SRR1547624_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547624_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1130588
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6752	0.5972113625830099	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4337	0.383605698981415	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACACGAA	20	7.0332363E-4	45.000004	19
ACGCCAG	20	7.0332363E-4	45.000004	18
TTAGCGT	20	7.0332363E-4	45.000004	22
AGCCCCC	20	7.0332363E-4	45.000004	45
TGTGGCG	20	7.0332363E-4	45.000004	14
ACCGACT	20	7.0332363E-4	45.000004	25
TTCGTAG	75	0.0	45.000004	1
TCGATAG	65	0.0	45.000004	1
CTGCGTA	20	7.0332363E-4	45.000004	41
TACATGC	20	7.0332363E-4	45.000004	27
CGTTACA	20	7.0332363E-4	45.000004	20
TATTGAC	20	7.0332363E-4	45.000004	42
AATGCGT	40	6.8157533E-9	45.000004	14
GCCGACG	20	7.0332363E-4	45.000004	1
TCTACGT	20	7.0332363E-4	45.000004	34
CACTAGT	20	7.0332363E-4	45.000004	23
TCGTCGG	20	7.0332363E-4	45.000004	44
TGTTACG	20	7.0332363E-4	45.000004	1
ACGTCGT	20	7.0332363E-4	45.000004	34
GTATACT	20	7.0332363E-4	45.000004	13