##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547628_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1390201 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.329562415794552 31.0 31.0 33.0 30.0 34.0 2 31.7310741396388 31.0 31.0 34.0 30.0 34.0 3 31.823484517706433 31.0 31.0 34.0 30.0 34.0 4 35.60342497236011 37.0 35.0 37.0 33.0 37.0 5 35.51115989702208 37.0 35.0 37.0 33.0 37.0 6 35.57043909477838 37.0 35.0 37.0 33.0 37.0 7 35.92937208360517 37.0 35.0 37.0 35.0 37.0 8 35.981468147411775 37.0 35.0 37.0 35.0 37.0 9 37.8571113098034 39.0 38.0 39.0 35.0 39.0 10 37.20633491128261 39.0 37.0 39.0 33.0 39.0 11 36.81081368809259 39.0 35.0 39.0 32.0 39.0 12 35.949702237302375 37.0 35.0 39.0 32.0 39.0 13 35.61072895214433 37.0 35.0 39.0 31.0 39.0 14 36.56117424746493 38.0 35.0 41.0 31.0 41.0 15 36.89414264555989 38.0 35.0 41.0 32.0 41.0 16 37.04860520169385 38.0 35.0 41.0 32.0 41.0 17 36.97404260247259 38.0 35.0 41.0 32.0 41.0 18 36.90763781640209 38.0 35.0 40.0 32.0 41.0 19 36.84292271405358 38.0 35.0 40.0 32.0 41.0 20 36.647332292236875 38.0 35.0 40.0 32.0 41.0 21 36.448311431224695 38.0 35.0 40.0 31.0 41.0 22 36.35853736258282 38.0 35.0 40.0 31.0 41.0 23 36.369645108872746 37.0 35.0 40.0 31.0 41.0 24 36.27441859126846 37.0 35.0 40.0 31.0 41.0 25 36.178044038236195 37.0 35.0 40.0 31.0 41.0 26 36.06772545840494 37.0 35.0 40.0 31.0 41.0 27 36.02996113511643 37.0 35.0 40.0 31.0 41.0 28 36.07335270223514 37.0 35.0 40.0 31.0 41.0 29 36.124711462587065 37.0 35.0 40.0 31.0 41.0 30 36.129170530016886 37.0 35.0 40.0 31.0 41.0 31 35.97968279407078 37.0 35.0 40.0 30.0 41.0 32 35.795986335788854 37.0 35.0 40.0 30.0 41.0 33 35.653315599686664 37.0 35.0 40.0 30.0 41.0 34 35.56416590118983 37.0 35.0 40.0 30.0 41.0 35 35.384355211944175 37.0 34.0 40.0 29.0 41.0 36 35.224563929964084 37.0 34.0 40.0 28.0 41.0 37 35.18582348883363 37.0 34.0 40.0 27.0 41.0 38 35.14450931915601 37.0 34.0 40.0 28.0 41.0 39 35.1312896480437 36.0 34.0 40.0 27.0 41.0 40 35.032167290916924 36.0 34.0 40.0 27.0 41.0 41 34.995028057093904 36.0 34.0 40.0 27.0 41.0 42 34.952997444254464 36.0 34.0 40.0 27.0 41.0 43 34.89691994179259 36.0 34.0 40.0 27.0 41.0 44 34.79223148307331 36.0 34.0 40.0 27.0 41.0 45 34.694758527723685 36.0 34.0 40.0 26.0 41.0 46 34.673946429329284 36.0 34.0 40.0 26.0 41.0 47 34.6281048567797 35.0 34.0 40.0 26.0 41.0 48 34.54041825606513 35.0 34.0 40.0 26.0 41.0 49 34.53192452026721 36.0 34.0 40.0 26.0 41.0 50 34.405800312328935 35.0 34.0 40.0 25.0 41.0 51 33.99782909090124 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 3.0 13 1.0 14 4.0 15 19.0 16 65.0 17 164.0 18 416.0 19 843.0 20 1615.0 21 2745.0 22 4436.0 23 6883.0 24 10615.0 25 15581.0 26 20904.0 27 23954.0 28 25803.0 29 29226.0 30 34352.0 31 42718.0 32 54333.0 33 71447.0 34 129912.0 35 228769.0 36 94883.0 37 110182.0 38 164422.0 39 315790.0 40 111.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.6344909836779 24.959700072147843 30.567018726069108 13.838790218105151 2 30.413299947273813 26.18671688482457 30.344532912866555 13.055450255035064 3 27.454231438475446 25.44373079863991 34.26209591274931 12.83994185013534 4 24.27828781593453 27.525875754657058 33.749148504424895 14.44668792498351 5 22.662118643275324 31.942071686036765 32.337410201834125 13.058399468853784 6 19.94884193005184 41.294028705201626 28.218581341834742 10.538548022911796 7 88.98044239645921 3.2253609370155827 6.585019000849518 1.2091776656756827 8 90.10243842437173 2.346998743347185 5.936983213218808 1.6135796190622795 9 86.54331280153013 4.25945600672133 7.356562108644721 1.8406690831038102 10 50.530462861125834 27.75087918941218 13.062355731293533 8.656302218168452 11 40.79043246264389 21.111911155293374 25.17952439970911 12.918131982353632 