SRR1547634_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547634_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1511693
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12124	0.8020146947826048	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4527	0.2994655660904694	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	1635	0.10815688105984482	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCCATC	50	2.1827873E-11	45.000004	9
TCGTTAG	55	1.8189894E-12	45.000004	1
CAACGAC	25	3.891391E-5	45.000004	1
TCCGATC	25	3.891391E-5	45.000004	23
CAATTCG	25	3.891391E-5	45.000004	18
CGCTAGG	55	1.8189894E-12	45.000004	2
GTCCGAT	25	3.891391E-5	45.000004	22
TCCAACG	25	3.891391E-5	45.000004	1
TACTAAG	25	3.891391E-5	45.000004	1
TAGTGCG	75	0.0	45.000004	1
TGTCGCG	25	3.891391E-5	45.000004	1
ATCGACC	25	3.891391E-5	45.000004	21
TACGTAG	100	0.0	45.000004	1
ACGCGAG	45	3.8562575E-10	45.0	1
CAACGCC	20	7.033994E-4	45.0	17
GCGCGTC	40	6.8175723E-9	45.0	38
TGGACGC	20	7.033994E-4	45.0	27
CATTGCG	20	7.033994E-4	45.0	1
TAACGCG	40	6.8175723E-9	45.0	1
CTGCGCG	20	7.033994E-4	45.0	1