##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547622_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2522308 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26357724750506 31.0 31.0 33.0 30.0 34.0 2 31.667844291815275 31.0 31.0 34.0 30.0 34.0 3 31.81294195633523 31.0 31.0 34.0 30.0 34.0 4 35.57833737989175 37.0 35.0 37.0 33.0 37.0 5 35.475039130827795 37.0 35.0 37.0 33.0 37.0 6 35.51925538038971 37.0 35.0 37.0 33.0 37.0 7 35.86908617028531 37.0 35.0 37.0 35.0 37.0 8 35.8894556097035 37.0 35.0 37.0 35.0 37.0 9 37.69597170527945 39.0 37.0 39.0 35.0 39.0 10 37.0690934651914 39.0 37.0 39.0 33.0 39.0 11 36.788189229864074 39.0 37.0 39.0 32.0 39.0 12 36.17036658488971 38.0 35.0 39.0 32.0 39.0 13 35.932828187517146 38.0 35.0 39.0 31.0 39.0 14 36.94129543259586 39.0 35.0 41.0 31.0 41.0 15 37.159566555710086 39.0 35.0 41.0 32.0 41.0 16 37.25195138738013 39.0 35.0 41.0 32.0 41.0 17 37.16384557318139 39.0 35.0 41.0 32.0 41.0 18 37.08670075185108 39.0 35.0 41.0 32.0 41.0 19 37.05699185032121 38.0 35.0 41.0 32.0 41.0 20 36.899969789573674 38.0 35.0 41.0 32.0 41.0 21 36.72018484657703 38.0 35.0 41.0 31.0 41.0 22 36.65892507972857 38.0 35.0 41.0 31.0 41.0 23 36.603660219132635 38.0 35.0 40.0 31.0 41.0 24 36.51072906243012 38.0 35.0 40.0 31.0 41.0 25 36.41499134919288 38.0 35.0 40.0 31.0 41.0 26 36.29406916205317 38.0 35.0 40.0 30.0 41.0 27 36.21887771041443 38.0 35.0 40.0 30.0 41.0 28 36.23649094400842 38.0 35.0 40.0 30.0 41.0 29 36.271500149862746 38.0 35.0 40.0 30.0 41.0 30 36.298501213967526 38.0 35.0 40.0 30.0 41.0 31 36.20968890397208 38.0 35.0 40.0 30.0 41.0 32 36.089449821354094 38.0 35.0 40.0 30.0 41.0 33 35.963688811992824 38.0 35.0 40.0 30.0 41.0 34 35.878700777224665 38.0 35.0 40.0 29.0 41.0 35 35.733011590971444 38.0 35.0 40.0 29.0 41.0 36 35.625453354626 38.0 35.0 40.0 28.0 41.0 37 35.587329541039395 38.0 34.0 40.0 28.0 41.0 38 35.514026042814756 38.0 34.0 40.0 28.0 41.0 39 35.46474538398959 38.0 34.0 40.0 27.0 41.0 40 35.357057900938344 38.0 34.0 40.0 27.0 41.0 41 35.28400219164352 38.0 34.0 40.0 27.0 41.0 42 35.258189325015024 38.0 34.0 40.0 27.0 41.0 43 35.205024921619405 38.0 34.0 40.0 27.0 41.0 44 35.08725143796872 37.0 34.0 40.0 27.0 41.0 45 35.01213412477778 37.0 34.0 40.0 26.0 41.0 46 34.973392226484634 37.0 34.0 40.0 26.0 41.0 47 34.93450839469248 37.0 34.0 40.0 26.0 41.0 48 34.82166650543867 37.0 34.0 40.0 26.0 41.0 49 34.759356509990056 37.0 34.0 40.0 26.0 41.0 50 34.67638250364349 37.0 34.0 40.0 26.0 41.0 51 34.251441933340416 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 3.0 10 3.0 11 2.0 12 2.0 13 9.0 14 20.0 15 60.0 16 190.0 17 461.0 18 992.0 19 2057.0 20 3500.0 21 5732.0 22 8839.0 23 13041.0 24 18845.0 25 26551.0 26 35266.0 27 41742.0 28 46636.0 29 53678.0 30 64306.0 31 77720.0 32 96365.0 33 124472.0 34 205394.0 35 307790.0 36 179019.0 37 228596.0 38 349485.0 39 631340.0 40 189.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.71538765289568 23.53792637536732 28.426544260256875 13.32014171148012 2 30.67884651676163 26.140899525355348 29.671515136137224 13.508738821745798 3 29.081420667103302 25.635330816062112 31.223506407623493 14.059742109211088 4 25.89727344955493 28.598569246896098 30.81578459093814 14.688372712610832 5 23.074343022343026 32.36833090962721 29.765714575698134 14.791611492331628 6 21.636691474633547 41.048317651928315 27.351972875636122 9.963017997802014 7 88.37406058260926 3.7017287341593494 6.2234271151659515 1.7007835680654386 8 88.77559758760627 3.2335860648263415 6.0202798389411605 1.9705365086262263 9 83.53492119122646 6.060600053601702 7.696680976312171 2.707797778859679 10 42.863678821143175 31.134579916489187 14.557222987834951 11.44451827453269 11 36.255048947234044 23.754156907086685 24.837926216782407 15.152867928896868 