##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547633_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1340538 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.424950281155773 31.0 31.0 33.0 30.0 34.0 2 31.832348654047852 31.0 31.0 34.0 30.0 34.0 3 31.962405392461832 33.0 31.0 34.0 30.0 34.0 4 35.7044738754142 37.0 35.0 37.0 33.0 37.0 5 35.625359370640744 37.0 35.0 37.0 33.0 37.0 6 35.67884759700956 37.0 35.0 37.0 33.0 37.0 7 35.993862911756324 37.0 35.0 37.0 35.0 37.0 8 36.034779319944676 37.0 35.0 37.0 35.0 37.0 9 37.892214916697625 39.0 38.0 39.0 35.0 39.0 10 37.32728874526496 39.0 37.0 39.0 34.0 39.0 11 36.93818451994647 39.0 37.0 39.0 33.0 39.0 12 36.02290796680139 37.0 35.0 39.0 32.0 39.0 13 35.68490412058442 37.0 35.0 39.0 31.0 39.0 14 36.62935328950019 38.0 35.0 41.0 31.0 41.0 15 36.97210149954719 38.0 35.0 41.0 32.0 41.0 16 37.130786296248225 38.0 35.0 41.0 33.0 41.0 17 37.03986608361718 38.0 35.0 41.0 32.0 41.0 18 37.00343220408523 38.0 35.0 41.0 32.0 41.0 19 36.92452433276789 38.0 35.0 41.0 32.0 41.0 20 36.74209608381113 38.0 35.0 40.0 32.0 41.0 21 36.56599514523273 38.0 35.0 40.0 32.0 41.0 22 36.48518803644507 38.0 35.0 40.0 31.0 41.0 23 36.47239690333284 38.0 35.0 40.0 31.0 41.0 24 36.41568758214985 37.0 35.0 40.0 31.0 41.0 25 36.30008772597271 37.0 35.0 40.0 31.0 41.0 26 36.19873737260712 37.0 35.0 40.0 31.0 41.0 27 36.15493779363211 37.0 35.0 40.0 31.0 41.0 28 36.20576216414604 37.0 35.0 40.0 31.0 41.0 29 36.28480356394224 37.0 35.0 40.0 31.0 41.0 30 36.31850645039529 37.0 35.0 40.0 31.0 41.0 31 36.182544620145045 37.0 35.0 40.0 31.0 41.0 32 35.997745681211576 37.0 35.0 40.0 30.0 41.0 33 35.892995200434456 37.0 35.0 40.0 30.0 41.0 34 35.822418312647606 37.0 35.0 40.0 30.0 41.0 35 35.68535393998529 37.0 35.0 40.0 30.0 41.0 36 35.526438638815165 37.0 35.0 40.0 29.0 41.0 37 35.47944258200812 37.0 34.0 40.0 29.0 41.0 38 35.439178896830974 37.0 34.0 40.0 29.0 41.0 39 35.429440269503736 37.0 34.0 40.0 29.0 41.0 40 35.319891715117365 37.0 34.0 40.0 29.0 41.0 41 35.28940917750933 37.0 34.0 40.0 29.0 41.0 42 35.25625457838569 36.0 34.0 40.0 29.0 41.0 43 35.2150897624685 36.0 34.0 40.0 29.0 41.0 44 35.08929325390254 36.0 34.0 40.0 28.0 41.0 45 34.99939352707644 36.0 34.0 40.0 27.0 41.0 46 34.987275258142624 36.0 34.0 40.0 28.0 41.0 47 34.9559579810494 36.0 34.0 40.0 28.0 41.0 48 34.87443474187229 36.0 34.0 40.0 27.0 41.0 49 34.8342829520685 36.0 34.0 40.0 27.0 41.0 50 34.75117154455898 36.0 34.0 40.0 27.0 41.0 51 34.30872679476449 35.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 3.0 13 7.0 14 1.0 15 14.0 16 42.0 17 129.0 18 364.0 19 738.0 20 1331.0 21 2205.0 22 3671.0 23 5427.0 24 8378.0 25 12612.0 26 17158.0 27 20950.0 28 22892.0 29 26426.0 30 31542.0 31 39396.0 32 50405.0 33 68776.0 34 127420.0 35 222375.0 36 85628.0 37 106551.0 38 166631.0 39 319320.0 40 145.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.07644990294941 24.345598558190815 30.272323499967925 13.305628038891848 2 29.156652030751832 26.37015884667201 31.345698518057674 13.127490604518485 3 28.70608666072875 25.661040567294624 32.36290205872567 13.269970713250947 4 25.184291679907616 28.040980561535743 31.996631203293006 14.778096555263634 5 23.526524425268065 33.14497612152733 29.60639683470368 13.72210261850093 6 21.551272697976483 41.00182165667814 26.863319055483693 10.583586589861682 7 89.28654018013663 3.657934351730425 5.80281946502076 1.2527060031121833 8 90.66591174588113 2.469829277499034 5.299514075691998 1.5647449009278365 9 86.16488305441547 4.9182492402304145 6.865377930353336 2.0514897750007832 10 51.11417953090476 29.425499314454346 11.40415266109577 8.05616849354513 