##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547631_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1617043 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.168188477362694 31.0 31.0 33.0 30.0 34.0 2 31.550375592980522 31.0 31.0 34.0 30.0 34.0 3 31.66433421993107 31.0 31.0 34.0 30.0 34.0 4 35.445549067031614 37.0 35.0 37.0 33.0 37.0 5 35.34126736271082 37.0 35.0 37.0 33.0 37.0 6 35.38897295866591 37.0 35.0 37.0 33.0 37.0 7 35.813710581598635 37.0 35.0 37.0 35.0 37.0 8 35.833608630073535 37.0 35.0 37.0 35.0 37.0 9 37.651863308520554 39.0 37.0 39.0 35.0 39.0 10 36.94257852141223 39.0 37.0 39.0 32.0 39.0 11 36.6320945083093 39.0 35.0 39.0 32.0 39.0 12 35.76336065274702 37.0 35.0 39.0 31.0 39.0 13 35.4264994808425 37.0 35.0 39.0 30.0 39.0 14 36.347825011456095 38.0 35.0 40.0 31.0 41.0 15 36.642365725586764 38.0 35.0 41.0 31.0 41.0 16 36.806712622979106 38.0 35.0 41.0 32.0 41.0 17 36.72229866490873 38.0 35.0 40.0 32.0 41.0 18 36.65370927056362 38.0 35.0 40.0 31.0 41.0 19 36.56939364011965 37.0 35.0 40.0 31.0 41.0 20 36.379092578243124 37.0 35.0 40.0 31.0 41.0 21 36.187912751856324 37.0 35.0 40.0 31.0 41.0 22 36.09615205037838 37.0 35.0 40.0 30.0 41.0 23 36.07655455049742 37.0 35.0 40.0 31.0 41.0 24 35.96807877094177 37.0 34.0 40.0 30.0 41.0 25 35.87444366043451 37.0 34.0 40.0 30.0 41.0 26 35.72368947517165 36.0 34.0 40.0 30.0 41.0 27 35.65682483397164 36.0 34.0 40.0 30.0 41.0 28 35.686845062252516 36.0 34.0 40.0 30.0 41.0 29 35.71973287043078 36.0 34.0 40.0 30.0 41.0 30 35.77737512236842 36.0 35.0 40.0 30.0 41.0 31 35.61624891855071 36.0 34.0 40.0 30.0 41.0 32 35.44356148847 36.0 34.0 40.0 29.0 41.0 33 35.3199191363495 37.0 34.0 40.0 29.0 41.0 34 35.21048172497577 36.0 34.0 40.0 28.0 41.0 35 35.08674970300728 36.0 34.0 40.0 27.0 41.0 36 34.97008366506024 36.0 34.0 40.0 27.0 41.0 37 34.94030276251157 36.0 34.0 40.0 27.0 41.0 38 34.88365739191846 36.0 34.0 40.0 27.0 41.0 39 34.84639060309466 36.0 34.0 40.0 26.0 41.0 40 34.73736381778345 36.0 34.0 40.0 25.0 41.0 41 34.68833172649089 36.0 34.0 40.0 25.0 41.0 42 34.630026536090874 36.0 34.0 40.0 25.0 41.0 43 34.55720905380995 36.0 33.0 40.0 25.0 41.0 44 34.43380479059617 36.0 34.0 40.0 24.0 41.0 45 34.34807299496674 35.0 33.0 40.0 24.0 41.0 46 34.29834642616183 35.0 33.0 40.0 24.0 41.0 47 34.239447559526866 35.0 33.0 40.0 24.0 41.0 48 34.172631772933684 35.0 33.0 40.0 23.0 41.0 49 34.174247067022954 36.0 33.0 40.0 24.0 41.0 50 34.055253941917435 35.0 33.0 40.0 24.0 41.0 51 33.61076607115581 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 4.0 11 3.0 12 3.0 13 4.0 14 5.0 15 27.0 16 92.0 17 284.0 18 699.0 19 1364.0 20 2450.0 21 4052.0 22 6140.0 23 9378.0 24 14021.0 25 19976.0 26 26772.0 27 31320.0 28 34388.0 29 38819.0 30 45912.0 31 56516.0 32 69701.0 33 89873.0 34 153358.0 35 252369.0 36 109264.0 37 130739.0 38 188697.0 39 330683.0 40 130.