##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547627_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1940168 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.253694525422542 31.0 31.0 33.0 30.0 34.0 2 31.661438597069946 31.0 31.0 34.0 30.0 34.0 3 31.81159930480247 31.0 31.0 34.0 30.0 34.0 4 35.58651003418261 37.0 35.0 37.0 33.0 37.0 5 35.4877814704706 37.0 35.0 37.0 33.0 37.0 6 35.5230253256419 37.0 35.0 37.0 33.0 37.0 7 35.86750477278256 37.0 35.0 37.0 35.0 37.0 8 35.88875293273572 37.0 35.0 37.0 35.0 37.0 9 37.69311935873594 39.0 37.0 39.0 35.0 39.0 10 37.06620457609856 39.0 37.0 39.0 33.0 39.0 11 36.79787678180446 39.0 37.0 39.0 32.0 39.0 12 36.25280130380462 38.0 35.0 39.0 32.0 39.0 13 36.04630578382903 38.0 35.0 39.0 31.0 39.0 14 37.02273669084327 39.0 35.0 41.0 31.0 41.0 15 37.24420101764383 39.0 35.0 41.0 32.0 41.0 16 37.324860527541944 39.0 35.0 41.0 32.0 41.0 17 37.247979040990266 39.0 35.0 41.0 32.0 41.0 18 37.150251421526384 39.0 35.0 41.0 32.0 41.0 19 37.11941285496926 39.0 35.0 41.0 32.0 41.0 20 36.97791840706578 39.0 35.0 41.0 31.0 41.0 21 36.811219956209975 39.0 35.0 41.0 31.0 41.0 22 36.771151776547185 38.0 35.0 41.0 31.0 41.0 23 36.71586171919133 38.0 35.0 41.0 31.0 41.0 24 36.615892025845184 38.0 35.0 40.0 31.0 41.0 25 36.503240441033974 38.0 35.0 40.0 31.0 41.0 26 36.37604733198362 38.0 35.0 40.0 30.0 41.0 27 36.303913887869506 38.0 35.0 40.0 30.0 41.0 28 36.304882876122065 38.0 35.0 40.0 30.0 41.0 29 36.31909710911632 38.0 35.0 40.0 30.0 41.0 30 36.33265521336297 38.0 35.0 40.0 30.0 41.0 31 36.2463843337278 38.0 35.0 40.0 30.0 41.0 32 36.16960386935564 38.0 35.0 40.0 30.0 41.0 33 36.03858325670767 38.0 35.0 40.0 30.0 41.0 34 35.94880958762334 38.0 35.0 40.0 29.0 41.0 35 35.78403158901703 38.0 35.0 40.0 29.0 41.0 36 35.69311265828526 38.0 35.0 40.0 28.0 41.0 37 35.662751369984456 38.0 34.0 40.0 28.0 41.0 38 35.577769038557484 38.0 34.0 40.0 28.0 41.0 39 35.50590103537426 38.0 34.0 40.0 27.0 41.0 40 35.43108534930996 38.0 34.0 40.0 27.0 41.0 41 35.33746716779166 38.0 34.0 40.0 27.0 41.0 42 35.29933232586044 38.0 34.0 40.0 27.0 41.0 43 35.24757752936859 38.0 34.0 40.0 27.0 41.0 44 35.128688855810424 37.0 34.0 40.0 26.0 41.0 45 35.04638206588295 37.0 34.0 40.0 26.0 41.0 46 35.00435065417015 37.0 34.0 40.0 26.0 41.0 47 34.954934830385824 37.0 34.0 40.0 26.0 41.0 48 34.82180151409569 37.0 34.0 40.0 26.0 41.0 49 34.757420491421364 37.0 34.0 40.0 26.0 41.0 50 34.675781169465736 37.0 34.0 40.0 26.0 41.0 51 34.23312311098832 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 7.0 12 8.0 13 8.0 14 19.0 15 47.0 16 137.0 17 360.0 18 808.0 19 1668.0 20 2671.0 21 4293.0 22 6621.0 23 9853.0 24 14007.0 25 19909.0 26 26641.0 27 31718.0 28 36011.0 29 41156.0 30 49771.0 31 59623.0 32 74472.0 33 95232.0 34 153307.0 35 212285.0 36 145773.0 37 187943.0 38 281272.0 39 484416.0 40 131.