11 43.39183223452076 19.46733326470417 24.057952851765485 13.082881649009575 12 40.9231965076708 21.426322864402202 23.825135878281706 13.825344749645291 13 21.578276781411642 39.69906112322067 24.243027799286555 14.479634296081127 14 13.895465850278022 42.24497925459778 27.74691952037167 16.112635374752525 15 13.059682008268322 26.183144379346203 46.63746943391385 14.119704178471629 16 16.04169370804856 20.835142308535826 45.70836485053016 17.414799132885452 17 15.760239545615267 21.988559817028687 29.200664210936207 33.05053642641984 18 20.575619639279154 25.071053562077317 34.80386232990038 19.549464468743146 19 27.588624865539057 25.675885353492404 27.38803375958011 19.347456021388428 20 30.005639526816847 24.559467915120646 27.53857033519378 17.89632222286873 21 21.954543623530252 28.92793788762422 29.37141655066846 19.74610193817706 22 22.211977579151057 24.10606786230603 27.643602792311743 26.038351766231173 23 18.291312890794593 30.002208068700774 26.92053488972338 24.78594415078125 24 19.61951097246031 24.125090075775546 38.91407778071193 17.34132117105222 25 16.631829907097 26.809683873191208 35.38191382862701 21.176572391084775 26 15.766431089607307 36.57807536973961 27.854935854112306 19.800557686540778 27 16.651374298975487 36.6435714616072 29.769391095216996 16.935663144200312 28 14.279789159277842 30.2147346811504 39.461022365647224 16.04445379392453 29 15.074619294641407 24.79146432253319 38.99561220942637 21.13830417339904 30 17.381454311627124 32.25406515891381 33.23053878368237 17.133941745776696 31 28.47461243172517 28.1406420407329 26.36821932686727 17.016526200674654 32 27.792796623445216 27.628758006113962 28.19092036182488 16.387525008615945 33 26.5027175656341 29.372684698233098 25.636647375904303 18.487950360228506 34 18.53009761752371 29.18089602831102 29.2701885362444 23.018817817920866 35 19.907753454210177 27.401908785875523 31.214482543575787 21.475855216338516 36 28.278497140700225 25.91929508898666 29.296894232017294 16.50531353829582 37 19.495381704957264 32.48598696941079 30.53803771321663 17.480593612415312 38 18.313318980886777 34.25691774496508 26.0730393319697 21.356723942178437 39 19.49224863450346 32.41086787543509 29.048113518602232 19.04876997145922 40 23.87869646365862 27.622044283712953 26.722256288146994 21.777002964481422 41 16.931784104590843 25.5971856075695 30.219583480662244 27.251446807177416 42 21.383504234866894 24.792956260844527 27.116500986917192 26.707038517371384 43 22.11955200076387 25.85760343981297 27.43003182304418 24.592812736378978 44 18.126229916645407 31.64147528827978 28.854907507284388 21.377387287790427 45 17.174820855507267 38.321256092703074 24.35895140607726 20.144971645712392 46 21.977967055018212 34.03924394534135 25.77330892522256 18.209480074417883 47 20.552718386200166 29.180597640648752 27.538271947531513 22.728412025619566 48 22.379969833007348 24.98392436469537 32.329035059058384 20.30707074323891 49 20.14638898710816 24.743050924330383 33.351161996153785 21.759398092407675 50 18.616779233412256 32.56968470867667 29.688155054164824 19.125381003746256 51 17.685362145646003 33.517438520952034 26.404249637086007 22.392949696315956 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 735.0 1 1299.0 2 1863.0 3 6676.0 4 11489.0 5 8143.5 6 4798.0 7 4927.0 8 5056.0 9 5533.0 10 6010.0 11 6112.5 12 6215.0 13 6006.5 14 5798.0 15 5656.0 16 5514.0 17 5033.5 18 4553.0 19 4424.0 20 4295.0 21 4544.0 22 4793.0 23 5376.5 24 5960.0 25 7261.5 26 11020.5 27 13478.0 28 16820.5 29 20163.0 30 22243.5 31 24324.0 32 29460.0 33 34596.0 34 40289.0 35 45982.0 36 47207.0 37 48432.0 38 59244.5 39 70057.0 40 87729.5 41 105402.0 42 128240.0 43 151078.0 44 150700.5 45 150323.0 46 144002.0 47 137681.0 48 126749.5 49 115818.0 50 104523.5 51 93229.0 52 81682.5 53 70136.0 54 61156.0 55 52176.0 56 45099.5 57 38023.0 58 33503.5 59 28984.0 60 26107.5 61 23231.0 62 19645.5 63 16060.0 64 13090.0 65 10120.0 66 8319.0 67 6518.0 68 5094.5 69 3671.0 70 2987.0 71 2303.0 72 1904.0 73 1505.0 74 1140.5 75 696.5 76 617.0 77 365.5 78 114.0 79 96.5 80 79.0 81 46.5 82 14.0 83 9.0 84 4.0 85 2.5 86 1.0 87 0.