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.67371368603062 24.681656579324112 29.425438902985263 13.219190831660011 2 29.446959666502377 26.656186632019065 30.70883087215368 13.188022829324886 3 27.586403082663853 25.35937510628969 33.5613214985625 13.492900312483961 4 24.784189412402764 27.8402615143815 32.43451163636341 14.941037436852328 5 21.892244052879235 32.55881259805707 30.999608544732578 14.549334804331115 6 20.631857037815323 39.955647437946915 28.74778221729416 10.6647133069436 7 86.94394645040362 3.5832071255990097 7.701836005597872 1.7710104183995108 8 86.39541434581517 3.5916793802020104 6.995175762178247 3.017730511804572 9 82.14537275755809 5.117118097663451 9.43895740558538 3.2985517391930825 10 47.46132292091181 24.99129584061772 15.556481800422128 11.990899438048338 11 40.92482389151061 21.041741005032026 23.91049588662763 14.122939216829733 12 39.23779392384742 20.278310471644847 25.025926954323417 15.457968650184316 13 20.476944645256808 40.058551318672414 25.229755794991227 14.23474824107955 14 14.982965820946012 41.25592207504686 27.029027675825567 16.73208442818156 15 13.431306403107401 26.032641061493106 46.184919015759014 14.35113351964048 16 14.053058576673594 22.008876696538064 44.95495790773653 18.983106819051812 17 14.90554054530399 24.258971468291197 28.330539138414995 32.504948847989816 18 20.3065100928052 25.229508429893333 34.61757046658624 19.846411010715237 19 25.58608521851305 29.396064297609897 25.384668187549742 19.63318229632731 20 28.342474504388566 24.946955646819536 27.694439789170726 19.016130059621172 21 19.35780310109255 31.53688553736666 28.840049398810052 20.265261962730737 22 20.49141550348383 25.429070222622403 27.00509510260395 27.074419171289815 23 17.40077412907387 31.05198810421244 26.467818109969866 25.079419656743823 24 18.933757482021196 25.544775247164115 38.18154495582369 17.339922314991004 25 15.52624141720412 28.226212908376585 34.17880662418995 22.06873905022934 26 14.814881236924435 36.35803129539536 28.32503526498677 20.502052202693434 27 16.170627497227965 35.78488636356609 29.261868732000323 18.78261740720562 28 13.716332837160175 29.599707614454285 38.27251347057562 18.411446077809927 29 13.565811175089346 24.222732481449164 38.93804926646972 23.273407076991766 30 16.400615196998473 32.17830323621573 32.68268067082941 18.738400895956385 31 25.65571849357129 28.444017877075623 25.883170701088343 20.01709292826474 32 24.856234497165506 27.876067612302208 27.83982862546018 19.427869265072108 33 23.836719246179598 29.284688162281398 26.74715514677099 20.13143744476801 34 15.684616921133204 28.307657866859447 28.881792259080306 27.12593295292704 35 17.13460928373581 26.19621123247805 32.575447900890694 24.093731582895444 36 24.962539647987096 25.32288875434976 29.64219257001824 20.072379027644903 37 16.340010748013505 31.261382659582953 32.085665007053 20.312941585350544 38 15.984979991255644 32.47105982957781 28.22336820975076 23.32059196941578 39 17.34319990253815 31.12953706240341 30.761457796731438 20.765805238326994 40 