SRR1547625_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547625_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1735013
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9983	0.5753847377512445	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	6945	0.40028518518305056	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	4798	0.27653971468801675	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGCTA	30	2.1661435E-6	45.000004	22
AGTCCGA	30	2.1661435E-6	45.000004	36
ACGCCAA	20	7.0342806E-4	45.000004	41
TTGTGCG	80	0.0	45.000004	1
CGACGAA	20	7.0342806E-4	45.000004	17
ACGTTAG	60	0.0	45.000004	1
CGTTGCC	20	7.0342806E-4	45.000004	40
GGTCCGT	30	2.1661435E-6	45.000004	9
TCGATGC	20	7.0342806E-4	45.000004	1
AAACGTC	20	7.0342806E-4	45.000004	28
CCCGTAG	20	7.0342806E-4	45.000004	1
CGCTCCG	40	6.8193913E-9	45.000004	28
GTATCGC	20	7.0342806E-4	45.000004	24
ACGCTAT	60	0.0	45.000004	15
ACGCTAG	20	7.0342806E-4	45.000004	35
TTACGCC	20	7.0342806E-4	45.000004	39
CGTCGAC	20	7.0342806E-4	45.000004	43
CCGGTAT	20	7.0342806E-4	45.000004	11
ACCGTAT	30	2.1661435E-6	45.000004	10
ATCGGAC	20	7.0342806E-4	45.000004	39