.0 35.0 41.0 32.0 41.0 18 37.16400216147824 39.0 35.0 41.0 32.0 41.0 19 37.120068139283546 39.0 35.0 41.0 32.0 41.0 20 36.95479281440283 39.0 35.0 41.0 31.0 41.0 21 36.82668634841975 39.0 35.0 41.0 31.0 41.0 22 36.7889863457838 38.0 35.0 41.0 31.0 41.0 23 36.7275852070538 38.0 35.0 41.0 31.0 41.0 24 36.629174684345095 38.0 35.0 40.0 31.0 41.0 25 36.56995545246066 38.0 35.0 40.0 31.0 41.0 26 36.433810659778054 38.0 35.0 40.0 31.0 41.0 27 36.344022985475924 38.0 35.0 40.0 30.0 41.0 28 36.368948519914596 38.0 35.0 40.0 30.0 41.0 29 36.37256108811978 38.0 35.0 40.0 30.0 41.0 30 36.41634881514089 38.0 35.0 40.0 30.0 41.0 31 36.35201584205393 38.0 35.0 40.0 30.0 41.0 32 36.22082861059124 38.0 35.0 41.0 30.0 41.0 33 36.10262079236629 38.0 35.0 41.0 30.0 41.0 34 35.99769749848433 38.0 35.0 41.0 30.0 41.0 35 35.834605398423705 38.0 35.0 41.0 29.0 41.0 36 35.754228721301104 38.0 35.0 40.0 29.0 41.0 37 35.71301104462662 38.0 35.0 40.0 29.0 41.0 38 35.632485436381366 38.0 35.0 40.0 28.0 41.0 39 35.57073964731001 38.0 35.0 40.0 28.0 41.0 40 35.48759192872394 38.0 34.0 40.0 27.0 41.0 41 35.403285051532805 38.0 34.0 40.0 27.0 41.0 42 35.37206948361758 38.0 34.0 40.0 27.0 41.0 43 35.32874172970978 38.0 34.0 40.0 27.0 41.0 44 35.23667527743364 38.0 34.0 40.0 27.0 41.0 45 35.146455966470725 38.0 34.0 40.0 26.0 41.0 46 35.12971109998155 38.0 34.0 40.0 26.0 41.0 47 35.05740438094736 37.0 34.0 40.0 26.0 41.0 48 34.95116640746501 37.0 34.0 40.0 26.0 41.0 49 34.886428157208 37.0 34.0 40.0 26.0 41.0 50 34.79336861111843 37.0 34.0 40.0 26.0 41.0 51 34.36881738144819 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 0.0 8 0.0 9 0.0 10 1.0 11 1.0 12 6.0 13 2.0 14 20.0 15 25.0 16 109.0 17 248.0 18 592.0 19 1176.0 20 2170.0 21 3533.0 22 5525.0 23 8069.0 24 11321.0 25 15726.0 26 20566.0 27 24362.0 28 27052.0 29 31284.0 30 37252.0 31 45965.0 32 57261.0 33 73193.0 34 118563.0 35 168616.0 36 111028.0 37 141671.0 38 218285.0 39 393732.0 40 125.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.99551888657511 23.76123573292564 28.095856288056513 13.147389092442735 2 30.418391016685558 26.942035479874527 29.239792287213014 13.399781216226902 3 28.028969080317367 26.9871761077576 31.00798692569259 13.975867886232438 4 25.42900071170625 27.88208081819859 31.802066584073597 14.886851886021562 5 23.9428526240873 32.35008039644674 29.31340116508949 14.393665814376465 6 21.653728549964416 41.73676094577853 26.616759364209088 9.992751140047975 7 87.42316208450853 3.62779081108153 7.385204417850646 1.5638426865592956 8 87.75799351556527 3.89138571842792 6.26163112528666 2.088989640720141 9 82.66132008329599 5.5690355062340196 7.961422885309856 3.808221525160134 10 41.32192846034214 33.20650025041516 13.981205683106202 11.49036560613649 11 34.04894957429423 24.050728839918815 26.48575269525793 15.414568890529035 12 33.537641352769064 22.29782270606532 27.437000817144213 16.727535124021404 13 23.874252049450405 30.876914358014602 28.36861111843319 16.8802224741018 14 17.568995966997917 33.75088963281229 29.48869177847484 19.19142262171495 15 16.40634472941983 28.243403537443655 38.50792102696576 16.842330706170756 16 19.546946252998392 25.45173577246488 37.15844689880591 17.84287107573082 17 20.14464770540633 25.694243087223555 29.388855207317395 24.77225400005272 18 22.37360624192741 26.369375543664496 32.01215172522866 19.24486648917943 19 25.229063974484013 28.381000079078472 27.053404328228382 19.336531618209136 20 26.984078867596278 27.166025252392124 28.405514405461684 17.44438147454991 21 23.254540422279042 28.388446635211007 30.167448664891793 18.189564277618157 22 22.406753301526212 24.368756095632232 30.506036323378233 