##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547634_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1511693 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.182112373345646 31.0 31.0 33.0 30.0 34.0 2 31.551496897848967 31.0 31.0 34.0 30.0 34.0 3 31.594671007936135 31.0 31.0 34.0 30.0 34.0 4 35.41544414110537 37.0 35.0 37.0 33.0 37.0 5 35.31887162274351 37.0 35.0 37.0 33.0 37.0 6 35.37708185458291 37.0 35.0 37.0 33.0 37.0 7 35.82706938511986 37.0 35.0 37.0 35.0 37.0 8 35.87607669017453 37.0 35.0 37.0 35.0 37.0 9 37.72211553536333 39.0 37.0 39.0 35.0 39.0 10 37.01345511290983 39.0 37.0 39.0 33.0 39.0 11 36.61931159302848 39.0 35.0 39.0 32.0 39.0 12 35.53307847558995 37.0 35.0 39.0 31.0 39.0 13 35.080028153864575 37.0 35.0 39.0 30.0 39.0 14 35.936811905591945 38.0 35.0 40.0 30.0 41.0 15 36.33870964541081 38.0 35.0 40.0 31.0 41.0 16 36.56723818923551 38.0 35.0 40.0 32.0 41.0 17 36.49020138348197 37.0 35.0 40.0 32.0 41.0 18 36.4030057690285 37.0 35.0 40.0 31.0 41.0 19 36.296363745813466 37.0 35.0 40.0 31.0 41.0 20 36.05599285040018 36.0 35.0 40.0 31.0 41.0 21 35.82126595810128 36.0 34.0 40.0 30.0 41.0 22 35.7203651799671 35.0 34.0 40.0 30.0 41.0 23 35.72288950203514 35.0 34.0 40.0 30.0 41.0 24 35.5929206525399 35.0 34.0 40.0 30.0 41.0 25 35.50661741504393 35.0 34.0 40.0 30.0 41.0 26 35.34562970126871 35.0 34.0 40.0 30.0 41.0 27 35.30913882646807 35.0 34.0 40.0 30.0 41.0 28 35.33316486879281 36.0 34.0 40.0 30.0 41.0 29 35.393880238910945 36.0 34.0 40.0 30.0 41.0 30 35.387063378609284 36.0 34.0 40.0 30.0 41.0 31 35.18499457231065 35.0 34.0 40.0 29.0 41.0 32 34.93899555002239 35.0 34.0 40.0 29.0 41.0 33 34.730123113621616 35.0 34.0 40.0 27.0 41.0 34 34.58742019709028 35.0 34.0 40.0 26.0 41.0 35 34.39964794439083 35.0 34.0 40.0 25.0 41.0 36 34.20371464311867 35.0 33.0 40.0 24.0 41.0 37 34.14301911829981 35.0 33.0 40.0 23.0 41.0 38 34.10199756167423 35.0 33.0 40.0 23.0 41.0 39 34.10454172904154 35.0 33.0 40.0 23.0 41.0 40 33.98493146425895 35.0 33.0 40.0 23.0 41.0 41 33.94633169565514 35.0 33.0 40.0 23.0 41.0 42 33.90263433117703 35.0 33.0 40.0 23.0 41.0 43 33.79354405954119 35.0 33.0 40.0 23.0 41.0 44 33.68386901308665 35.0 33.0 40.0 23.0 41.0 45 33.57089038581246 35.0 33.0 40.0 23.0 41.0 46 33.51306052220921 35.0 33.0 39.0 23.0 41.0 47 33.47229298541437 35.0 33.0 39.0 23.0 41.0 48 33.38906180024648 35.0 33.0 39.0 23.0 41.0 49 33.388457841638484 35.0 33.0 39.0 22.0 41.0 50 33.26552348922698 35.0 33.0 39.0 22.0 41.0 51 32.83344303373767 35.0 32.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 1.0 13 3.0 14 8.0 15 23.0 16 125.0 17 296.0 18 821.0 19 1691.0 20 2919.0 21 4530.0 22 7187.0 23 10921.0 24 16009.0 25 24047.0 26 30987.0 27 34616.0 28 35423.0 29 39318.0 30 45326.0 31 54184.0 32 67717.0 33 87532.0 34 156600.0 35 269084.0 36 96855.0 37 107831.0 38 152479.0 39 265052.0 40 106.