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.178741222409606 22.713496975519647 28.96919235859987 14.138569443470875 2 30.308663991984197 25.619224726930863 30.49050391512488 13.58160736596006 3 28.719935593206365 25.540159408875933 32.13855707340807 13.60134792450963 4 25.875594278433624 28.60556405424685 30.81810441157673 14.700737255742801 5 23.329216851324215 32.13087732608722 29.693614161247893 14.846291661340668 6 21.659773792784957 40.60926682637792 27.11723933185167 10.61372004898545 7 88.85297561860622 3.4268681887341716 6.0909158382160715 1.6292403544435328 8 89.18841048816391 2.8749056782711597 5.832690777293513 2.103993056271416 9 83.87335529706705 5.33294024022662 7.850866522899048 2.9428379398072746 10 41.404043361193466 32.28070971173631 14.265259503300745 12.049987423769489 11 34.84291051084236 23.388541610829577 25.710660107784484 16.057887770543584 12 34.32187315737607 21.205740946144868 27.18156365840484 17.29082223807423 13 24.05497874410876 29.2615897180038 28.195599556327082 18.48783198156036 14 18.6342625999398 31.87620865821929 29.722735350753133 19.76679339108778 15 18.088897456302753 26.298856593861974 38.388634386300566 17.223611563534703 16 21.13801485232207 24.61297166018613 36.26041662371506 17.988596863776745 17 21.879754742888245 24.569367188820763 28.126430288511102 25.424447779779896 18 23.624449016786176 26.03279715983358 31.19369044330182 19.149063380078427 19 26.222935333435043 27.894697778749055 26.55790632563778 19.32446056217812 20 27.56354088924258 26.874528391355803 27.171203730810937 18.39072698859068 21 23.89123003781116 27.607609237962897 29.29694748083671 19.20421324338923 22 23.7070191859674 24.784090862234613 29.48456009995011 22.02432985184788 23 22.06350171737705 27.008125069581602 28.721533392984526 22.20683982005682 24 21.36443854346634 26.002902841403426 33.26072793696216 19.371930678168077 25 20.56332235146647 27.891759888834365 30.53725244411824 21.00766531558092 26 19.80168727656574 31.14415865017875 28.117822786480346 20.936331286775168 27 19.913481719108862 30.215785437137406 30.166717521369286 19.704015322384453 28 18.42459003550208 28.453309197966366 33.25851163404406 19.863589132487498 29 19.349870732843755 26.018571587615092 33.57296893877231 21.05858874076884 30 21.52236301186289 28.45459774617456 30.934176834171062 19.088862407791492 31 24.99113478832761 27.20011875260287 27.94263177209396 19.86611468697556 32 26.376478737923726 27.40035914415659 27.108064868609315 19.11509724931037 33 24.928717513122574 28.17034401144643 27.00518717966692 19.89575129576408 34 20.76315040759357 27.775635924311707 29.143816411774647 22.31739725632007 35 20.930352423089136 28.31677462982587 29.53594740249298 21.216925544592012 36 25.048552496484838 27.671624312946097 27.817333344328944 19.462489846240118 37 21.242387257185978 30.441384457428427 28.533199186874537 19.783029098511058 38 21.18533034252704 29.474251714284538 