22.71845427946332 23 20.027941060178716 28.773229301209902 29.78991485884493 21.408914779766455 24 20.669201571025646 26.42703692964652 34.64737591269736 18.256385586630465 25 19.2826264596568 29.88645649366054 30.64580752299866 20.185109523684 26 18.446239818646703 33.00504784247568 28.20676384532251 20.341948493555105 27 18.272267179798085 33.07615256873237 29.979505495953816 18.672074755515723 28 16.712510214302657 30.48633260405409 34.16967604185887 18.631481139784377 29 18.090320795002242 27.27166091151119 33.70897804254422 20.92904025094235 30 19.209347075414502 30.582149352874506 31.362983367161345 18.845520204549647 31 24.339694757097295 28.391807470279673 27.869296465192296 19.39920130743074 32 24.9791101035928 28.95840472362074 27.638321427630018 18.424163745156445 33 23.842884255476186 28.577312386324692 27.786923056646547 19.79288030155257 34 19.468394970609168 28.747199304109444 29.82543427260985 21.958971452671534 35 19.78826739067401 28.57935524685663 30.645543928091307 20.986833434378045 36 24.399728497245434 27.986332604054088 28.67134986952052 18.942589029179956 37 19.664048290587026 31.217215383398795 29.908137174789783 19.210599151224397 38 20.155784590241716 30.431966154413896 28.75484355642249 20.657405698921895 39 20.153544033529272 30.56231383609669 28.643211113161293 20.640931017212747 40 22.406160212984684 27.93756754619501 29.14226217149485 20.51401006932546 41 18.823707725966734 26.972348894219362 29.97561747107046 24.228325908743443 42 20.830192160687456 27.083520046392707 28.252036270659254 23.83425152226059 43 20.89325724227008 28.082281150328175 28.547328465614047 22.4771331417877 44 19.973376914358017 30.15183066663152 28.507393837151067 21.367398581859398 45 18.3882489390305 32.92807812953053 27.031196457284445 21.65247647415452 46 20.929369744576533 31.562920104383586 27.237591269736665 20.270118881303215 47 18.914318475367057 29.32091361994886 30.177333473917283 21.5874344307668 48 20.909995518886575 27.389026544007173 31.010161583678205 20.69081635342805 49 20.102538418957746 27.57301578933495 30.97965047315286 21.344795318554446 50 18.863049265888183 29.776076126209244 30.517370904394127 20.843503703508446 51 18.39497060916783 31.437251232306192 27.73255660700635 22.435221551519625 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 757.0 1 1397.5 2 2038.0 3 7560.0 4 13082.0 5 9443.5 6 5805.0 7 5907.5 8 6010.0 9 6363.5 10 6717.0 11 6691.5 12 6666.0 13 6656.0 14 6646.0 15 6685.0 16 6724.0 17 6498.5 18 6273.0 19 6212.0 20 6151.0 21 6663.5 22 7176.0 23 8463.5 24 9751.0 25 11404.5 26 15676.0 27 18294.0 28 22826.5 29 27359.0 30 31693.5 31 36028.0 32 41385.5 33 46743.0 34 53417.5 35 60092.0 36 63440.0 37 66788.0 38 73966.0 39 81144.0 40 93428.5 41 105713.0 42 115755.0 43 125797.0 44 128646.0 45 131495.0 46 140648.0 47 149801.0 48 137230.5 49 124660.0 50 117443.5 51 110227.0 52 96444.5 53 82662.0 54 73051.5 55 63441.0 56 58289.5 57 53138.0 58 47010.5 59 40883.0 60 36482.5 61 32082.0 62 26982.0 63 21882.0 64 18764.0 65 15646.0 66 12934.5 67 10223.0 68 8450.5 69 6678.0 70 5572.5 71 4467.0 72 3416.0 73 2365.0 74 1892.5 75 1086.5 76 753.0 77 612.5 78 472.0 79 367.0 80 262.0 81 157.5 82 53.0 83 42.5 84 32.0 85 18.0 86 4.0 87 5.5 88 7.0 89 8.5 90 10.0 91 6.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1517480.