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.015159824117728 24.629339422753166 29.637896054291446 14.717604698837661 2 30.68414023217677 25.87628572732691 30.51710896326172 12.922465077234596 3 27.32075891070475 24.99283915451087 34.34652406275613 13.33987787202825 4 24.263259802089447 27.633322374318066 33.38290248086086 14.720515342731627 5 21.22858278764273 31.831066228394256 33.36762160041754 13.572729383545468 6 19.555028699610304 40.32783111385711 29.609451125327695 10.507689061204887 7 86.16405579704345 3.429664621057318 8.80946065107135 1.5968189308278864 8 86.83297468467474 2.583725663874874 8.042373683016327 2.5409259684340673 9 83.51239305864353 4.267467005536177 9.938128971953962 2.2820109638663406 10 52.49240421170172 22.19590882540304 15.241255995761044 10.0704309671342 11 45.935451179571515 19.338516484497845 22.771422504437076 11.954609831493563 12 43.551501528418804 20.61304775506667 23.22627676386674 12.609173952647792 13 19.720670797575963 44.96415608195579 23.84928685917048 11.465886261297765 14 13.040610758930551 45.79507876268528 26.516627383999264 14.647683094384906 15 10.493532747720602 26.09683315329237 50.14020703939226 13.26942705959477 16 11.473692079013398 20.334353602219498 50.48214154593559 17.70981277283152 17 12.630871479857353 22.46124047673701 29.141895874360735 35.76599216904491 18 19.091442508498748 25.6628164581036 35.961534517921294 19.284206515476356 19 26.257646228433945 30.334730662905763 24.840294954068053 18.567328154592236 20 29.37818723775264 24.328352383718123 27.6243919896434 18.66906838888584 21 17.98890383166423 32.01681822962731 30.07211120247299 19.922166736235468 22 19.827636960679186 25.943825895866425 27.088899664151384 27.13963747930301 23 15.625527140762047 33.00002050680925 25.15418143763317 26.220270914795528 24 17.135688264746875 24.644884907186842 41.90076953455497 16.318657293511315 25 13.320363327739166 28.625918093157804 36.34620256890784 21.707516010195192 26 12.72421053745701 39.400658731634 28.478533670527018 19.39659706038197 27 13.859758562088995 39.18011130566855 29.78461896694633 17.17551116529613 28 11.210940316585443 31.266202859972232 41.358397505313576 16.164459318128745 29 10.852137305656639 25.540767867549825 41.69093857019911 21.916156256594427 30 14.648939963339117 35.46904034086286 33.144626587541254 16.737393108256768 31 27.160607345539074 31.378394951885074 25.093322519850258 16.367675182725595 32 26.29832909195187 30.57373421719886 25.804445743944044 17.323490946905228 33 24.255520135371402 33.716700414700604 23.10654345822862 18.921235991699373 34 14.802807183733735 31.611841822380605 27.319502041750543 26.265848952135123 35 15.398166162044808 30.335789078867204 30.566126852476 23.699917906611994 36 26.508556962293273 28.079378551068242 27.348277725702243 18.06378676093625 37 15.004435424388419 34.816460749636335 32.003257275121335 18.17584655085391 38 14.57240325912735 35.84801940605665 26.661762672711987 22.91781466210401 39 15.567578866873102 35.14503275466645 28.877358034997847 