21.963608883622758 27.149989208697605 27.754487666685424 23.13191424099421 41 14.722119325212748 24.284882962295992 31.68796377090776 29.305033941583496 42 19.910045682149455 24.07493183545521 27.332668333495153 28.682354148900185 43 20.122408618694738 25.6634486528806 28.271666245115313 25.942476483309353 44 16.858859040854203 30.772465543587895 28.849140066157798 23.51953534940011 45 15.37806972356332 37.29338057182153 24.73644794850848 22.592101756106672 46 20.888189120511946 33.21457747258422 25.4980850849359 20.39914832196794 47 17.771821775920614 28.07643334159945 29.620362600128754 24.53138228235118 48 19.87516720334586 24.516231170104938 33.430279837951126 22.178321788598076 49 18.706305274504142 23.690588314596457 32.74192461177594 24.86118179912346 50 16.798192750594758 30.53406743048886 30.781865417308012 21.88587440160837 51 14.978760614281747 32.12202767644398 27.27175467813781 25.627457031136462 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 866.0 1 1291.0 2 1716.0 3 7458.5 4 13201.0 5 9731.0 6 6261.0 7 6435.0 8 6609.0 9 7323.5 10 8038.0 11 8203.0 12 8368.0 13 8349.0 14 8330.0 15 8065.5 16 7801.0 17 7485.0 18 7169.0 19 7219.5 20 7270.0 21 7392.0 22 7514.0 23 7178.0 24 6842.0 25 8610.0 26 12945.0 27 15512.0 28 19177.5 29 22843.0 30 25975.5 31 29108.0 32 35123.0 33 41138.0 34 45983.0 35 50828.0 36 52201.5 37 53575.0 38 64783.0 39 75991.0 40 99775.0 41 123559.0 42 147444.0 43 171329.0 44 179701.0 45 188073.0 46 184654.5 47 181236.0 48 171649.0 49 162062.0 50 143571.0 51 125080.0 52 105470.0 53 85860.0 54 72800.5 55 59741.0 56 50536.5 57 41332.0 58 36054.5 59 30777.0 60 26051.0 61 21325.0 62 17621.5 63 13918.0 64 11327.5 65 8737.0 66 7281.0 67 5825.0 68 4718.5 69 3612.0 70 2959.0 71 2306.0 72 1910.0 73 1514.0 74 1103.0 75 498.5 76 305.0 77 278.5 78 252.0 79 165.0 80 78.0 81 56.0 82 34.0 83 19.5 84 5.0 85 7.5 86 10.0 87 12.5 88 15.0 89 10.0 90 5.0 91 2.5 92 0.0 93 0.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1617043.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.907129415565002 #Duplication Level Percentage of deduplicated Percentage of total 1 77.75403336776073 18.588757383052155 2 9.604891973652888 4.5925079087328236 3 3.5215161464511833 2.5256802675663064 4 1.6431616119877042 1.5713310923391381 5 0.9543406842911795 1.1407773122944047 6 0.6369738006545718 0.9136929051943892 7 0.4575733874041194 0.765748633285212 8 0.3626094524539376 0.6935160885698761 9 0.28394157395903025 0.6109405159587982 >10 2.8239577148388975 15.613884979309239 >50 1.0191209797505985 17.669104986170286 >100 0.9302798376996811 32.863989046110916 >500 0.004192810535442585 0.6393935512871073 >1k 0.003144607901581939 1.2878711771319873 >5k 2.620506584651616E-4 0.5228041529973457 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8345 0.5160654354893469 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4055 0.2507663679939247 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3705 0.22912192192786462 