27.741824419328637 21.598593523859787 39 20.958030438601195 30.14764700788798 27.839135580011625 21.0551869734992 40 23.097896676988796 27.455972884822344 28.052158369790657 21.393972068398202 41 19.59639577603589 26.32040111990302 29.409566594233077 24.673636509828015 42 21.5752965722556 26.969520165264036 28.028191373118204 23.42699188936216 43 21.847334869970023 26.870611204802884 28.528457329468377 22.75359659575872 44 20.7885605782592 29.425647675871367 28.18348720317003 21.602304542699397 45 19.61273456731582 31.403929968951143 26.51007541614953 22.47326004758351 46 21.709563295549664 30.391646496592045 26.94637783944483 20.952412368413455 47 20.849534679471056 28.103854923903498 29.333645333806146 21.712965062819304 48 21.817749803109834 26.994930335929674 30.188004337768685 20.999315523191804 49 21.05817640534222 26.420031667360767 30.058273304167475 22.463518623129545 50 19.65979234787915 29.25370380296964 29.44817149855064 21.638332350600567 51 18.95974987733021 30.567507556046692 27.604310554549915 22.868432012073182 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 999.0 1 1734.5 2 2470.0 3 9597.5 4 16725.0 5 11843.5 6 6962.0 7 6959.0 8 6956.0 9 7283.5 10 7611.0 11 7872.0 12 8133.0 13 8034.0 14 7935.0 15 7854.5 16 7774.0 17 7383.5 18 6993.0 19 7129.5 20 7266.0 21 7554.0 22 7842.0 23 8855.5 24 9869.0 25 11655.5 26 18269.0 27 23096.0 28 26140.0 29 29184.0 30 33484.5 31 37785.0 32 44608.0 33 51431.0 34 59282.5 35 67134.0 36 70911.5 37 74689.0 38 83340.0 39 91991.0 40 105630.5 41 119270.0 42 135219.0 43 151168.0 44 156767.0 45 162366.0 46 164672.5 47 166979.0 48 163315.5 49 159652.0 50 153211.0 51 146770.0 52 133017.5 53 119265.0 54 108197.0 55 97129.0 56 89820.5 57 82512.0 58 74906.5 59 67301.0 60 61260.5 61 55220.0 62 48403.5 63 41587.0 64 35770.5 65 29954.0 66 24908.0 67 19862.0 68 16997.5 69 14133.0 70 11539.0 71 8945.0 72 7107.5 73 5270.0 74 4329.5 75 2466.0 76 1543.0 77 1190.5 78 838.0 79 609.5 80 381.0 81 267.5 82 154.0 83 144.0 84 134.0 85 86.5 86 39.0 87 22.0 88 5.0 89 5.0 90 5.0 91 4.5 92 4.0 93 4.0 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1940168.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.616721783169773 #Duplication Level Percentage of deduplicated Percentage of total 1 76.95507045389985 15.865612773522814 2 7.0455535644230265 2.9051243529225923 3 2.545143786224288 1.5741756401624836 4 1.4065603630344907 1.1599465470366548 5 0.9568639175338037 0.9863698586074169 6 0.6750554824202402 0.8350458641556927 7 0.5647470894838157 0.8150263535219897 8 0.47642037612499544 0.7857781077121704 9 0.4006565878160737 0.7434202861438307 >10 6.490918569275009 33.780992116798295 >50 2.1581138363198056 31.239813916547003 >100 0.3218619255478283 8.304576254618713 >500 0.0020226985979400892 0.2566722046775959 >1k 7.585119742275335E-4 0.23139072229160196 >5k 2.5283732474251115E-4 0.5160550012811127 