20.410030343462594 40 22.064599095186654 29.92413142086389 25.572784950383443 22.438484533566008 41 13.672948144894498 25.08849349702618 30.65000631742027 30.58855204065905 42 19.894317166250026 24.951759385007406 25.392060424967237 29.76186302377533 43 20.427295753833615 27.750211187059808 25.490360807386153 26.332132251720424 44 15.97116610317042 34.30061527042859 27.40271999671891 22.325498629682087 45 13.980219528700601 42.098759470342195 21.69600573661451 22.225015264342694 46 20.68468928545677 37.925491485374344 22.952808539829185 18.4370106893397 47 17.47656435532876 30.76107384237408 27.295687682618098 24.46667411967906 48 20.07947380850477 26.127130310188644 32.928246674423974 20.865149206882613 49 18.252317104068087 25.9700878419097 31.99161469954548 23.785980354476735 50 16.046512089425566 34.2637030137733 29.565460711930264 20.124324184870872 51 14.738309961083369 36.38543011047879 24.30983010439289 24.56642982404496 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1089.0 1 1233.5 2 1378.0 3 8757.5 4 16137.0 5 11728.0 6 7319.0 7 7945.0 8 8571.0 9 10048.0 10 11525.0 11 12260.0 12 12995.0 13 12754.5 14 12514.0 15 12009.0 16 11504.0 17 10645.5 18 9787.0 19 9297.5 20 8808.0 21 8768.5 22 8729.0 23 8322.0 24 7915.0 25 8440.0 26 10849.5 27 12734.0 28 14674.0 29 16614.0 30 21362.5 31 26111.0 32 30511.5 33 34912.0 34 39751.0 35 44590.0 36 48266.0 37 51942.0 38 61622.0 39 71302.0 40 93867.5 41 116433.0 42 151854.5 43 187276.0 44 189509.5 45 191743.0 46 182834.5 47 173926.0 48 164341.0 49 154756.0 50 135557.0 51 116358.0 52 93510.0 53 70662.0 54 57788.5 55 44915.0 56 36053.5 57 27192.0 58 22464.0 59 17736.0 60 14044.5 61 10353.0 62 8739.5 63 7126.0 64 5317.5 65 3509.0 66 2696.0 67 1883.0 68 1357.5 69 832.0 70 696.5 71 561.0 72 425.5 73 290.0 74 270.0 75 197.5 76 145.0 77 157.5 78 170.0 79 128.0 80 86.0 81 57.5 82 29.0 83 20.5 84 12.0 85 9.0 86 6.0 87 4.5 88 3.0 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1511693.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.734878519067212 #Duplication Level Percentage of deduplicated Percentage of total 1 77.90451625743381 20.827677782291897 2 9.535940954101857 5.0988444594582205 3 3.6335275629542765 2.914257539737948 4 1.8703168523568248 2.0001077535969554 5 1.1622893974390365 1.5536832922266237 6 0.8040193152603906 1.2897215232282089 7 0.5877789245147247 1.09999387000784 8 0.47126820035265926 1.0079438469062219 9 0.35036606625301797 0.84302947966301 >10 2.2495759650328724 12.136812691803915 >50 0.5862613332352624 11.45862489272661 >100 0.8358608374431271 37.09427885579555 >500 0.006271464865324529 1.0481190209156328 >1k 0.0017560101622908682 0.8137878295233097 >5k 0.0 0.0 >10k+ 2.5085859461298116E-4 0.8131171621180657 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12124 0.8020146947826048 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4527 0.2994655660904694 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1635 