12 36.033386882173 22.130088791693954 26.227288657848284 15.609235668284763 13 22.991958158956006 34.207400523647394 25.940131022856843 16.86051029453976 14 17.668381498215126 36.52587233597166 27.559917345542257 18.245828820270958 15 16.825899136822304 27.49101219993752 39.5248320189287 16.158256644311482 16 19.45067771263462 23.960158711783016 39.30301136895256 17.2861522066298 17 19.34735964045628 25.00091186326174 28.197904458932054 27.453824037349918 18 21.82568504718694 26.480231597409993 32.26374415812819 19.430339197274876 19 25.984257275479443 28.27489743520617 26.357764396735057 19.383080892579336 20 28.295156658108368 25.806681816812223 27.943692840049668 17.95446868502974 21 23.24977758465659 28.248334461929314 29.38748955321872 19.114398400195377 22 22.749759347391358 25.58145159116175 28.287306704811627 23.38148235663527 23 20.42966203968746 29.450249533363888 28.092009381883575 22.028079045065073 24 19.86950047337597 25.805888892236794 35.44912040876847 18.87549022561876 25 18.89523404754693 28.16935917421663 31.88587595170772 21.04953082652872 26 18.59019596337957 33.755988562855926 27.499456846665833 20.154358627098674 27 18.173950207508362 33.253314028263006 29.765437052096733 18.807298712131903 28 16.64642065917406 29.82562002737176 34.623606633289825 18.904352680164358 29 17.33979355415754 26.535974195062618 34.965793233816015 21.15843901696383 30 19.522833848998616 30.619178942460636 30.828074921857286 19.029912286683466 31 24.840899683940265 29.245992162733497 27.185379422338592 18.72772873098765 32 26.217297808197888 28.238224673592597 26.80398270155746 18.74049481665205 33 24.437142490132054 28.932271554465196 26.815757631502574 19.814828323900173 34 19.183541423172745 29.29309188251395 28.41659305683525 23.106773637478057 35 19.78671914770123 27.579819752385514 30.91589131858599 21.717569781327263 36 25.53518444218549 28.007285390999037 27.435031724912264 19.02249844190321 37 19.871839600873486 31.605339236921104 30.302564159492018 18.22025700271339 38 19.51351698523733 31.374756770386487 27.314864005506067 21.796862238870116 39 19.916877716757828 31.216449378902176 28.757550624269516 20.109122280070473 40 23.299652540451046 28.370643077689163 27.437251913723465 20.892452468136327 41 18.253361603737527 26.947779573311426 30.0761445469784 24.722714275972642 42 21.430531085022132 26.054946501378893 27.937864844420268 24.576657569178707 43 21.324001668313304 27.80120429384516 27.525663003883743 23.349131033957786 44 19.54388599647624 30.444933767010212 28.564949244897925 21.446230991615618 45 18.35097061897278 33.9584618531916 25.85362295167759 21.836944576158025 46 20.931028248730925 32.6322558545586 26.122781198806805 20.313934697903665 47 19.885596842257172 29.470270878893455 28.942024526742966 21.702107752106404 48 21.341208131600105 26.552585964917846 31.196943434346636 20.909262469135413 49 20.093739543307162 26.985324551957966 30.85158513551874 22.069350769216133 50 18.681421935782623 31.278575019387006 29.70021900576773 20.339784039062636 51 18.026149066648482 31.778117501906983 27.84917623065859 22.346557200785945 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1183.0 1 2379.0 2 3575.0 3 11339.0 4 19103.0 5 14085.0 6 9067.0 7 9278.0 8 9489.0 9 9994.5 10 10500.0 11 10620.5 12 10741.0 13 10807.0 14 10873.0 15 10515.5 16 10158.0 17 9405.5 18 8653.0 19 9016.0 20 9379.0 21 10218.5 22 11058.0 23 12465.0 24 13872.0 25 18008.0 26 25005.0 27 27866.0 28 32629.5 29 37393.0 30 47506.0 31 57619.0 32 66035.5 33 74452.0 34 85054.0 35 95656.0 36 101971.0 37 108286.0 38 121375.0 39 134464.0 40 155268.0 41 176072.0 42 204060.5 43 232049.0 44 230387.0 45 228725.0 46 225424.5 47 222124.0 48 212798.5 49 203473.0 50 189858.5 51 176244.0 52 162421.5 53 148599.0 54 130002.5 55 111406.0 56 100831.0 57 90256.0 58 80426.0 59 70596.0 60 63768.5 61 56941.0 62 48742.0 63 40543.0 64 34546.5 65 28550.0 66 23674.0 67 18798.0 68 15977.0 69 13156.0 70 10328.5 71 7501.0 72 6271.5 73 5042.0 74 4253.5 75 2551.5 76 1638.0 77 1234.0 78 830.0 79 604.5 80 379.0 81 255.0 82 131.0 83 139.0 84 147.0 85 94.0 86 41.0 87 33.0 88 25.0 89 28.5 90 32.0 91 19.5 92 7.0 93 5.5 94 4.0 95 3.