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.755009450612803 #Duplication Level Percentage of deduplicated Percentage of total 1 77.26929901620788 16.03725031323621 2 7.301221462396115 3.0307384090609677 3 2.554715450046146 1.590694299280029 4 1.3964764909442196 1.1593553106842351 5 0.9413383724471415 0.9768743408182448 6 0.6373586695124946 0.7937031125497096 7 0.536862141076194 0.7799805168198842 8 0.43532336652407677 0.7228112469023834 9 0.3722954083842788 0.6954295247491913 >10 6.044635425453656 31.40790831460636 >50 2.132584690424873 31.30833759685713 >100 0.3727437771315978 9.628924151915427 >500 0.003216080907069524 0.46931777081936865 >1k 0.001608040453534762 0.8893741968990567 >5k 3.2160809070695245E-4 0.5093008948018465 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7630 0.5028072857632391 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCG 3828 0.2522603263304953 No Hit GAATCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTC 3424 0.2256372406885099 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGC 2803 0.18471413132298284 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2019 0.1330495294830904 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.589872683659751E-5 0.0 0.0 0.035124021403906476 0.0 2 6.589872683659751E-5 0.0 0.0 0.14728365447979544 0.0 3 6.589872683659751E-5 0.0 0.0 0.2255054432348367 0.0 4 6.589872683659751E-5 0.0 0.0 0.4558873922555816 0.0 5 6.589872683659751E-5 0.0 0.0 0.9474259957297625 0.0 6 6.589872683659751E-5 0.0 0.0 1.3231805361520415 0.0 7 6.589872683659751E-5 0.0 0.0 1.537746790732003 0.0 8 6.589872683659751E-5 0.0 0.0 2.0094498774283682 0.0 9 6.589872683659751E-5 0.0 0.0 2.161280544059889 0.0 10 6.589872683659751E-5 0.0 0.0 2.686361599493898 0.0 11 6.589872683659751E-5 0.0 0.0 3.0341750797374596 0.0 12 6.589872683659751E-5 0.0 0.0 3.5017924453699556 0.0 13 6.589872683659751E-5 0.0 0.0 3.6524369349184176 0.0 14 6.589872683659751E-5 0.0 0.0 3.7243324458971454 0.0 15 6.589872683659751E-5 0.0 0.0 3.8498695205208637 0.0 16 6.589872683659751E-5 0.0 0.0 4.036824208556291 0.0 17 6.589872683659751E-5 0.0 0.0 4.227205630387221 0.0 18 6.589872683659751E-5 0.0 0.0 4.452776972348894 0.0 19 6.589872683659751E-5 0.0 0.0 4.611988296386114 0.0 20 6.589872683659751E-5 0.0 0.0 4.758547064870707 0.0 21 6.589872683659751E-5 0.0 0.0 4.9456335503598075 0.0 22 6.589872683659751E-5 0.0 0.0 5.157036666051612 0.0 23 6.589872683659751E-5 0.0 0.0 5.37535914806126 0.0 24 6.589872683659751E-5 0.0 0.0 5.539315180430714 0.0 25 6.589872683659751E-5 0.0 0.0 5.6871260247252025 0.0 26 6.589872683659751E-5 0.0 0.0 5.824524870179508 0.0 27 6.589872683659751E-5 0.0 0.0 5.98525186493397 0.0 28 6.589872683659751E-5 0.0 0.0 6.137148430292327 0.0 29 6.589872683659751E-5 0.0 0.0 6.314086511848591 0.0 30 6.589872683659751E-5 0.0 0.0 6.546643118854944 0.0 31 6.589872683659751E-5 0.0 0.0 6.748952210243298 0.0 32 6.589872683659751E-5 0.0 0.0 6.932677860663732 0.0 33 6.589872683659751E-5 0.0 0.0 7.126683712470675 0.0 34 1.3179745367319502E-4 0.0 0.0 7.330772069483618 0.0 35 1.3179745367319502E-4 0.0 0.0 7.574267865144845 0.0 36 1.3179745367319502E-4 0.0 0.0 7.787779740095421 0.0 37 1.3179745367319502E-4 0.0 0.0 8.00241189340222 0.0 38 1.3179745367319502E-4 0.0 0.0 8.23424361441337 0.0 39 1.3179745367319502E-4 0.0 0.0 8.59853177636608 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTAGT 20 7.0340006E-4 45.000004 39 GCGATCG 20 7.0340006E-4 45.000004 9 GCGTATT 20 7.0340006E-4 45.000004 16 CCGCAAT 20 7.0340006E-4 45.000004 33 CGCATCG 25 3.8913982E-5 45.0 21 TCCGTAA 25 3.8913982E-5 45.0 28 TTACGCG 25 3.8913982E-5 45.0 1 TAAGTCG 30 2.1659635E-6 44.999996 1 TATAGCG 60 0.0 44.999996 1 TACCGAT 30 2.1659635E-6 44.999996 12 TTAATCG 170 0.0 42.35294 20 GTTAGCG 75 0.0 42.0 1 CGTTTTT 4710 0.0 41.990448 1 GGGCGAT 2045 0.0 41.259167 7 ACCCGCT 105 0.0 40.714287 34 CGGTCTA 190 0.0 40.263157 31 CGCACTC 45 1.9290383E-8 40.0 32 TAATCGT 180 0.0 40.0 21 TACGGGA 620 0.0 39.55645 4 AATGCGG 200 0.0 39.375 2 >>END_MODULE