0.10815688105984482 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.615099759011916E-5 0.0 0.0 0.08659165584546598 0.0 2 6.615099759011916E-5 0.0 0.0 0.3168632784566708 0.0 3 6.615099759011916E-5 0.0 0.0 0.5010276557475625 0.0 4 6.615099759011916E-5 0.0 0.0 0.9368304278712675 0.0 5 6.615099759011916E-5 0.0 0.0 1.6272483897193413 0.0 6 6.615099759011916E-5 0.0 0.0 2.4806624096294683 0.0 7 6.615099759011916E-5 0.0 0.0 2.898405959411071 0.0 8 6.615099759011916E-5 0.0 0.0 4.0273388842840445 0.0 9 6.615099759011916E-5 0.0 0.0 4.365899689950274 0.0 10 6.615099759011916E-5 0.0 0.0 5.040309110381539 0.0 11 6.615099759011916E-5 0.0 0.0 5.89021712741939 0.0 12 6.615099759011916E-5 0.0 0.0 6.525200553286944 0.0 13 6.615099759011916E-5 0.0 0.0 6.8102452019027675 0.0 14 6.615099759011916E-5 0.0 0.0 6.907487168360243 0.0 15 1.3230199518023833E-4 0.0 0.0 7.059436009824746 0.0 16 1.3230199518023833E-4 0.0 0.0 7.464809323056996 0.0 17 1.3230199518023833E-4 0.0 0.0 7.939310428770921 0.0 18 1.3230199518023833E-4 0.0 0.0 8.513038030870025 0.0 19 1.3230199518023833E-4 0.0 0.0 8.793253656661769 0.0 20 1.3230199518023833E-4 0.0 0.0 9.0929838267426 0.0 21 1.3230199518023833E-4 0.0 0.0 9.52693437093378 0.0 22 1.3230199518023833E-4 0.0 0.0 9.967896920869515 0.0 23 1.3230199518023833E-4 0.0 0.0 10.530378853378298 0.0 24 1.3230199518023833E-4 0.0 0.0 10.89176175321312 0.0 25 1.3230199518023833E-4 0.0 0.0 11.206309746754135 0.0 26 1.3230199518023833E-4 0.0 0.0 11.490031375418157 0.0 27 1.3230199518023833E-4 0.0 0.0 11.75860442563404 0.0 28 1.3230199518023833E-4 0.0 0.0 12.075533855088302 0.0 29 1.3230199518023833E-4 0.0 0.0 12.41343315077863 0.0 30 1.3230199518023833E-4 0.0 0.0 12.789567723076049 0.0 31 1.3230199518023833E-4 0.0 0.0 13.160608668559027 0.0 32 1.3230199518023833E-4 0.0 0.0 13.494671206389128 0.0 33 1.3230199518023833E-4 0.0 0.0 13.816429658667468 0.0 34 1.3230199518023833E-4 0.0 0.0 14.141627962820493 0.0 35 1.3230199518023833E-4 0.0 0.0 14.582855116746588 0.0 36 1.3230199518023833E-4 0.0 0.0 14.924988076282684 0.0 37 1.3230199518023833E-4 0.0 0.0 15.270031679712746 0.0 38 1.3230199518023833E-4 0.0 0.0 15.598868288733229 0.0 39 1.3230199518023833E-4 0.0 0.0 15.920560590013977 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCCATC 50 2.1827873E-11 45.000004 9 TCGTTAG 55 1.8189894E-12 45.000004 1 CAACGAC 25 3.891391E-5 45.000004 1 TCCGATC 25 3.891391E-5 45.000004 23 CAATTCG 25 3.891391E-5 45.000004 18 CGCTAGG 55 1.8189894E-12 45.000004 2 GTCCGAT 25 3.891391E-5 45.000004 22 TCCAACG 25 3.891391E-5 45.000004 1 TACTAAG 25 3.891391E-5 45.000004 1 TAGTGCG 75 0.0 45.000004 1 TGTCGCG 25 3.891391E-5 45.000004 1 ATCGACC 25 3.891391E-5 45.000004 21 TACGTAG 100 0.0 45.000004 1 ACGCGAG 45 3.8562575E-10 45.0 1 CAACGCC 20 7.033994E-4 45.0 17 GCGCGTC 40 6.8175723E-9 45.0 38 TGGACGC 20 7.033994E-4 45.0 27 CATTGCG 20 7.033994E-4 45.0 1 TAACGCG 40 6.8175723E-9 45.0 1 CTGCGCG 20 7.033994E-4 45.0 1 >>END_MODULE