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9900 0.5102650904457758 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5462578498356844E-4 0.0 0.0 0.03850182046090854 0.0 2 1.5462578498356844E-4 0.0 0.0 0.11504158402777491 0.0 3 1.5462578498356844E-4 0.0 0.0 0.19317914737280484 0.0 4 1.5462578498356844E-4 0.0 0.0 0.35321683483079813 0.0 5 1.5462578498356844E-4 0.0 0.0 0.6186577657192573 0.0 6 1.5462578498356844E-4 0.0 0.0 1.0614544719838694 0.0 7 1.5462578498356844E-4 0.0 0.0 1.283754808861913 0.0 8 1.5462578498356844E-4 0.0 0.0 1.869941159734621 0.0 9 1.5462578498356844E-4 0.0 0.0 2.1330111619199985 0.0 10 1.5462578498356844E-4 0.0 0.0 2.514833766972757 0.0 11 1.5462578498356844E-4 0.0 0.0 2.87851361325411 0.0 12 1.5462578498356844E-4 0.0 0.0 3.1861673834430833 0.0 13 1.5462578498356844E-4 0.0 0.0 3.3308455762593754 0.0 14 1.5462578498356844E-4 0.0 0.0 3.406612210901324 0.0 15 1.5462578498356844E-4 0.0 0.0 3.487223786806091 0.0 16 1.5462578498356844E-4 0.0 0.0 3.6424165330012657 0.0 17 1.5462578498356844E-4 0.0 0.0 3.813329567336437 0.0 18 1.5462578498356844E-4 0.0 0.0 4.022486712490877 0.0 19 1.5462578498356844E-4 0.0 0.0 4.145104959982847 0.0 20 1.5462578498356844E-4 0.0 0.0 4.291484036433959 0.0 21 1.5462578498356844E-4 0.0 0.0 4.475540262492733 0.0 22 1.5462578498356844E-4 0.0 0.0 4.674028228483307 0.0 23 1.5462578498356844E-4 0.0 0.0 4.884267754132632 0.0 24 1.5462578498356844E-4 0.0 0.0 5.050748182631607 0.0 25 1.5462578498356844E-4 0.0 0.0 5.197281884867702 0.0 26 1.5462578498356844E-4 0.0 0.0 5.338094433059405 0.0 27 1.5462578498356844E-4 0.0 0.0 5.488699947633401 0.0 28 1.5462578498356844E-4 0.0 0.0 5.642037184408773 0.0 29 1.5462578498356844E-4 0.0 0.0 5.818619830860008 0.0 30 1.5462578498356844E-4 0.0 0.0 6.045919734785854 0.0 31 1.5462578498356844E-4 0.0 0.0 6.232604599189348 0.0 32 1.5462578498356844E-4 0.0 0.0 6.419186379736188 0.0 33 1.5462578498356844E-4 0.0 0.0 6.595975193900735 0.0 34 1.5462578498356844E-4 0.0 0.0 6.785649490147245 0.0 35 1.5462578498356844E-4 0.0 0.0 7.0115577620082385 0.0 36 1.5462578498356844E-4 0.0 0.0 7.207623257367403 0.0 37 1.5462578498356844E-4 0.0 0.0 7.408636777846042 0.0 38 1.5462578498356844E-4 0.0 0.0 7.659336717232734 0.0 39 1.5462578498356844E-4 0.0 0.0 8.084093748582596 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCTCGA 25 3.8918013E-5 45.0 34 CGGTCTA 185 0.0 41.351353 31 CGTTTTT 5595 0.0 40.656837 1 TTTCGCG 80 0.0 39.375 1 TAGGGAC 1735 0.0 39.034584 5 CGTTAGG 385 0.0 38.57143 2 CGACGGT 195 0.0 38.076923 28 ACACCCG 65 9.094947E-12 38.07692 34 TAGGGCG 565 0.0 37.83186 5 GACCGAT 830 0.0 37.680725 9 ATAGGGC 935 0.0 37.54011 4 TCGGTAC 60 1.5643309E-10 37.500004 36 GTCGGTC 30 1.14021124E-4 37.500004 39 TAAGGGA 2480 0.0 37.288307 4 CGAGGGA 1345 0.0 37.137547 4 TATGGGC 710 0.0 37.077465 4 TAATGCG 85 0.0 37.058823 1 TACGGGA 685 0.0 36.788322 4 TATGGGA 2100 0.0 36.75 4 ATTGGGA 1845 0.0 36.707317 4 >>END_MODULE