12 40.679441318197874 21.67593031511271 24.559973701644584 13.08465466504484 13 20.755487875494264 41.56514058039089 24.00861458163244 13.670756962482402 14 13.753550745539675 43.38538096289673 26.73296882968722 16.128099461876378 15 12.181116255850773 26.82691207962014 46.565640508099186 14.426331156429898 16 14.120116443593409 22.20592561795021 45.79733434230015 17.87662359615624 17 14.550198136816187 24.109175579646397 28.27806914251968 33.06255714101774 18 19.169026637155344 26.772027929774183 34.913296710331814 19.145648722738652 19 25.465166547858907 29.376111799660627 25.20196719754913 19.95675445493134 20 28.331514651478457 25.433444516296568 28.580903049271296 17.65413778295369 21 19.01976764511031 31.22231965018008 30.40495583012816 19.352956874581444 22 20.444813375907515 25.859066422769082 27.97178249763883 25.724337703684576 23 16.585515331955595 32.398840167716756 26.624063714527612 24.391580785800038 24 17.699814631121686 25.468475421899424 40.52442776260411 16.307282184374778 25 14.298651777692578 29.09866990456776 35.872222793682354 20.730455524057312 26 14.583358809265711 38.694980078420315 27.191895272697973 19.529765839615997 27 14.677230127154276 38.069674816807066 30.357696476984263 16.895398579054397 28 13.024375611871953 31.044215908347066 39.317911582569714 16.613496897211267 29 12.718160899035464 25.966173236819714 39.792087618984596 21.523578245160234 30 15.780236095355995 34.90732635065002 32.940704257873506 16.37173329612049 31 26.63262362780634 30.34956815597169 26.07328005087034 16.94452816535163 32 26.135645133329643 29.401288015186296 27.40538958035565 17.05767727112842 33 24.776992679475846 31.904307362748263 24.53048156345737 18.78821839431852 34 16.54508952302581 30.61168852561608 27.57536500117609 25.267856950182022 35 17.04480143518815 28.703187524681685 32.33654701730181 21.915464022828353 36 27.076012749235538 27.559971543683254 28.525227646937385 16.838788060143823 37 16.840802157385877 33.8282018211755 31.804177957000462 17.526818064438164 38 16.5624970777607 34.51982842768779 27.547599232053493 21.370075262498013 39 17.341664982257964 34.86093018203842 29.96286148549742 17.834543350206193 40 23.315333538099885 29.26943657787615 26.71376297384335 20.701466910180613 41 15.709023371440534 25.85698039348267 31.518895469072454 26.91510076600434 42 19.800158394361677 26.24433445235617 27.40049820133923 26.55500895194292 43 20.364393350314092 27.854317469200495 27.561194388437354 24.220094792048055 44 16.997757878177328 32.84150996870237 28.626507965394932 21.534224187725375 45 15.029769076557994 40.73353421555588 23.533287632507818 20.70340907537831 46 21.1888065107132 36.36912935611469 24.75152873577274 17.69053539739937 47 18.39978535477963 30.720737504864402 28.181392474901113 22.69808466545485 48 20.28555582969657 26.91826577595614 33.61377239694116 19.18240599740613 49 19.581484979510158 26.142262881410673 32.48630953365736 21.789942605421807 50 17.339938613193347 33.850644619015526 29.91445121964378 18.894965548147354 51 15.74204017980134 35.42293524461571 25.92301401020428 22.912010565378676 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 764.0 1 1088.0 2 1412.0 3 7491.5 4 13571.0 5 9683.5 6 5796.0 7 6169.0 8 6542.0 9 7599.0 10 8656.0 11 9376.0 12 10096.0 13 10027.5 14 9959.0 15 9204.0 16 8449.0 17 8012.0 18 7575.0 19 7332.0 20 7089.0 21 7521.5 22 7954.0 23 8459.5 24 8965.0 25 9992.0 26 13453.5 27 15888.0 28 17899.0 29 19910.0 30 24343.0 31 28776.0 32 35443.0 33 42110.0 34 47720.0 35 53330.0 36 54966.5 37 56603.0 38 64535.5 39 72468.0 40 95015.0 41 117562.0 42 134331.0 43 151100.0 44 153782.0 45 156464.0 46 152771.5 47 149079.0 48 133914.0 49 118749.0 50 108482.5 51 98216.0 52 84196.5 53 70177.0 54 59164.0 55 48151.0 56 39690.0 57 31229.0 58 26476.0 59 21723.0 60 17517.5 61 13312.0 62 10325.5 63 7339.0 64 6109.5 65 4880.0 66 3624.5 67 2369.0 68 1818.5 69 1268.0 70 960.0 71 652.0 72 523.0 73 394.0 74 318.5 75 191.0 76 139.0 77 115.5 78 92.0 79 93.0 80 94.0 81 51.5 82 9.0 83 15.5 84 22.0 85 11.5 86 1.0 87 1.5 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1390201.