No Hit GCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTGC 1739 0.1075419763110814 RNA PCR Primer, Index 35 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.184127447445738E-5 0.0 0.0 0.10383149984261396 0.0 2 6.184127447445738E-5 0.0 0.0 0.3869408543866799 0.0 3 6.184127447445738E-5 0.0 0.0 0.5882960440755132 0.0 4 6.184127447445738E-5 0.0 0.0 1.083953858988289 0.0 5 6.184127447445738E-5 0.0 0.0 1.9233254774300992 0.0 6 6.184127447445738E-5 0.0 0.0 2.845935451314529 0.0 7 6.184127447445738E-5 0.0 0.0 3.274248118324621 0.0 8 6.184127447445738E-5 0.0 0.0 4.497035638508067 0.0 9 6.184127447445738E-5 0.0 0.0 4.853179538206467 0.0 10 6.184127447445738E-5 0.0 0.0 5.612652230027278 0.0 11 6.184127447445738E-5 0.0 0.0 6.454064610526745 0.0 12 6.184127447445738E-5 0.0 0.0 7.1260318989661995 0.0 13 6.184127447445738E-5 0.0 0.0 7.41087280919555 0.0 14 6.184127447445738E-5 0.0 0.0 7.5192187220747995 0.0 15 6.184127447445738E-5 0.0 0.0 7.686066480606885 0.0 16 6.184127447445738E-5 0.0 0.0 8.090755780767735 0.0 17 6.184127447445738E-5 0.0 0.0 8.573488769315349 0.0 18 6.184127447445738E-5 0.0 0.0 9.159063797313985 0.0 19 6.184127447445738E-5 0.0 0.0 9.479772646738523 0.0 20 6.184127447445738E-5 0.0 0.0 9.791514511364262 0.0 21 6.184127447445738E-5 0.0 0.0 10.262064768840409 0.0 22 6.184127447445738E-5 0.0 0.0 10.743993820819854 0.0 23 6.184127447445738E-5 0.0 0.0 11.334083261855127 0.0 24 6.184127447445738E-5 0.0 0.0 11.71607681428385 0.0 25 6.184127447445738E-5 0.0 0.0 12.069004967709578 0.0 26 6.184127447445738E-5 0.0 0.0 12.375985054200784 0.0 27 6.184127447445738E-5 0.0 0.0 12.696013649606101 0.0 28 6.184127447445738E-5 0.0 0.0 13.039418246762764 0.0 29 6.184127447445738E-5 0.0 0.0 13.40242652792783 0.0 30 6.184127447445738E-5 0.0 0.0 13.798334367113306 0.0 31 6.184127447445738E-5 0.0 0.0 14.192943539534818 0.0 32 6.184127447445738E-5 0.0 0.0 14.546675629528714 0.0 33 6.184127447445738E-5 0.0 0.0 14.905416862755041 0.0 34 6.184127447445738E-5 0.0 0.0 15.25723187324023 0.0 35 6.184127447445738E-5 0.0 0.0 15.696675969655724 0.0 36 6.184127447445738E-5 0.0 0.0 16.0669196799343 0.0 37 6.184127447445738E-5 0.0 0.0 16.466290630490345 0.0 38 6.184127447445738E-5 0.0 0.0 16.84426450007823 0.0 39 6.184127447445738E-5 0.0 0.0 17.209808273496748 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATAT 70 0.0 45.000004 9 ACAACGC 25 3.891512E-5 45.0 40 CGTATCG 20 7.034139E-4 45.0 37 CCTAGCG 20 7.034139E-4 45.0 1 GCGCGAA 20 7.034139E-4 45.0 18 CGGTTCA 20 7.034139E-4 45.0 41 CACGCAT 25 3.891512E-5 45.0 43 CGCGATT 20 7.034139E-4 45.0 43 CGCGATA 20 7.034139E-4 45.0 11 CCCACGT 20 7.034139E-4 45.0 29 AACGGTC 20 7.034139E-4 45.0 25 TACGCAA 20 7.034139E-4 45.0 1 CGAATTC 20 7.034139E-4 45.0 23 GCTAGCG 40 6.8175723E-9 45.0 1 ACGTACG 20 7.034139E-4 45.0 38 ACCAACG 20 7.034139E-4 45.0 31 CCGCGAT 20 7.034139E-4 45.0 10 GGTCTCG 20 7.034139E-4 45.0 10 CGCGTCA 20 7.034139E-4 45.0 39 TTCGCGA 25 3.891512E-5 45.0 1 >>END_MODULE