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1340538.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.96389982231179 #Duplication Level Percentage of deduplicated Percentage of total 1 78.3856996529014 13.297271564136395 2 7.937258228463823 2.6929370690296053 3 2.548286431871423 1.2968662724646955 4 1.2599300428546238 0.8549330812042738 5 0.6992447127342725 0.5930958629052692 6 0.5084181698195148 0.5174852940396812 7 0.38979963360113445 0.462876535462844 8 0.28307956445646115 0.3841706698546448 9 0.27662651557675944 0.4223398048595387 >10 4.197409692310991 18.53959127898025 >50 2.0652427841672654 25.38546988632515 >100 1.4414460938839322 34.00088212872424 >500 0.006669244728025597 0.7342552324740302 >1k 4.446163152017064E-4 0.2520678979895438 >5k 4.446163152017064E-4 0.5657574215498409 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7501 0.5595514636660803 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3342 0.24930289182402884 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.047443638300443555 0.0 2 0.0 0.0 0.0 0.1772422713865627 0.0 3 0.0 0.0 0.0 0.26071621990573934 0.0 4 0.0 0.0 0.0 0.49316020881168604 0.0 5 0.0 0.0 0.0 0.7928160186432611 0.0 6 0.0 0.0 0.0 1.1501352442079225 0.0 7 0.0 0.0 0.0 1.3146214430325736 0.0 8 0.0 0.0 0.0 1.7943542070422471 0.0 9 0.0 0.0 0.0 1.934969392885543 0.0 10 0.0 0.0 0.0 2.199415458569619 0.0 11 0.0 0.0 0.0 2.5315955235882908 0.0 12 0.0 0.0 0.0 2.802083939433272 0.0 13 0.0 0.0 0.0 2.9098018855116377 0.0 14 0.0 0.0 0.0 2.9535902749493115 0.0 15 0.0 0.0 0.0 3.019981529803706 0.0 16 0.0 0.0 0.0 3.171637059150878 0.0 17 0.0 0.0 0.0 3.3678269470913915 0.0 18 0.0 0.0 0.0 3.607954418300712 0.0 19 0.0 0.0 0.0 3.7378276483023978 0.0 20 0.0 0.0 0.0 3.87806984956786 0.0 21 0.0 0.0 0.0 4.061429068030895 0.0 22 0.0 0.0 0.0 4.26582461668375 0.0 23 0.0 0.0 0.0 4.479693973613579 0.0 24 0.0 0.0 0.0 4.64052492357546 0.0 25 0.0 0.0 0.0 4.778753008120621 0.0 26 0.0 0.0 0.0 4.9102673702647746 0.0 27 0.0 0.0 0.0 5.047600291823134 0.0 28 0.0 0.0 0.0 5.189334431399931 0.0 29 0.0 0.0 0.0 5.346659326330175 0.0 30 0.0 0.0 0.0 5.545460106315524 0.0 31 0.0 0.0 0.0 5.731131829161128 0.0 32 0.0 0.0 0.0 5.8890534994159065 0.0 33 0.0 0.0 0.0 6.04936227096882 0.0 34 0.0 0.0 0.0 6.225038007128481 0.0 35 0.0 0.0 0.0 6.444502132725816 0.0 36 0.0 0.0 0.0 6.6324863599539885 0.0 37 0.0 0.0 0.0 6.839641994482812 0.0 38 0.0 0.0 0.0 7.019420560998644 0.0 39 0.0 0.0 0.0 7.229560072150137 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 55 1.8189894E-12 45.000004 1 CGAGTTA 30 2.1657725E-6 45.000004 37 TTTCGCG 25 3.8911538E-5 45.000004 1 GGCGTGA 25 3.8911538E-5 45.000004 8 CCGAGTT 30 2.1657725E-6 45.000004 36 TCCACGA 30 2.1657725E-6 45.000004 23 TCGTAAG 60 0.0 45.000004 1 ACCGTTC 30 2.1657725E-6 45.000004 27 CGCACTC 25 3.8911538E-5 45.000004 12 CGCGTCC 25 3.8911538E-5 45.000004 23 CCGCAAT 50 2.1827873E-11 45.000004 33 TTGATCG 20 7.033707E-4 45.0 20 CGGGTAC 20 7.033707E-4 45.0 6 CTATGCG 20 7.033707E-4 45.0 1 GTCGACG 20 7.033707E-4 45.0 13 CGCGGAT 35 1.2121382E-7 45.0 20 ATAGCGC 20 7.033707E-4 45.0 12 GCACGAG 20 7.033707E-4 45.0 1 AGCGGTG 20 7.033707E-4 45.0 41 AAACGCG 20 7.033707E-4 45.0 1 >>END_MODULE