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.085248747046524 #Duplication Level Percentage of deduplicated Percentage of total 1 77.58960796535933 16.359961841354238 2 9.042529277079648 3.8132795821935037 3 3.266808428164797 2.0664440495040846 4 1.627489505477352 1.3726408422479082 5 1.000638869942267 1.0549359739348119 6 0.6461422237989124 0.8174441708861924 7 0.4921652176810924 0.7264198227615093 8 0.37385456904212383 0.6306253266778448 9 0.27779650199785005 0.5271667511115667 >10 3.2100241826004314 15.910579582645623 >50 1.3375950837259178 20.642370455809083 >100 1.1315452427532147 34.5963713724533 >500 0.0027657690015354766 0.3552229838683761 >1k 6.914422503838691E-4 0.42002766941300707 >5k 3.4572112519193457E-4 0.7065095751389906 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9692 0.6971653739279428 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3773 0.27139960336670743 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1989 0.14307283623015665 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.055243810067752794 0.0 2 0.0 0.0 0.0 0.19076378164020885 0.0 3 0.0 0.0 0.0 0.29894957635622477 0.0 4 0.0 0.0 0.0 0.5334480409667379 0.0 5 0.0 0.0 0.0 0.9251180225017821 0.0 6 0.0 0.0 0.0 1.4182121865830912 0.0 7 0.0 0.0 0.0 1.6641478462466939 0.0 8 0.0 0.0 0.0 2.3039833808204713 0.0 9 0.0 0.0 0.0 2.534885243213032 0.0 10 0.0 0.0 0.0 2.9543929259150294 0.0 11 0.0 0.0 0.0 3.509924104499997 0.0 12 0.0 0.0 0.0 3.931086224222253 0.0 13 0.0 0.0 0.0 4.113074296450657 0.0 14 0.0 0.0 0.0 4.1882432828058676 0.0 15 0.0 0.0 0.0 4.280316299585456 0.0 16 0.0 0.0 0.0 4.518339434369563 0.0 17 0.0 0.0 0.0 4.791896999067041 0.0 18 0.0 0.0 0.0 5.132854889328953 0.0 19 0.0 0.0 0.0 5.319662408529414 0.0 20 0.0 0.0 0.0 5.50459969457654 0.0 21 0.0 0.0 0.0 5.780890676959663 0.0 22 0.0 0.0 0.0 6.068331126218439 0.0 23 0.0 0.0 0.0 6.427343959614473 0.0 24 0.0 0.0 0.0 6.662345948535499 0.0 25 0.0 0.0 0.0 6.866561022470852 0.0 26 0.0 0.0 0.0 7.061640726772604 0.0 27 0.0 0.0 0.0 7.246578012819729 0.0 28 0.0 0.0 0.0 7.450505358577645 0.0 29 0.0 0.0 0.0 7.67493333697789 0.0 30 0.0 0.0 0.0 7.958201727663841 0.0 31 7.193204435905312E-5 0.0 0.0 8.22111334979618 0.0 32 7.193204435905312E-5 0.0 0.0 8.449641454724892 0.0 33 7.193204435905312E-5 0.0 0.0 8.682989006625661 0.0 34 7.193204435905312E-5 0.0 0.0 8.919501568478227 0.0 35 7.193204435905312E-5 0.0 0.0 9.22924095148831 0.0 36 7.193204435905312E-5 0.0 0.0 9.487045398471157 0.0 37 7.193204435905312E-5 0.0 0.0 9.742404155945795 0.0 38 7.193204435905312E-5 0.0 0.0 10.005891234433006 0.0 39 7.193204435905312E-5 0.0 0.0 10.253984855427381 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGGAT 35 1.2121745E-7 45.000004 4 TAGACGC 25 3.891228E-5 45.000004 36 GCGCGCG 25 3.891228E-5 45.000004 1 TTCGTAA 25 3.891228E-5 45.000004 20 CGCGAGT 25 3.891228E-5 45.000004 27 CCGCTAG 25 3.891228E-5 45.000004 1 ACCAACG 25 3.891228E-5 45.000004 33 TCGAGCG 25 3.891228E-5 45.000004 1 ACCCGCG 25 3.891228E-5 45.000004 24 ACTCCGA 25 3.891228E-5 45.000004 21 CGTCAGG 25 3.891228E-5 45.000004 2 CCCGCGA 25 3.891228E-5 45.000004 25 ATTTCGC 35 1.2121745E-7 45.000004 18 TCGTTAC 40 6.8175723E-9 45.0 43 GTCGATA 20 7.033798E-4 45.0 30 GGTCGAA 20 7.033798E-4 45.0 9 CGCATCG 45 3.8562575E-10 45.0 21 TAGCGCG 45 3.8562575E-10 45.0 1 CCTACGG 45 3.8562575E-10 45.0 2 GCGTTGC 20 7.033798E-4 45.0 35 >>END_MODULE