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2522308.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.699206392015192 #Duplication Level Percentage of deduplicated Percentage of total 1 78.62382476571084 13.915793018579514 2 8.059244074347797 2.8528444847101415 3 2.694307652479371 1.43061321674455 4 1.330833275921208 0.9421877129556465 5 0.7689082666461573 0.6804533053948494 6 0.5443070011769712 0.5780281172670041 7 0.42013994509650504 0.5205300521255081 8 0.33737391481281265 0.47770004396432975 9 0.2620139938664829 0.4173695779535174 >10 3.74993144635896 16.768753646182443 >50 1.7198440778843451 21.968674647313122 >100 1.4844997360836028 38.15922929317622 >500 0.003862925878828048 0.4272365788962067 >1k 4.544618680974174E-4 0.20209581181901895 >5k 2.272309340487087E-4 0.2203548165087373 >10k+ 2.272309340487087E-4 0.43813567640923234 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10894 0.43190601623592356 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 5479 0.21722168743864745 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3570 0.1415370367139937 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.028347053571570167 0.0 2 0.0 0.0 0.0 0.09427873201845294 0.0 3 0.0 0.0 0.0 0.15180540996579323 0.0 4 0.0 0.0 0.0 0.2998047819695295 0.0 5 0.0 0.0 0.0 0.5246781915610623 0.0 6 0.0 0.0 0.0 0.8570721735807046 0.0 7 0.0 0.0 0.0 1.0147848716334404 0.0 8 0.0 0.0 0.0 1.44157652435785 0.0 9 0.0 0.0 0.0 1.5894173114465007 0.0 10 0.0 0.0 0.0 1.8579808651441458 0.0 11 0.0 0.0 0.0 2.154772533727047 0.0 12 0.0 0.0 0.0 2.4203229740380636 0.0 13 0.0 0.0 0.0 2.5320460467159442 0.0 14 0.0 0.0 0.0 2.5806523231897134 0.0 15 0.0 0.0 0.0 2.6459496619762537 0.0 16 0.0 0.0 0.0 2.796288161477504 0.0 17 0.0 0.0 0.0 2.958361944695097 0.0 18 0.0 0.0 0.0 3.166742523117716 0.0 19 0.0 0.0 0.0 3.282192341300111 0.0 20 0.0 0.0 0.0 3.411795863153905 0.0 21 0.0 0.0 0.0 3.5834243875054117 0.0 22 0.0 0.0 0.0 3.7706735259928603 0.0 23 0.0 0.0 0.0 3.96961830196788 0.0 24 0.0 0.0 0.0 4.121701235535073 0.0 25 0.0 0.0 0.0 4.25610195107021 0.0 26 0.0 0.0 0.0 4.38419891623069 0.0 27 0.0 0.0 0.0 4.511384018129427 0.0 28 0.0 0.0 0.0 4.653238224673593 0.0 29 0.0 0.0 0.0 4.810514814209843 0.0 30 0.0 0.0 0.0 5.014851477297777 0.0 31 3.96462287714268E-5 0.0 0.0 5.190087808467483 0.0 32 7.92924575428536E-5 0.0 0.0 5.357434540111676 0.0 33 7.92924575428536E-5 0.0 0.0 5.529538819208439 0.0 34 7.92924575428536E-5 0.0 0.0 5.714012721681888 0.0 35 7.92924575428536E-5 0.0 0.0 5.943881556098621 0.0 36 7.92924575428536E-5 0.0 0.0 6.140526850804898 0.0 37 7.92924575428536E-5 0.0 0.0 6.33899587203466 0.0 38 7.92924575428536E-5 0.0 0.0 6.546385294737994 0.0 39 7.92924575428536E-5 0.0 0.0 6.818794532626468 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAATCGA 20 7.0348906E-4 45.000004 21 CGTACGT 35 1.212702E-7 45.0 38 GCTACGA 670 0.0 41.977608 10 CGTAAGG 255 0.0 41.47059 2 CGGTCTA 415 0.0 41.20482 31 CGTTTTT 7255 0.0 41.061337 1 GCGTTAG 265 0.0 40.75472 1 CGTTAGG 420 0.0 40.714287 2 TAATGCG 240 0.0 40.312504 1 CACGACG 435 0.0 39.827587 26 CGACGGT 430 0.0 39.76744 28 TGTAGCG 280 0.0 39.375 1 CGAACCC 190 0.0 39.078945 19 CTAAGCG 110 0.0 38.863636 1 ATAACGG 210 0.0 38.57143 2 TTGCGAG 175 0.0 38.571426 1 ACGGGTA 380 0.0 38.486843 5 GGCGATA 845 0.0 38.343193 8 AGGGATG 5130 0.0 38.245617 6 TAACGGG 795 0.0 38.20755 3 >>END_MODULE